prot_H-elongata_contig71904.14869.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71904.14869.1
Unique Nameprot_H-elongata_contig71904.14869.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length371
Homology
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5L5U2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5U2_9PHAE)

HSP 1 Score: 404 bits (1037), Expect = 7.830e-136
Identity = 213/416 (51.20%), Postives = 273/416 (65.62%), Query Frame = 0
Query:    6 VELDCEVHMLDVQTAILNADVEEDVFVKMAPDYETNDKP-GVPLVMKLKKSLCGTRQSPKNWFGTMD----------------------------------------------------LVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEF 368
            VE +     +DV TA L AD++E+VFV+  P +E  DK  G  +VMKL KSL G  QSP NWF T+D                                                    L  RF+M+++   S +L M +  DRE  T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR M+KP KVH+ AAKH LRYLAG+ DFSITYK+GGF+LA FSD+NW NNPDNG+STSSY+ MLANAP+SF+  LQGLTA ST EAELVA+AL +KEAVFCSNM+ +LGF + F  +P+Y DNT+ LHA G+R++S R KHIALR+FF+++LV  GKISIHY   +D LAD+GTKH  KHR  +L+ LIN F
Sbjct:   20 VEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKEDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVIVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYFPTEDNLADIGTKHFNKHRFEHLMDLINNF 435          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5JME8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME8_9PHAE)

HSP 1 Score: 400 bits (1029), Expect = 1.030e-131
Identity = 213/428 (49.77%), Postives = 274/428 (64.02%), Query Frame = 0
Query:    4 IAVELDCEVHMLDVQTAILNADVEEDVFVKMAPDYETNDKPGVPLVMKLKKSLCGTRQSPKNWFGTMD-----------------------------------------------------------------LVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLIN 366
            I VE +     +DV TA L AD++E+VFV+  P +E  DK G  +VMKL KSL G  QSP NWF T+D                                                                 L  RF+M+++   S  L M +  DRE  T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR+M+KP KVH+ AAKH LRYLAG+ DFSITYK+GGF+LA FSD+NW NNPDNG+STSSY+ MLANAP+SF+  LQGLTA ST EAELVA+AL +KEAVFCSNM+ +LG  + F  +P+Y DNT+ LHA G+R++S R KHIALR+FF+++LV  GKISIHYV  +D LAD+GTKH  KHR ++L+ LIN
Sbjct:  227 ITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAIKHLLSSGWKLGGIARQXGKLQKRFKMTDLGEASFALGMKIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARSMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGSGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLIN 654          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5KJH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH6_9PHAE)

HSP 1 Score: 403 bits (1035), Expect = 1.280e-124
Identity = 211/417 (50.60%), Postives = 274/417 (65.71%), Query Frame = 0
Query:    4 IAVELDCEVHMLDVQTAILNADVEEDVFVKMAPDYETNDKPGVPLVMKLKKSLCGTRQSPKNWFGTMD----------------------------------------------------LVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEF 368
            I VE +     +DV TA L AD++E+VFV+  P +E  DK G  +VMKL KSL G  QSP NWF T+D                                                    L  RF+M+++   S +L M +  DRE  T+TISQ+ Y + +++R+G+    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR M+KP KVH+ AAKH LRYLAG+ DFSITYK+GGF+LA FSD+NW NNPDNG+STSSY+ +LANAP+SF+  LQGLTA ST EAELVA+AL + EAVF SNM+ +LGF + F  +P+Y DNT+ LHA G+R++S R KHIALR+FF+++LV  GKISIHYV  +D LAD+GTKH  KHR ++L+ LIN F
Sbjct: 1248 ITVEFNLIFDQMDVSTAFLYADIQEEVFVEQPPGFEVKDKDGGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLGMEIRRDREANTLTISQEAYCKSILERFGISGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTVLANAPMSFRSGLQGLTAMSTMEAELVASALAMNEAVFFSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVPTEDNLADIGTKHFNKHRFKHLMDLINNF 1664          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5KNH5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH5_9PHAE)

HSP 1 Score: 378 bits (970), Expect = 2.800e-119
Identity = 196/376 (52.13%), Postives = 251/376 (66.76%), Query Frame = 0
Query:   45 GVPLVMKLKKSLCGTRQSPKNWFGTMD----------------------------------------------------LVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEF 368
            G  +VMKL KSL G  QSP NWF T+D                                                    L  RF+M+++   S +L M +  DRE  T+TISQ+ Y + +++R+GM    P  TPG G E+S  QPE+ LL+E+E R+YQ I G++MY+AQV RYDI+YA  QLAR M+KP KVH+ AAKH LRYLAG+ DFSITYK+GGF+LA FSD+NW NNPDNG+STSSY+ MLANAP+SF+  LQGLTA ST EAELVA+AL +KEAVFCSNM+ +LGF + F  +P+Y DNT+ LHA G+R++S R KHIALR+FF+++LV  GKISIHYV+ +D LAD+GTKH   HR ++L+ LIN F
Sbjct:  620 GGDMVMKLNKSLYGLAQSPGNWFNTIDPVLVEIGFVALKSDPCVYLYDHNGAKIYLTLYVDDLLLAGNDSDAISMVKGKLQKRFKMTDLGEASLVLRMEIRRDREANTLTISQEAYCKSILERFGMSGSKPTSTPGYGSEISNIQPEDTLLDEKETRKYQGIVGSLMYIAQVLRYDIMYATGQLARPMAKPSKVHMVAAKHTLRYLAGTIDFSITYKKGGFKLATFSDSNWANNPDNGKSTSSYLTMLANAPMSFRSGLQGLTAMSTMEAELVASALAMKEAVFCSNMMTELGFGKEFAQLPVYCDNTATLHALGNRSFSSRTKHIALRFFFIRELVTEGKISIHYVRTEDNLADIGTKHFNNHRFKHLMDLINNF 995          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5JG39_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG39_9PHAE)

HSP 1 Score: 369 bits (946), Expect = 2.520e-118
Identity = 198/406 (48.77%), Postives = 263/406 (64.78%), Query Frame = 0
Query:    1 MLAIAVELDCEVHMLDVQTAILNADVEEDVFVKMAPDYETNDKPGVPLVMKLKKSLCGTRQSPKNWFGTMD-------------------------------LVDRFEMSN-----MSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEFKA 370
            +L I VE D  +  +DV  A L AD++EDV+V+  P +E   + G  LVM L+KSL    QSP NWF T+D                                VD   ++      +S  S I  M +  DRE+GT++IS++ Y++ ++ R+GM +  P  TPG+GP  S  QPEE LLN+EE RRYQ I G ++YL+Q+ RYDI+YA +QLAR M+KP K H+GAAK   RYLAG+  F I YK+GGF+L AF+D+NWGNNPDNG+STSS++ ML +AP++FK  LQ LT QST E ELVAAAL IKEAVFCSN++ +LGF +    VPLY DNT+ LH+ G+R+YS   KHIALR+FF+++LV  G+I+IHYV  D   AD+GTKHL K R + L+ +I  F  
Sbjct:  315 LLCITVEFDLIIVQMDVTAAFLYADIQEDVYVEQPPGFEVKGENGEDLVMLLQKSLYWLAQSPGNWFHTIDPFLISIGFVPLKPDPCVYFYDHDGSQMYLTLSVDDLLLAGNNSDALSIASLISGMEIKRDRERGTLSISREAYSKSILDRFGMSACKPTSTPGLGPGPSNVQPEETLLNQEETRRYQGIVGCLIYLSQILRYDIMYATSQLARPMAKPSKNHMGAAKRTFRYLAGTTYFKIPYKRGGFKLTAFTDSNWGNNPDNGKSTSSHLTMLCDAPMAFKSGLQSLTTQSTMEVELVAAALAIKEAVFCSNILTELGFGKELAQVPLYGDNTATLHSLGNRSYSSTTKHIALRFFFIRELVSEGRIAIHYVPADSNPADIGTKHLNKDRFQLLLNIIKNFNV 720          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5L6R7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R7_9PHAE)

HSP 1 Score: 364 bits (935), Expect = 2.460e-116
Identity = 203/383 (53.00%), Postives = 260/383 (67.89%), Query Frame = 0
Query:    3 AIAVELDCEVHMLDVQTAILNADVEEDVFVKMAPDYETNDKPGVPLVMKLKKSLCGTRQSPKNWFGTMD--LVD-RFEMSNMSNVSRILDMNVTCDREKGTITISQKD--------------YTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEF 368
            AIA E D +V  LDV+TA L AD+EE+VFV+MAP YE  +   + LVMKL+KSL G  QSP++W  T+D  LV+  F          I D N T       +T+   D              YT  ++ R+GM S  P  T G GPELS  QPEE LLN E K+RYQAI G+VMYLAQVTRYDI+Y  +Q ARAMS P K+H+GAAKHLLRYL+GS DFSITYK+GGF L A S+ N G+N DNG+S SSYI+M++ AP S K  LQ LTA ST EAELVA+AL +KE +FC+NM+ +LGF   F S PL+ID+T+ L+  G++T+S   KH+ALR+F+++K+V  G+ISIHY+  +D LAD+GT++L K RH+ LI  I  F
Sbjct:  398 AIAAEKDLDVIQLDVKTAFLYADIEENVFVEMAPGYEAKNMEELQLVMKLEKSLDGLAQSPQDWLKTIDSSLVEIGFFPLKSDTCVYIYDHNNTV----VVLTLYVDDLLIIRGGAHHQPGNYTTSILDRFGMGSCKPLSTAGFGPELSVKQPEETLLNAEGKQRYQAIIGSVMYLAQVTRYDIMYCASQFARAMSNPSKIHMGAAKHLLRYLSGSRDFSITYKRGGFDLTASSNANGGHNTDNGKSMSSYIMMMSTAPASLKSGLQSLTAMSTVEAELVASALAMKEVIFCTNMMKELGFGSEFSSAPLFIDSTATLNVIGNQTFSGHTKHMALRFFYIRKIVKEGRISIHYIPTEDNLADIGTEYLNKQRHQYLIDKIKNF 776          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 4.420e-98
Identity = 181/421 (42.99%), Postives = 253/421 (60.10%), Query Frame = 0
Query:    3 AIAVELDCEVHMLDVQTAILNADVEEDVFVKMAP-DYETNDKPGVPLVMKLKKSLCGTRQSPKNW----------FGTM------------------------------------------DLVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEFKA 370
            AIA E   EV+ LDV  A LNA  + DV+V+ AP D E +   G  +V KL+KSL G  QSP  W          FG                                            +L+D FEM++M  V R++ + V  D E GT+ ISQ  Y  D++QRYGM+  NP  TPG G ELS  QP+++LL  E+K+R+QAITG+++YLAQ TRYD+ YAV+QL RA + P +VH+ AAKHLLRYL G+ D  I YK+G FRL+ F+D+++G NPDNGRST+ Y+  L    IS+  + Q L AQ+T EAEL A + + +EAV+ SN + ++GF ++F SVP+  D+T AL  A +  +S R KHIALR+FF+++L  G +I++H+  +   LAD+ TKHL K R   +++LI ++K 
Sbjct:  315 AIACEHGWEVYQLDVVAAFLNAYTDRDVYVRPAPGDEERDPTTGEMMVYKLEKSLYGLSQSPSLWNDAINDRLIIFGWQRTRSDPCVYIFVSGDELTILAIYVDDILITGGNKEIVSRKKKELMDSFEMTDMGEVKRVIGIEVQRDYEHGTLAISQGPYARDILQRYGMEQANPVSTPGYGVELSTEQPQDQLLGPEDKQRFQAITGSLLYLAQCTRYDLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKKGKFRLSCFTDSSFGANPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGF-KTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHHQPSATMLADIATKHLPKQRFATIMQLIKDYKC 734          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 5.790e-95
Identity = 170/412 (41.26%), Postives = 251/412 (60.92%), Query Frame = 0
Query:   12 VHMLDVQTAILNADVEEDVFVKMAPDYET-NDKPGVPLVMKLKKSLCGTRQSPKNWFGTMD----------------------------------------------------LVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEFKA 370
            ++ LDV  A LNA  +  V+V+ AP     N   G P+V KL++SL G  QSP  W  T+D                                                    L DRFEM++M  V RIL ++V  D E+GT+ ISQ+ Y    ++R+GM+  NP  T G G E+S NQP++++L   +K+ YQ++TG+++YLAQ T++D+ YA  QL++A S P +V++ AAKH+LRYL G+    I YK+G FRLAAF+D+++G NPDNGRST+ Y+  LA   IS+  + Q LTAQST EAE+ A + + +EAV+ SN + +L F ++FGSVP+  D+T AL  AG+  +S R KH+ALRYFF+++LV+ G+I++H+  ++ QLAD+ TK+L KHR  ++I+ I +F  
Sbjct:   83 IYQLDVVGAFLNALCDRYVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFSC 493          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 1.350e-94
Identity = 172/412 (41.75%), Postives = 253/412 (61.41%), Query Frame = 0
Query:   12 VHMLDVQTAILNADVEEDVFVKMAPDYET-NDKPGVPLVMKLKKSLCGTRQSPKNWFGTMD----------------------------------------------------LVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEFKA 370
            ++ LDV  A LNA  + DV+V+ AP     N   G P+V KL++SL G  QSP  W  T+D                                                    L DRFEM++M  V RIL ++V  D E+GT+ ISQ+ Y   +++R+GM+  NP  TPG G E+S NQP++++L   +K+ YQ++TG+++YLAQ TR+D+ YA  QL++A S P +V++ AAKH+LRYL G+    I YK+G FRLAAF+D+++G NPDNGRST+ Y+  LA   IS+  + Q LTAQST EAE+ A + + +EAV+ SN + +L F ++FGSVP+  D+T AL  AG+  +S R KH+ LRYFF+++LV+ G+I++H+  ++ QLAD+ TK+L KHR  ++I+ I +F  
Sbjct:  447 IYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSPALWNDTLDESLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVTLRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFSC 857          
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 1.460e-94
Identity = 171/412 (41.50%), Postives = 252/412 (61.17%), Query Frame = 0
Query:   12 VHMLDVQTAILNADVEEDVFVKMAPDYET-NDKPGVPLVMKLKKSLCGTRQSPKNWFGTMD----------------------------------------------------LVDRFEMSNMSNVSRILDMNVTCDREKGTITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRRYQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAGSADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVRLQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNTSALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGTKHLTKHRHRNLIKLINEFKA 370
            ++ LDV  A LNA  + DV+V+ AP     N   G P+V KL++SL G  QS   W  T+D                                                    L DRFEM++M  V RIL ++V  D E+GT+ ISQ+ Y   +++R+GM+  NP  TPG G E+S NQP++++L   +K+ YQ++ G+++YLAQ TR+D+ YA  QL++A S P +V++ AAKH+LRYL G+    I YK+G FRLAAF+D+++G NPDNGRST+ Y+  LA   IS+  + Q LTAQST EAE+ A + + +EAV+ SN + +L F ++FGSVP+  D+T AL  AG+  +S R KH+ALRYFF+++LV+ G+I++H+  ++ QLAD+ TK+L KHR  ++I+ I +F  
Sbjct:  291 IYQLDVVGAFLNALCDRDVYVRPAPGTSAKNSATGEPMVYKLERSLYGLSQSHALWNDTLDESLTVLGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKIYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQFRLAAFTDSSFGANPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNF-KTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRELVLRGQITLHHRPSEHQLADIATKYLPKHRFASIIQQIKDFSC 701          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71904.14869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5U2_9PHAE7.830e-13651.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JME8_9PHAE1.030e-13149.77Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KJH6_9PHAE1.280e-12450.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNH5_9PHAE2.800e-11952.13Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG39_9PHAE2.520e-11848.77Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L6R7_9PHAE2.460e-11653.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JF46_9PHAE4.420e-9842.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE5.790e-9541.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE1.350e-9441.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE1.460e-9441.50Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..71
e-value: 1.5E-12
score: 47.7
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 144..338
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 144..338

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71904contigH-elongata_contig71904:1391..2659 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71904.14869.1mRNA_H-elongata_contig71904.14869.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71904 1391..2659 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71904.14869.1 ID=prot_H-elongata_contig71904.14869.1|Name=mRNA_H-elongata_contig71904.14869.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp
MLAIAVELDCEVHMLDVQTAILNADVEEDVFVKMAPDYETNDKPGVPLVM
KLKKSLCGTRQSPKNWFGTMDLVDRFEMSNMSNVSRILDMNVTCDREKGT
ITISQKDYTEDVVQRYGMKSFNPAYTPGVGPELSPNQPEEKLLNEEEKRR
YQAITGAVMYLAQVTRYDILYAVNQLARAMSKPVKVHIGAAKHLLRYLAG
SADFSITYKQGGFRLAAFSDTNWGNNPDNGRSTSSYIVMLANAPISFKVR
LQGLTAQSTREAELVAAALTIKEAVFCSNMILKLGFDESFGSVPLYIDNT
SALHAAGSRTYSPRAKHIALRYFFVQKLVVGGKISIHYVQNDDQLADLGT
KHLTKHRHRNLIKLINEFKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like