prot_H-elongata_contig71790.14850.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71790.14850.1
Unique Nameprot_H-elongata_contig71790.14850.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length95
Homology
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A4S4LZR7_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4LZR7_9APHY)

HSP 1 Score: 77.4 bits (189), Expect = 1.520e-14
Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            LSK D P + +EKE+MR+ PY+ AVG+L     MTR DIA AV  VA+F  NPGPAH +AV  IM+YL  T+D
Sbjct:  597 LSKDDCPTSNDEKERMRRIPYQNAVGSLNHAAVMTRPDIAYAVHRVAQFSINPGPAHWEAVKHIMRYLKATRD 669          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A2N9H4X0_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H4X0_FAGSY)

HSP 1 Score: 75.5 bits (184), Expect = 7.280e-14
Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 0
Query:    4 TFDVKKGNKIPATLGVPILSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            TF++K   +    LG  +LS    P+N EEK +M K PY  A+G+LM     TR DI  AV  V+R+  NPGPAH +AV +I++YL  T D
Sbjct:  809 TFEMKDMGEANFVLGDALLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVSMVSRYQSNPGPAHWRAVKRILRYLRGTSD 899          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6A4CX45_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6A4CX45_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.030e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  VG+LM     TR DI+ AV  ++RF ENPG  H  A +K+++YLL TKD
Sbjct:   80 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKD 152          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6G0JFW9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JFW9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.650e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  VG+LM     TR DI+ AV  ++RF ENPG  H  A +K+++YLL TKD
Sbjct:   39 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKD 111          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6A4BH04_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4BH04_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.320e-13
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  VG+LM     TR DI+ AV  + RF ENPG  H  A +K+++YLL TKD
Sbjct:   39 LTKADEPQTEEDKAKMKSTPYRSLVGSLMYLACGTRPDISVAVAKLNRFLENPGEKHWDAGIKVVRYLLKTKD 111          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6A3PU23_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3PU23_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.570e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  VG+LM     TR DI+ AV  ++RF ENPG  H  A +K+++YLL TKD
Sbjct:   39 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKD 111          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6A3X296_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3X296_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.950e-13
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  +G+L+     TR DI+ AV  ++RF ENPG  H  A MK+++YLL TKD
Sbjct:   39 LTKADEPQTEEDKSKMKLKPYRTLMGSLVYLACGTRPDISVAVAKISRFLENPGEKHWDAGMKVVRYLLKTKD 111          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6G0Q496_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0Q496_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 3.680e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  VG+LM     TR DI+ AV  ++RF ENPG  H  A +K+++YLL TKD
Sbjct:   39 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKD 111          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6A3G781_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3G781_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.080e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  VG+LM     TR DI+ AV  ++RF ENPG  H  A +K+++YLL TKD
Sbjct:  136 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKD 208          
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Match: A0A6A4DAE2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DAE2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.200e-13
Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 0
Query:   22 LSKADKPRNPEEKEKMRKFPYREAVGALMRTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD 94
            L+KAD+P+  E+K KM+  PYR  VG+LM     TR DI+ AV  ++RF ENPG  H  A +K+++YLL TKD
Sbjct:  110 LTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKD 182          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71790.14850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4LZR7_9APHY1.520e-1456.16Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9H4X0_FAGSY7.280e-1445.05Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A6A4CX45_9STRA1.030e-1350.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0JFW9_9STRA1.650e-1350.68Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6A4BH04_9STRA2.320e-1350.68Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3PU23_9STRA2.570e-1350.68Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6A3X296_9STRA2.950e-1349.32Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6G0Q496_9STRA3.680e-1350.68Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3G781_9STRA4.080e-1350.68Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A4DAE2_9STRA5.200e-1350.68Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71790contigH-elongata_contig71790:2830..3114 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71790.14850.1mRNA_H-elongata_contig71790.14850.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71790 2533..3114 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71790.14850.1 ID=prot_H-elongata_contig71790.14850.1|Name=mRNA_H-elongata_contig71790.14850.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
MIETFDVKKGNKIPATLGVPILSKADKPRNPEEKEKMRKFPYREAVGALM
RTTTMTRSDIASAVRAVARFCENPGPAHKKAVMKIMQYLLHTKD*
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