prot_H-elongata_contig7182.14858.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7182.14858.1
Unique Nameprot_H-elongata_contig7182.14858.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length181
Homology
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BLAST of mRNA_H-elongata_contig7182.14858.1 vs. uniprot
Match: D7FMX5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMX5_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 7.790e-18
Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 0 
Query:    1 MQIRFSGCVTGNLQCGSLGMDPSVVLKGSANVNPREKPDKAKARATSGPARPRQQRVQSRGGISDEASSSSKALGSTSVISPESVPAREAAFDDLKAQKQKS 102
            MQIRF+GCVTGNL C SLGMDPSVVLKGSAN+NPREK +K K+++    A PR ++  SR        +SS+A  STSV+SPESV +R + +D  K +  +S
Sbjct:  148 MQIRFAGCVTGNLICASLGMDPSVVLKGSANINPREKVEKTKSKS----AAPRHKQG-SRSQTRSAEDTSSRA--STSVLSPESVGSRGSTYDKQKRRASES 242
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7182.14858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMX5_ECTSI7.790e-1854.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7182contigH-elongata_contig7182:3648..4815 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7182.14858.1mRNA_H-elongata_contig7182.14858.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7182 1696..5380 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7182.14858.1 ID=prot_H-elongata_contig7182.14858.1|Name=mRNA_H-elongata_contig7182.14858.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=181bp
MQIRFSGCVTGNLQCGSLGMDPSVVLKGSANVNPREKPDKAKARATSGPA
RPRQQRVQSRGGISDEASSSSKALGSTSVISPESVPAREAAFDDLKAQKQ
KSKVRTGGETVENVKVHGRGSSSSSSEATASPSSMANGDEPSKAILSKDN
GPVEMPKIGDTVNIVRGRPPLSAGNKQGGS*
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