prot_H-elongata_contig71669.14840.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71669.14840.1
Unique Nameprot_H-elongata_contig71669.14840.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length286
Homology
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: D7FPZ1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPZ1_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 4.370e-108
Identity = 190/309 (61.49%), Postives = 208/309 (67.31%), Query Frame = 0
Query:    1 QASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPV-----------------------TKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMERMESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ 286
            Q+SADDFFLQCNGK FNSFEE+TCRVVFV+  TFDL       P+ + P H  PA          GS   A     XXXXX       + ++ +PP   + +   FSP+                                  VA AAG           E+ ASTCVICMERMESRVLTTVCNHSFHVECL+KWQDSPCPVCRFHHNNASEASTCQECQA DNLWVCLICGSVLCGSRHEDH+ GHY STLHAYAIEIETQQVWDFAGDGFVHRLI NKADGKLVEISDP QTS+ERPQ+PARLSD+Q
Sbjct:  150 QSSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDL-------PADSSPPHTPPA----------GSAVGATAXXXXXXXXXXGSGGISSSAGTPPQ--LRTARHFSPIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGW----------EYDASTCVICMERMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQAADNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 429          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A6H5K0J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0J5_9PHAE)

HSP 1 Score: 317 bits (813), Expect = 1.010e-101
Identity = 181/294 (61.56%), Postives = 192/294 (65.31%), Query Frame = 0
Query:    2 ASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPVTKPAHGNGAAV---------VAGAAGTSMPTLSPEASEHGASTCVICMERMESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ 286
            +SADDFFLQCNGK FNSFEE+TCRVVFV+  TFDL       P+ + P H  PA                     XXXXX                                                VA AAG           E+ ASTCVICME MESRVLTTVCNHSFHVECL+KWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDH+ GHY STLHAYAIEIETQQVWDFAGDGFVHRLI NKADGKLVEISDP QTS+ERPQ+PARLSD+Q
Sbjct:    8 SSADDFFLQCNGKRFNSFEETTCRVVFVAKATFDL-------PADSSPPHTPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAQAAGW----------EYDASTCVICMEHMESRVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIHNKADGKLVEISDPEQTSEERPQMPARLSDVQ 284          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A835YPP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP8_9STRA)

HSP 1 Score: 209 bits (532), Expect = 3.370e-59
Identity = 100/170 (58.82%), Postives = 123/170 (72.35%), Query Frame = 0
Query:  118 AAVVAGAAGTSMPTLSPEASEHGASTCVICMERMESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHED-HVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ 286
            AA  AG A TS   L    +E     CVIC E++E   LTT C H+FH+EC+  WQDSPCPVCRFHHN + + STCQEC  + N+ VCLICG V CG R +  H+  H+ +TLHAYA+++ETQQVWDFAG GFVHRLI NKADGK+VE ++PG  S ERPQ P++LSD+Q
Sbjct:  333 AAAAAGPADTSQ-ALHSGGAEAREDACVICFEKLEGGTLTTACKHTFHIECIALWQDSPCPVCRFHHNGSGDDSTCQECGRSVNVHVCLICGYVGCGGREQGGHMSQHHLATLHAYALDVETQQVWDFAGGGFVHRLIYNKADGKMVEANNPGHASGERPQAPSQLSDVQ 501          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: H3GNL2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GNL2_PHYRM)

HSP 1 Score: 180 bits (456), Expect = 3.390e-49
Identity = 108/286 (37.76%), Postives = 142/286 (49.65%), Query Frame = 0
Query:    1 QASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPVTKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLS 283
            Q  AD FFL  NGK+FNS E+  C++VFV +  FD        P   G      AL        +     A  AAT                 SP S    S+ +   +  P                     P        TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C  T++LW+CLICG V CG    +H   HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE  +P   S ER Q P   S
Sbjct:  126 QERADQFFLDHNGKYFNSIEQERCKIVFVRSIEFD--------PVLGGDHPDCDAL-----EEKQTDEETAVAAATPL---------------SPRSERRASSAQMRKLFPP---------------------PPVGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPNPSNMSGERSQNPPTTS 360          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A1Z5K2I6_FISSO (BRCA1-associated protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2I6_FISSO)

HSP 1 Score: 174 bits (441), Expect = 9.670e-48
Identity = 86/167 (51.50%), Postives = 104/167 (62.28%), Query Frame = 0
Query:  144 CVICMERMESR--VLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEA-STCQECQATDNLWVCLICGSVLCGS--------------------RHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTS-KERPQVPARLSDIQ 286
            C +C+E M+    + TTVCNHSFH++CL++WQDSPCPVCR+ H    EA S C +C  TD+ +VCLICG V CG                     R   H   HY  TLHAYA++  TQ VWDFAG G+VHRL++NK DGKLVEISDP  TS +ER   P  LSD Q
Sbjct:  142 CAVCLEHMDETTDIFTTVCNHSFHIDCLIQWQDSPCPVCRYDHAGLKEALSQCHQCGTTDHNYVCLICGIVACGGIPSNDTSASACHLPTQEPTPRATSHAQQHYDETLHAYALDTITQHVWDFAGQGYVHRLLQNKEDGKLVEISDPNNTSSQERSSHPTALSDAQ 308          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A662YFP2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFP2_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.190e-47
Identity = 75/144 (52.08%), Postives = 98/144 (68.06%), Query Frame = 0
Query:  143 TCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLS 283
            TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +   A  C+ C  T++LW+CLICG V CG    +H   HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P   S ER Q P   S
Sbjct:  231 TCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIGSA--CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSDERSQTPPTTS 372          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A8K1CCW0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCW0_PYTOL)

HSP 1 Score: 175 bits (443), Expect = 2.200e-47
Identity = 75/140 (53.57%), Postives = 101/140 (72.14%), Query Frame = 0
Query:  143 TCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVP 279
            TC +C++R++   S +LTT+CNH+FH +CL +W+ S CPVCR+ H +   A  C+ CQ T++LW+CLICG V CG    +H   HY  T+H Y++E+ETQ+VWD+AGDGFVHRLI NK DGK VE  +P  TS ER Q+P
Sbjct:  211 TCAVCLDRLDASASGILTTLCNHTFHCDCLFRWEGSSCPVCRYSHGDIGSA--CEVCQTTEHLWICLICGHVGCGRYSGEHAKQHYQETMHTYSLELETQRVWDYAGDGFVHRLILNKQDGKFVEFPNPDATSGERSQLP 348          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A7S1CIL5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIL5_9STRA)

HSP 1 Score: 170 bits (431), Expect = 4.470e-47
Identity = 74/138 (53.62%), Postives = 95/138 (68.84%), Query Frame = 0
Query:  144 CVICMERMESR---VLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQV 278
            C +C+ER++S    VLTT+CNHSFH  CL +W+DS CPVCRF   + +  + C  C  T+ LW+CL+CG V CG    +H   H+ +T H YA+E+ETQ+VWD+AGDG+VHRLI NK DGKLVE  DP     ER QV
Sbjct:   47 CPVCLERLDSSATGVLTTLCNHSFHCSCLRRWEDSSCPVCRFAQESEAPPTACSVCGETEKLWMCLVCGHVGCGRYSNEHAKAHFEATAHTYAMELETQRVWDYAGDGYVHRLITNKRDGKLVEFPDPHTAGGERTQV 184          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: W2PVR5_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2PVR5_PHYPN)

HSP 1 Score: 170 bits (430), Expect = 9.590e-47
Identity = 74/144 (51.39%), Postives = 98/144 (68.06%), Query Frame = 0
Query:  143 TCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQTSKERPQVPARLS 283
            TC +C++R++   S +LTT+CNHSFH +CL +W+ S CPVCR+ H +    S+C+ C   ++LW+CLICG V CG    +H   HY  TLH Y++E+ETQ+VWD+AGDG+VHRLI NK DGK VE   P   S ER Q P   S
Sbjct:  218 TCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDIG--SSCEVCGTAEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNKQDGKFVEFPSPNNLSGERSQTPPTTS 359          
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Match: A0A507E5E2_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E5E2_9FUNG)

HSP 1 Score: 176 bits (447), Expect = 1.270e-46
Identity = 110/284 (38.73%), Postives = 155/284 (54.58%), Query Frame = 0
Query:    2 ASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLN--PPAAAVPSTNGPAHGVPALVTVIPSSFEGSTNAAAGAATXXXXXTMEDSDSTLNSDSPPSTLVHSTLRFSPVTKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMERME---SRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEAST---------CQECQATDNLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFVHRLIRNKADGKLVEISDPGQT 271
            +SA +F+ + NG+ ++S E   C VV++ +  F  +  PP A  P  + P+         +PS    ++       TXXXX  +  SD+   S + P+     T   SPV  P          GA  T+     P        TC +C++RM+   S +LT VC+H+FH  CL KW DS CPVCR+    +S A+          C EC +TDNLW+CLICG++ CG   E H   H+G T H YA+E+ETQ+VWD+AGDG+VHRLI+N+ DGKLVE+  P +T
Sbjct:  321 SSAQEFYKEYNGREYSSLEPEMCHVVYIKSVEFKSHAIPPYAFPPLPDDPSS------LFLPSRLVTTST------TXXXXTAISYSDT--RSSTAPADDATETRLTSPVKSPT---------GAVTTTQLLELP--------TCPVCLDRMDASASGLLTIVCHHTFHCHCLSKWGDSSCPVCRYSSKFSSSATDPDDDDMLNECMECGSTDNLWICLICGNIGCGRYQEGHAQSHFGETQHLYAMELETQRVWDYAGDGYVHRLIQNRTDGKLVELPAPSRT 573          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71669.14840.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPZ1_ECTSI4.370e-10861.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0J5_9PHAE1.010e-10161.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YPP8_9STRA3.370e-5958.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
H3GNL2_PHYRM3.390e-4937.76Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1Z5K2I6_FISSO9.670e-4851.50BRCA1-associated protein n=2 Tax=Fistulifera solar... [more]
A0A662YFP2_9STRA1.190e-4752.08Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A8K1CCW0_PYTOL2.200e-4753.57Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1CIL5_9STRA4.470e-4753.62Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
W2PVR5_PHYPN9.590e-4751.39Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A507E5E2_9FUNG1.270e-4638.73Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001607Zinc finger, UBP-typeSMARTSM00290Zf_UBP_1coord: 192..241
e-value: 3.2E-17
score: 73.2
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 193..252
e-value: 2.2E-17
score: 63.1
IPR001607Zinc finger, UBP-typePROSITEPS50271ZF_UBPcoord: 191..252
score: 16.414
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 144..180
e-value: 3.4E-7
score: 39.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 143..181
e-value: 3.6E-8
score: 33.6
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 144..181
score: 12.696
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 139..178
e-value: 4.5E-9
score: 37.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 179..267
e-value: 5.0E-22
score: 79.7
IPR011422BRCA1-associated 2PFAMPF07576BRAP2coord: 1..33
e-value: 8.8E-7
score: 29.1
NoneNo IPR availablePANTHERPTHR24007BRCA1-ASSOCIATED PROTEINcoord: 1..270
NoneNo IPR availablePRODOMPD017029coord: 1..29
e-value: 6.0E-4
score: 103.0
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 157..263
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 134..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71669contigH-elongata_contig71669:205..1752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71669.14840.1mRNA_H-elongata_contig71669.14840.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71669 205..1752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71669.14840.1 ID=prot_H-elongata_contig71669.14840.1|Name=mRNA_H-elongata_contig71669.14840.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=286bp
QASADDFFLQCNGKHFNSFEESTCRVVFVSTTTFDLNPPAAAVPSTNGPA
HGVPALVTVIPSSFEGSTNAAAGAATAATAATMEDSDSTLNSDSPPSTLV
HSTLRFSPVTKPAHGNGAAVVAGAAGTSMPTLSPEASEHGASTCVICMER
MESRVLTTVCNHSFHVECLVKWQDSPCPVCRFHHNNASEASTCQECQATD
NLWVCLICGSVLCGSRHEDHVLGHYGSTLHAYAIEIETQQVWDFAGDGFV
HRLIRNKADGKLVEISDPGQTSKERPQVPARLSDIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR011422BRAP2