prot_H-elongata_contig72224.14893.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig72224.14893.1
Unique Nameprot_H-elongata_contig72224.14893.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length294
Homology
BLAST of mRNA_H-elongata_contig72224.14893.1 vs. uniprot
Match: A0A6H5K8Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z3_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 1.080e-107
Identity = 194/310 (62.58%), Postives = 220/310 (70.97%), Query Frame = 0
Query:    6 QDPQTREPMDFFRNTPVEKKQMVRTYERFSQVISHLLQPNGRVLVVGEWGGRSVKAETANSNGVEDIDGV--------GNDYGFFNRVSGFGQNSSPSSPRRVFNLHFFVEARTPGEERKLKKWQNRPGAKWIAFGPIPPRAHGCKEAYSYVTGSEA-GERAEQRRKQKRARGKISKA-----AVVDAAEG-----GVAEATESTASSGA-----------GGLMSYTRYGECPTWYGTGRMCGLDVQARRVGSFESLPKKLKERVLQVDPDFDAGPAGTLEECRLLAARER-DKKEEQRRKKKWSLRRP 284
            QDP T EPMD FRNTPVEKKQ VRTYERFSQV+SHLLQPNGRVLVV EWGGRSVKAETAN+NGVE+I+G           D G  N      ++SS S PRRVFNLHFFVEARTP EER+LK+WQ RPGA+WIAFG  PPRAHGCKE YSYVTG E  G R    RK++  + ++  A     A  DA EG     GV + T + AS              GGLMSYTRYGECPTWYGTGRMCGLDVQARRV SF SLP KL+E VL+VDP+F+AGP GT+ E R  A  +R +++EE+RRK K SLRRP
Sbjct:  323 QDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWGGRSVKAETANNNGVEEIEGGRGGWFPGGARDLGIVNDERSLARSSS-SPPRRVFNLHFFVEARTPKEERELKRWQERPGARWIAFGSPPPRAHGCKEVYSYVTGREREGGRGGNERKEEGKKDRLPWAWNRNKAASDAREGDDDAEGVDDGTVALASXXXXXXXXXXXXXXGGLMSYTRYGECPTWYGTGRMCGLDVQARRVDSFASLPAKLREEVLKVDPEFEAGPPGTMGEVRRAAREQRLEREEERRRKGKRSLRRP 631          
BLAST of mRNA_H-elongata_contig72224.14893.1 vs. uniprot
Match: D7FYF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF1_ECTSI)

HSP 1 Score: 323 bits (829), Expect = 4.050e-106
Identity = 194/310 (62.58%), Postives = 223/310 (71.94%), Query Frame = 0
Query:    6 QDPQTREPMDFFRNTPVEKKQMVRTYERFSQVISHLLQPNGRVLVVGEWGGRSVKAETANSNGVEDIDGVGNDY---GFFNRVSGFGQNS---SPSSP-RRVFNLHFFVEARTPGEERKLKKWQNRPGAKWIAFGPIPPRAHGCKEAYSYVTGSE--AGERAEQRRKQKRAR----GKISKAAVVDAAEGG-----VAEATESTASSGAGG------------LMSYTRYGECPTWYGTGRMCGLDVQARRVGSFESLPKKLKERVLQVDPDFDAGPAGTLEECRLLAARER-DKKEEQRRKKKWSLRRP 284
            QDP T EPMD FRNTPVEKKQ VRTYERFSQV+SHLLQPNGRVLVV EW GRSVKAETAN+NGVE+I+G    +   G  +  SG  + S   SPSSP RRVFNLHFFVEARTP EER+LK+WQ RPGA+WIAFG  PPRAHGCKE YSYVTGSE   G    +R++ K+AR       SKAA  DA EG      V + + + ASS                LMSYTRYGECPTWYGTGRMCGLDVQARRV SF SLP KL+E+VL+VDP+F+ GP GT+ E R  A  +R +++EE+RRK + SLRRP
Sbjct:   89 QDPATGEPMDHFRNTPVEKKQAVRTYERFSQVVSHLLQPNGRVLVVSEWDGRSVKAETANNNGVEEIEGGRGGWFPGGARDLGSGKDERSLSRSPSSPPRRVFNLHFFVEARTPKEERELKRWQERPGARWIAFGSPPPRAHGCKEVYSYVTGSEREGGGGGNERKEGKKARLPWAWNRSKAAS-DAREGDDNAEVVDDGSVALASSSXXXXXXXXXXXXXXXLMSYTRYGECPTWYGTGRMCGLDVQARRVDSFSSLPAKLREKVLEVDPEFEVGPPGTMGEVRRAAREQRLEREEERRRKGRRSLRRP 397          
BLAST of mRNA_H-elongata_contig72224.14893.1 vs. uniprot
Match: A0A835YPS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPS0_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 5.610e-18
Identity = 51/125 (40.80%), Postives = 64/125 (51.20%), Query Frame = 0
Query:  124 RPGAKWIAFGPIPPRAHGCKEAYSYVTGSEAGERAEQRRKQKRARGKISKAAVVDAAEGGVAEATESTASSGAGGLMSYTRYGECPTWYGTGRMCGLDVQARRVGSFESLPKKLKERVLQVDPDF 248
            R G KWI  GP PP  +GCKE+Y+YV                             A EGG     ++       GLM+Y RYGECP+WY  G+MC LD+QARRV SF +LPK L+  V ++ P F
Sbjct:  152 RRGNKWIGIGPSPPPEYGCKESYTYV-----------------------------AREGGQDGEPDT-------GLMTYHRYGECPSWYAPGKMCSLDMQARRVESFSALPKPLQSAVRKLVPSF 240          
BLAST of mRNA_H-elongata_contig72224.14893.1 vs. uniprot
Match: A0A7S2K1Q5_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1Q5_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.000e-5
Identity = 42/146 (28.77%), Postives = 66/146 (45.21%), Query Frame = 0
Query:  125 PGAKWIAFGP----IPPRAHGCKEAYSYVTGSEAGERAEQR------------------RKQKRARGKISKAAVVDAAEGGVAEATESTASSGAGGLMSYTRYGECPTWYGTGRMCGLDVQARRVGSFESLPKKLKERVLQVDPDF 248
            P +K + FG     I    +G +E+YSY   + AG R   R                  ++ +   G ++  A+++ AE      T++T        + Y+RYGECP WYG G+MC L++  +R+ SF   P  L  R+    P F
Sbjct:    1 PRSKLVQFGKDDRSIEQTRYGARESYSYTFSTTAGARIGIRSVLQFGTNLRRLLYQQYSKRFQNNSGDVNNNALLETAEDTTTLYTDAT--------VRYSRYGECPPWYGPGKMCTLELVGKRIDSFRDAPP-LAARIASEVPGF 137          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig72224.14893.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K8Z3_9PHAE1.080e-10762.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF1_ECTSI4.050e-10662.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YPS0_9STRA5.610e-1840.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2K1Q5_9STRA2.000e-528.77Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 256..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig72224contigH-elongata_contig72224:199..1433 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig72224.14893.1mRNA_H-elongata_contig72224.14893.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig72224 199..1433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig72224.14893.1 ID=prot_H-elongata_contig72224.14893.1|Name=mRNA_H-elongata_contig72224.14893.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=294bp
MYVQPQDPQTREPMDFFRNTPVEKKQMVRTYERFSQVISHLLQPNGRVLV
VGEWGGRSVKAETANSNGVEDIDGVGNDYGFFNRVSGFGQNSSPSSPRRV
FNLHFFVEARTPGEERKLKKWQNRPGAKWIAFGPIPPRAHGCKEAYSYVT
GSEAGERAEQRRKQKRARGKISKAAVVDAAEGGVAEATESTASSGAGGLM
SYTRYGECPTWYGTGRMCGLDVQARRVGSFESLPKKLKERVLQVDPDFDA
GPAGTLEECRLLAARERDKKEEQRRKKKWSLRRPSLQGSAGNV*
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