prot_H-elongata_contig71804.14854.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71804.14854.1
Unique Nameprot_H-elongata_contig71804.14854.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
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BLAST of mRNA_H-elongata_contig71804.14854.1 vs. uniprot
Match: D7FZY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZY6_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.010e-63
Identity = 99/163 (60.74%), Postives = 116/163 (71.17%), Query Frame = 0 
Query:    1 MWWAMSKSAPFVHQVCLLPENTHPSQFFGMEILHPPPVVSDMPLLHRCYKLLKEESRPGLIRVYKFKLEPGESTGPHSWDFCGIVLCLSNGGGRIDAIGGNSHAGGNCSPFGDGENVMSRVGGWKWVEGPVEIDVRNAGERPYEAVVVEWLGENGEVGGPSKL 163
            +WWAMSKSAP+VHQVCLLPENTH S FF MEIL PPP  S   L HRCY L  E+SRPGL RVY F+L+PGESTGPH+  F G+VLCLS+GGG ++A GG          F  GE  +S+VGGWKW++GPV  + RNAG   Y+A VVEWLG    V G S+L
Sbjct:   84 LWWAMSKSAPYVHQVCLLPENTHNSHFFAMEILRPPPTCSSRALDHRCYSLRGEDSRPGLARVYDFRLKPGESTGPHTLGFSGVVLCLSDGGGSLEADGG---------VFAGGE--LSKVGGWKWIDGPVSANARNAGGSVYQAFVVEWLGGGHSVEGVSRL 235
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BLAST of mRNA_H-elongata_contig71804.14854.1 vs. uniprot
Match: A0A836C8W9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W9_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.640e-29
Identity = 63/150 (42.00%), Postives = 85/150 (56.67%), Query Frame = 0 
Query:    2 WWAMSKSAPFVHQVCLLPENTHPSQFFGMEILHPPPVVSDMPLLHRCYKLLKEESRPGLIRVYKFKLEPGESTGPHSWDFCGIVLCLSNGGGRIDAIGGNSHAGGNCSPFGDGENVMSRVGGWKWVEGPVEIDVRNAGERPYEAVVVEWL 151
            WW++ K+   VHQVCL      P++FFG+E+L  PPV S+ PL    Y LL ++      R+Y   L+PG+STG H+W+F   VLCLS+G   +   G +S       PF      +   G +KWVEGPV   V+N G   Y AVVVEW+
Sbjct:   84 WWSLYKAKDMVHQVCLPGTCAAPAKFFGVEVLKSPPVYSESPLGGNAYTLL-DQFTIDRARIYDMTLQPGQSTGMHTWNFFATVLCLSDG--ELSTEGADS-------PF--AFLGLRTYGQYKWVEGPVTFSVKNEGSAAYTAVVVEWV 221
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71804.14854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZY6_ECTSI1.010e-6360.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836C8W9_9STRA3.640e-2942.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 58..151
e-value: 5.0E-7
score: 31.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71804contigH-elongata_contig71804:992..1483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71804.14854.1mRNA_H-elongata_contig71804.14854.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71804 419..1954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71804.14854.1 ID=prot_H-elongata_contig71804.14854.1|Name=mRNA_H-elongata_contig71804.14854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
MWWAMSKSAPFVHQVCLLPENTHPSQFFGMEILHPPPVVSDMPLLHRCYK
LLKEESRPGLIRVYKFKLEPGESTGPHSWDFCGIVLCLSNGGGRIDAIGG
NSHAGGNCSPFGDGENVMSRVGGWKWVEGPVEIDVRNAGERPYEAVVVEW
LGENGEVGGPSKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll