prot_H-elongata_contig7205.14880.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7205.14880.1
Unique Nameprot_H-elongata_contig7205.14880.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length416
Homology
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BLAST of mRNA_H-elongata_contig7205.14880.1 vs. uniprot
Match: A0A6H5JAE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAE9_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 3.900e-18
Identity = 56/100 (56.00%), Postives = 70/100 (70.00%), Query Frame = 0 
Query:  318 LEFDDDDG--------VARRSGICDGDIEGDDAFVVAAQKKKLSSWLSSLEIRPSDALRYADNLVADGFDSGEALKGVREDDLIQYGMKKGHARLVVRTL 409
            L+F D+ G        VA  +G  DG  +G +A VV    ++L++WLS L+IR  DA RYA  LVADGFDS EAL+GVRE++L+QYGMKKGHARLVVR L
Sbjct:  415 LDFGDETGDQHTTSAAVANGTGGNDGAEDGGEAVVV----QRLATWLSGLKIREPDASRYAGRLVADGFDSEEALRGVREEELLQYGMKKGHARLVVRLL 510
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BLAST of mRNA_H-elongata_contig7205.14880.1 vs. uniprot
Match: D8LG39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG39_ECTSI)

HSP 1 Score: 92.0 bits (227), Expect = 2.910e-16
Identity = 45/64 (70.31%), Postives = 54/64 (84.38%), Query Frame = 0 
Query:  346 AAQKKKLSSWLSSLEIRPSDALRYADNLVADGFDSGEALKGVREDDLIQYGMKKGHARLVVRTL 409
            AA  ++L++WLS L+IR  DA RYA  LVADGFDS EAL+GVRE++L+QYGMKKGHARLVVR L
Sbjct:  821 AAVVERLAAWLSGLKIREPDASRYAGRLVADGFDSEEALRGVREEELLQYGMKKGHARLVVRLL 884
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BLAST of mRNA_H-elongata_contig7205.14880.1 vs. uniprot
Match: A0A7S2BLB3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BLB3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.530e-9
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0 
Query:  352 LSSWL-SSLEIRPSDALRYADNLVADGFDSGEALKGVREDDLIQYGMKKGHARLVVRTLAR 411
            LS WL +S  IR  DA RYA  LV DGFD   AL+   EDDLI YG K+GHARLV+R L++
Sbjct:   68 LSRWLETSCHIRSVDAERYAKLLVDDGFDCIHALEMTSEDDLIGYGFKRGHARLVLRELSK 128
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7205.14880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JAE9_9PHAE3.900e-1856.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG39_ECTSI2.910e-1670.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2BLB3_9STRA4.530e-959.02Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..85
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 351..407
e-value: 4.8E-5
score: 23.7
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 347..415
score: 8.674
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 345..408
e-value: 2.3E-6
score: 29.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7205contigH-elongata_contig7205:153..2011 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7205.14880.1mRNA_H-elongata_contig7205.14880.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7205 139..3065 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7205.14880.1 ID=prot_H-elongata_contig7205.14880.1|Name=mRNA_H-elongata_contig7205.14880.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=416bp
MTGGDTLSEEEDEEKWDPQWTRFRRRQALARKEEKETEGLGRRRRRGAWG
VTAQRRDEDEAREIVVAANDKLREVTKERDMHREKTLSLQRALEAVLKEC
ETMAATATSVAEKNSVAAEGAIAMGDDEGAETSRGPASEPDSVSIPAGDV
PTSVGRETRTILESRAAQRKSDPGLNVARIADTKDPLERVGDLSASSEIS
ESETDAEVDDDVNEDIISVHGSGDVNDDDDAVTTVTTENTDNTPVGIGEA
RGGVRFSNSDMPQHSLLSFVEDVDDTPRDGGGGGGTTSSGDAAKQSSWGR
APEAKSSSRGGGDSGNLLEFDDDDGVARRSGICDGDIEGDDAFVVAAQKK
KLSSWLSSLEIRPSDALRYADNLVADGFDSGEALKGVREDDLIQYGMKKG
HARLVVRTLARGFRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001660SAM
IPR013761SAM/pointed_sf