prot_H-elongata_contig71716.14847.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71716.14847.1
Unique Nameprot_H-elongata_contig71716.14847.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length74
Homology
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5K6X8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6X8_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 8.090e-13
Identity = 35/71 (49.30%), Postives = 51/71 (71.83%), Query Frame = 0
Query:    3 GGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPIDV-AIKVHEDNEGAIKMARNRFSS 72
            GGA+SWFSR QK    +++E+EYVAL ++V  + FLRQ+  FM P + +  I V EDN+GAI++A+N  S+
Sbjct:  184 GGAVSWFSRTQKYVTLSTTETEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISN 254          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5KBS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS9_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.040e-10
Identity = 32/71 (45.07%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    3 GGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPIDV-AIKVHEDNEGAIKMARNRFSS 72
            GG ++WFSR QK    +++E+EYVA+A+++ G+ FLRQ   FM P   +  I V EDN+GAI++A+N  ++
Sbjct:  138 GGCVTWFSRTQKCVTLSTTEAEYVAIADVLKGVLFLRQGWRFMLPDAGMPCIPVFEDNQGAIQIAQNPITN 208          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5K7Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Y0_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.060e-10
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    2 AGGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPP-IDVAIKVHEDNEGAIKMARNRFSS 72
            AGGAI+WFS+ QK    ++++++YVA+A+M   +  LRQV  FM P  +   I +HEDNEGAI++A++  S+
Sbjct: 1656 AGGAIAWFSKTQKCVTLSTTQADYVAMADMGKEILLLRQVWRFMLPKELRPCIPLHEDNEGAIQVAKHPISN 1727          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5JWA6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA6_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 1.440e-10
Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 0
Query:    2 AGGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPP-IDVAIKVHEDNEGAIKMARNRFS 71
            AGGAI+WFS+ Q     ++++SEYVA+A+M   + FLRQV  FM P  +   I ++EDNEGAI++A++  S
Sbjct:  627 AGGAIAWFSKTQTCVTLSTTQSEYVAMADMGKEILFLRQVWRFMLPKELRPCIPLYEDNEGAIQIAKHPIS 697          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5K8K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K2_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.490e-10
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    3 GGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPIDV-AIKVHEDNEGAIKMARNRFSS 72
            GG ++WFSR QK    +++E+EYVA+A+++  + FLRQV  FM P   +  I V EDN+GAI++A N  ++
Sbjct:  166 GGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQVAHNPITN 236          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.540e-10
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    3 GGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPIDV-AIKVHEDNEGAIKMARNRFSS 72
            GG ++WFSR QK    +++E+EYVA+A+++  + FLRQV  FM P   +  I V EDN+GAI++A N  ++
Sbjct:  194 GGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITN 264          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5K684_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K684_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.550e-10
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    3 GGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPIDV-AIKVHEDNEGAIKMARNRFSS 72
            GG ++WFSR QK    +++E+EYVA+A+++  + FLRQV  FM P   +  I V EDN+GAI++A N  ++
Sbjct:  184 GGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITN 254          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5K7P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P1_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 1.860e-10
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    3 GGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPIDV-AIKVHEDNEGAIKMARNRFSS 72
            GG ++WFSR+QK    +++ESEYVA+A++   + FLRQV  FM P   +  I V EDN+GAIK+  N  ++
Sbjct:  207 GGCVTWFSRMQKCFSLSTTESEYVAIADVSKEVLFLRQVCRFMLPDASMPCIPVFEDNQGAIKIGHNPITN 277          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.880e-10
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 0
Query:    3 GGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPIDV-AIKVHEDNEGAIKMARNRFSS 72
            GG ++WFSR QK    +++E+EYVA+A+++  + FLRQV  FM P   +  I V EDN+GAI++A N  ++
Sbjct:  311 GGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITN 381          
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Match: A0A6H5L5J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5J6_9PHAE)

HSP 1 Score: 64.7 bits (156), Expect = 1.920e-10
Identity = 33/72 (45.83%), Postives = 51/72 (70.83%), Query Frame = 0
Query:    2 AGGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPP-IDVAIKVHEDNEGAIKMARNRFSS 72
            AGGAI+WFS+ Q+    +++++EYVA+A+M   + FLRQV  FM P  +     +HEDNEGAI++A++  S+
Sbjct:  441 AGGAIAWFSKTQECVTLSTTQAEYVAMADMGKVILFLRQVWRFMLPKELRPCSPLHEDNEGAIQIAKHPISN 512          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71716.14847.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6X8_9PHAE8.090e-1349.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBS9_9PHAE1.040e-1045.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7Y0_9PHAE1.060e-1045.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JWA6_9PHAE1.440e-1047.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K8K2_9PHAE1.490e-1045.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE1.540e-1045.07Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K684_9PHAE1.550e-1045.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K7P1_9PHAE1.860e-1046.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE1.880e-1045.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5J6_9PHAE1.920e-1045.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71716contigH-elongata_contig71716:2681..2902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71716.14847.1mRNA_H-elongata_contig71716.14847.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71716 2657..3037 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71716.14847.1 ID=prot_H-elongata_contig71716.14847.1|Name=mRNA_H-elongata_contig71716.14847.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=74bp
MAGGAISWFSRVQKVTVAASSESEYVALAEMVNGLRFLRQVNEFMTPPID
VAIKVHEDNEGAIKMARNRFSSR*
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