prot_H-elongata_contig71892.14867.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71892.14867.1
Unique Nameprot_H-elongata_contig71892.14867.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length171
Homology
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: D7FVN6_ECTSI (Guanyl nucleotide exchange factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVN6_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 4.360e-82
Identity = 118/165 (71.52%), Postives = 138/165 (83.64%), Query Frame = 0
Query:    1 VTAVREIIEGDGPSQTKRKQGGRVFQAGSTNVLGSFCPEFTPVRGLDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHVQNIKV 165
            +TAVRE  EG+G  + K  +GGRV+QAGSTNVLG+FCP F P  GLDEV V+QVSAGYGHSCCCT +GELYTWG+NRDGCLGLPR+TKF + PQLV+CLY SP NLA+GRP+RQSSV+D L + +AVDGDRSGD  RKCSCTQ DPQGWWEVDL  +VHV  +K+
Sbjct:  284 LTAVREAHEGEGEGRAKALRGGRVYQAGSTNVLGTFCPAFKPTMGLDEVMVKQVSAGYGHSCCCTMDGELYTWGSNRDGCLGLPRSTKFANFPQLVTCLYVSPKNLAMGRPSRQSSVYDGLSAGMAVDGDRSGDHYRKCSCTQQDPQGWWEVDLGQLVHVHQVKI 448          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: A0A6H5JHV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHV0_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 7.110e-48
Identity = 72/98 (73.47%), Postives = 85/98 (86.73%), Query Frame = 0
Query:   67 EGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHVQNIK 164
            +GELYTWG+NRDGCLGLPR+TKF + PQLV+CLY SPTNLA+GRP+RQSSV+D L + +AVDG+RSGD  RKCSCTQ DPQGWWEVDL  +VHV  +K
Sbjct:    2 DGELYTWGSNRDGCLGLPRSTKFANFPQLVTCLYVSPTNLAIGRPSRQSSVYDGLSAAMAVDGERSGDHYRKCSCTQQDPQGWWEVDLGQLVHVHQVK 99          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: A0A8J2SRF7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRF7_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.640e-40
Identity = 78/166 (46.99%), Postives = 100/166 (60.24%), Query Frame = 0
Query:    1 VTAVREIIEGDGPSQTKRKQGGRVFQAGSTNVLGSFCPEFTPVRG-LDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHVQNIKV 165
            VT + E+  G G ++ K KQGG+VF AGS +VLG F P F  V G L  V   Q SAG+ HS   T+EGELY WG N DGC       +F+  P L +C+Y+ P NLALGRP RQSS +    + +AVDG+  G     C+ TQ DPQ WWEVDL    ++  +K+
Sbjct:  849 VTLIEEVWTGTGTNRMKEKQGGQVFAAGSASVLGLFHPAFDRVMGELASVQAVQASAGFAHSGVVTSEGELYCWGMNDDGCCAAHPKVRFLAEPTLAACIYSRPGNLALGRPARQSSCYGGQDAHVAVDGNCDGSSPELCTSTQQDPQAWWEVDLGDFANLHIVKL 1014          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: A0A7S2WVE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVE5_9STRA)

HSP 1 Score: 138 bits (348), Expect = 4.900e-39
Identity = 65/134 (48.51%), Postives = 84/134 (62.69%), Query Frame = 0
Query:   27 AGSTNVLGSFCPEFTPVRGLDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHV 160
            AG T+VLG  CP FTPV GL+   + QVS G+ HS   + EGEL+ WG N+ GC G P    F   P  VSC+YA+P+NLALG    QSSV+D   + +A+DGD  G    +C  TQ +PQ WWE+DL + V +
Sbjct:    1 AGPTSVLGISCPGFTPVPGLEHAAIVQVSGGFSHSAAVSIEGELFCWGLNQTGCCGAPPVQYFCPEPYNVSCIYATPSNLALGGSATQSSVYDGKDAALAIDGDVDGSSPDRCCSTQCEPQPWWELDLGNFVTI 134          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: A0A6G0XXD3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXD3_9STRA)

HSP 1 Score: 118 bits (296), Expect = 9.590e-28
Identity = 60/145 (41.38%), Postives = 85/145 (58.62%), Query Frame = 0
Query:   21 GGRVFQAGSTNVLGSFCPEFTPVRGLDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHVQNIKV 165
            GG V+  GS   L  + P ++ V+ L  + V++V  G+GH+   T  GELYTWG N D C G P   + +  P+L+   + +P NLAL +P RQSSVF+   ++ AVDG++SG     C+ TQ D   WWEVDL     ++ IKV
Sbjct: 1006 GGDVYMCGSAGPLLHYTPTWSIVQKLRGLPVKEVCCGFGHTAAVTYFGELYTWGQNIDECTGHPADRRVIQEPELLRAFHVAPYNLALRKPARQSSVFNEQDADRAVDGNKSGQ-LHTCNHTQFDDHPWWEVDLGQPSVIERIKV 1149          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: A0A2P4XEF6_9STRA (Regulator of chromosome condensation (RCC1) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XEF6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 4.250e-27
Identity = 56/150 (37.33%), Postives = 83/150 (55.33%), Query Frame = 0
Query:   16 TKRKQGGRVFQAGSTNVLGSFCPEFTPVRGLDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHVQNIKV 165
            +K+  GG V+  G    L  +   +  V  LD V +RQV+ G  H+   ++ GELYTWG N  GC G      F+D P+L+ CL+  P NLALGRP RQ ++++  G  +AV+G++ G     C  T  +   WWEVDL     ++ I++
Sbjct:  376 SKKLLGGHVYVCGGATALSRYMLSWERVPELDSVAIRQVACGNSHTAAVSSYGELYTWGRNFHGCTGHDANRIFIDKPELLKCLHVEPYNLALGRPCRQITIYNEQGPHLAVNGEKGGT-LATCIHTHLEDSPWWEVDLGQPAVIEKIRL 524          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: K0S522_THAOC (EF-hand domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S522_THAOC)

HSP 1 Score: 112 bits (280), Expect = 1.330e-25
Identity = 61/151 (40.40%), Postives = 91/151 (60.26%), Query Frame = 0
Query:   21 GGRVFQAGSTNVLGSFCPEFTPVRGLDE--VTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDN---LGSEIAVDGDRSGDGCRKCSC-TQHDPQGWWEVDLESVVHVQNIKV 165
            GGRV+ AG  ++LG  CP F  +   ++   TV  +SAG  H    T  GE+Y WG+NR+GC G PR  +FV+ P  ++ LY +P+NLALG+P+R SS + +   L +  AVDGD  G    K    +Q +   W++VDL+S  H+ +I++
Sbjct:  700 GGRVYVAGPKHILGQTCPTFRQLDVFEKSSTTVECISAGNHHQAVVTNAGEVYCWGDNRNGCCGQPREMRFVETPTKIA-LYEAPSNLALGKPSRLSSRYKDASGLSANNAVDGDIDGHSEDKLLAHSQWEANPWFDVDLQSFAHISHIRL 849          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: A0A0P1AEI3_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEI3_PLAHL)

HSP 1 Score: 108 bits (270), Expect = 3.000e-24
Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = 0
Query:   21 GGRVFQAGSTNVLGSFCPEFTPVRGLDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHVQNIKV 165
            GG+V+  G    L  +   +  +     ++V QV+ G  H+   ++ GELYTWG N  GC G      F++ P+L+ CL+ +P NLALG+P+RQ S+++  G  +AV+G   G     C  TQ +   WWEVDL  +  ++ I++
Sbjct: 1025 GGQVYVCGGATALNRYVLSWEQIPDFTCISVCQVACGGSHTAAVSSYGELYTWGRNSHGCTGHNANRLFIEKPELLKCLHVAPYNLALGKPSRQISIYNEQGPNLAVNGKTEG-ALAVCIHTQMEDNPWWEVDLGQLAVIEKIRL 1168          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: A0A024UHJ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UHJ3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.210e-22
Identity = 60/170 (35.29%), Postives = 85/170 (50.00%), Query Frame = 0
Query:    2 TAVREIIEGDGPSQTKRKQGGRVFQAGSTNVLGSFCPEFTPVRGLDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLYASPTNLALGRPTR------QSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWWEVDLESVVHVQNIKV 165
            TA    IE D     +  +GG ++  GS + LG FCP F  +  L  V +  VS G  H+   +T+GE+YTWGNN  GC G     ++V  P  + C+Y  P N+A  R T+      QSSV     + +A+DG+  G     CS T  +   +W+VDL     V  I+V
Sbjct:  890 TAALTAIEAD---MARGSKGGHLYVCGSAHALGKFCPVFVALPQLKGVPISNVSCGNAHTAAVSTDGEIYTWGNNTGGCTGHTLVHRYVKAPTKLHCMYQMPENMA--RHTKYTVAAVQSSVNSGYSAAMALDGNTDGQFESSCSQTFCEICPFWQVDLGVHCRVDTIRV 1054          
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Match: UPI0005CB1C8C (ultraviolet-B receptor UVR8 isoform X1 n=2 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005CB1C8C)

HSP 1 Score: 64.7 bits (156), Expect = 4.330e-9
Identity = 48/121 (39.67%), Postives = 58/121 (47.93%), Query Frame = 0
Query:   21 GGRVFQAGSTNV--LG-----SFCPEFTPVRGLDEVTVRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGL-PRTTKFVDIPQLVSCLYASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSG 133
            GGRVF  G  +   LG      +  E   V G+D+  V Q+S GY HSC  T +GELY WG N +G LGL  R  K V IP  V CL      +A        +V D  G E    G+ SG
Sbjct:   81 GGRVFATGLNDFGQLGVSSDVPYSTEPAEVSGIDKQVV-QISTGYYHSCAVTEDGELYMWGKNSNGQLGLGKRGAKAVSIPTKVECLAGMTIRMAALGSEHSVAVTD--GGECLSWGEGSG 198          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71892.14867.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVN6_ECTSI4.360e-8271.52Guanyl nucleotide exchange factor n=1 Tax=Ectocarp... [more]
A0A6H5JHV0_9PHAE7.110e-4873.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J2SRF7_9STRA1.640e-4046.99Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A7S2WVE5_9STRA4.900e-3948.51Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A6G0XXD3_9STRA9.590e-2841.38Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A2P4XEF6_9STRA4.250e-2737.33Regulator of chromosome condensation (RCC1) n=1 Ta... [more]
K0S522_THAOC1.330e-2540.40EF-hand domain-containing protein n=1 Tax=Thalassi... [more]
A0A0P1AEI3_PLAHL3.000e-2435.17FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxI... [more]
A0A024UHJ3_9STRA4.210e-2235.29Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
UPI0005CB1C8C4.330e-939.67ultraviolet-B receptor UVR8 isoform X1 n=2 Tax=Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 2..106
e-value: 7.3E-9
score: 37.0
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 21..106
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 107..168
e-value: 1.3E-14
score: 56.4
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 103..166
NoneNo IPR availablePFAMPF13540RCC1_2coord: 51..80
e-value: 2.5E-10
score: 39.9
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 68..119
score: 8.595

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71892contigH-elongata_contig71892:1708..3062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71892.14867.1mRNA_H-elongata_contig71892.14867.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71892 1708..3062 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71892.14867.1 ID=prot_H-elongata_contig71892.14867.1|Name=mRNA_H-elongata_contig71892.14867.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=171bp
VTAVREIIEGDGPSQTKRKQGGRVFQAGSTNVLGSFCPEFTPVRGLDEVT
VRQVSAGYGHSCCCTTEGELYTWGNNRDGCLGLPRTTKFVDIPQLVSCLY
ASPTNLALGRPTRQSSVFDNLGSEIAVDGDRSGDGCRKCSCTQHDPQGWW
EVDLESVVHVQNIKVLVAKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR008979Galactose-bd-like_sf
IPR000408Reg_chr_condens