prot_H-elongata_contig71654.14837.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71654.14837.1
Unique Nameprot_H-elongata_contig71654.14837.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length377
Homology
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BLAST of mRNA_H-elongata_contig71654.14837.1 vs. uniprot
Match: A0A6H5KM79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM79_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 7.050e-84
Identity = 171/399 (42.86%), Postives = 227/399 (56.89%), Query Frame = 0 
Query:    2 GCESPGPGSYYPVHVMRNFSPPEHWSQV---DKAGRAPR-KQINTKPTWSKPSLPVRPPYIARAGATSKEVKRAWRVKKRAVLSPTISPRCMWVTGVSTPNGLQAWGDISCEIGPINNGCE-LVRSPRSRAPSPRRG-GSVRRGPVHTGETRATSPDFREVRFLGHDLTKQGSGTAKDTPGPGAYNVRPIMSSGTTFAGAR--PKCSRITTVLTAIACAECQVTGKVLS--TTAVAERCW-------PHPPLRCSNRLQPPRRGADSPGPAYGLPSDFDLKRPNKQCFFPPRLVSKSRFS-----GAGRRGHIA------APVSMTDVSALSRARRDMQRYLAKGENGKRGSDDT----LGVPVKTSIGQGILLQVRPNSVSLVQFPWGIFFTAEVLAH 368
            G +SPGP  YYP H   +F PP+HW++V   DK GR P  +  N K TW + ++P RPP   +A     + +RAW  K+R    P+ +PRCMW+ GV+T  GLQAWGD++   GPI+ G +    SP  R P+PRRG  S RRGP+H+ E RATSP FRE R+L  DLT++G+  A DTPGPG Y++RP +  GT+FAG R   KCS+  TV   +A A+    G+  S   T+ A+            P    S RL  P +G +SPGPAY LPSDFD K  NK+ F PPR    S F      G GR  ++A        V       L +ARR+     + G   K G  D     LGVPV T +G+GILL++R + ++ V+ PWG+ +T EVL H
Sbjct:  169 GAQSPGPAVYYP-HEAWDFGPPKHWNRVNKSDKPGRMPSSRSFNAKVTWGEATMP-RPPNPVKAAQIPTKEERAWLSKRRGTARPSTAPRCMWLNGVNTRGGLQAWGDVATNTGPIHVGNKGNCASPWDR-PTPRRGPDSQRRGPIHSREVRATSPGFRETRYLNRDLTRKGACKATDTPGPGQYSIRPPLERGTSFAGPRRPTKCSKAATVNAMVASAK----GRAASYEKTSGAKNGMVRGGDRQSRPSTAPSQRLSIPLKGRESPGPAYALPSDFDQKFVNKKTFHPPRCTGTSPFGTEEPRGTGRSANLAPRADEDGHVRAKQTKRLPKARRE----ASSGPVAKSGRVDAIGRALGVPVNTCMGRGILLRIRADGMTFVRLPWGVLYTTEVLTH 556
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71654.14837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KM79_9PHAE7.050e-8442.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71654contigH-elongata_contig71654:563..1995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71654.14837.1mRNA_H-elongata_contig71654.14837.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71654 79..2389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71654.14837.1 ID=prot_H-elongata_contig71654.14837.1|Name=mRNA_H-elongata_contig71654.14837.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=377bp
MGCESPGPGSYYPVHVMRNFSPPEHWSQVDKAGRAPRKQINTKPTWSKPS
LPVRPPYIARAGATSKEVKRAWRVKKRAVLSPTISPRCMWVTGVSTPNGL
QAWGDISCEIGPINNGCELVRSPRSRAPSPRRGGSVRRGPVHTGETRATS
PDFREVRFLGHDLTKQGSGTAKDTPGPGAYNVRPIMSSGTTFAGARPKCS
RITTVLTAIACAECQVTGKVLSTTAVAERCWPHPPLRCSNRLQPPRRGAD
SPGPAYGLPSDFDLKRPNKQCFFPPRLVSKSRFSGAGRRGHIAAPVSMTD
VSALSRARRDMQRYLAKGENGKRGSDDTLGVPVKTSIGQGILLQVRPNSV
SLVQFPWGIFFTAEVLAHCSKSTIDP*
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