prot_H-elongata_contig71557.14824.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71557.14824.1
Unique Nameprot_H-elongata_contig71557.14824.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5J7V6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7V6_9PHAE)

HSP 1 Score: 63.2 bits (152), Expect = 3.240e-10
Identity = 29/51 (56.86%), Postives = 41/51 (80.39%), Query Frame = 0
Query:  110 LDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNIT 160
            LDGH S+++ +V+K A+  NI +LFQLPSH+S++TQPLDV AFG  K+ +T
Sbjct:    2 LDGHASHMSYEVIKLAMELNI-ILFQLPSHTSHITQPLDVVAFGTFKKEVT 51          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5K7A1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A1_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 5.160e-10
Identity = 32/59 (54.24%), Postives = 43/59 (72.88%), Query Frame = 0
Query:  106 VTHYLDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTALT 164
            V+  LDGH S+ T D +  A++ +IDL FQLPSH+S++TQPLDV  FGI K+ +T  LT
Sbjct:  115 VSLVLDGHASHTTFDAISLAISLDIDL-FQLPSHTSHITQPLDVGTFGIFKKELTRVLT 172          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 2.540e-9
Identity = 32/57 (56.14%), Postives = 43/57 (75.44%), Query Frame = 0
Query:  107 THYLDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTAL 163
            T  LDGH S+V+ +V+K A+  NI +LFQLPSH+S++TQPLDV AFG  K+ +T  L
Sbjct:  273 TLVLDGHASHVSYEVIKLAMELNI-ILFQLPSHTSHITQPLDVVAFGTFKKEVTKVL 328          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5JE68_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE68_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.620e-9
Identity = 31/54 (57.41%), Postives = 42/54 (77.78%), Query Frame = 0
Query:  110 LDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTAL 163
            LDGH S+V+ +V+K A+  NI +LFQLPSH+S++TQPLDV AFG  K+ +T  L
Sbjct:  277 LDGHASHVSYEVIKLAMEVNI-ILFQLPSHTSHITQPLDVVAFGTFKKEVTKVL 329          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 3.830e-9
Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 0
Query:  110 LDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTAL 163
            LDGH S+V+++V++ A+  NI +LFQLPSH+S++TQPLDV AFG  KR +T  L
Sbjct:  280 LDGHASHVSVEVIQLAMELNI-VLFQLPSHTSHITQPLDVVAFGAFKREVTKVL 332          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 4.030e-9
Identity = 31/54 (57.41%), Postives = 43/54 (79.63%), Query Frame = 0
Query:  110 LDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTAL 163
            LDGH S+V+++V++ A+  NI +LFQLPSH+S++TQPLDV AFG  KR +T  L
Sbjct:  521 LDGHASHVSVEVIQLAMELNI-VLFQLPSHTSHITQPLDVVAFGAFKREVTKVL 573          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5JRL2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL2_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 5.950e-9
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 0
Query:   50 QIYRGSLSLPLNSKSGG--DLVRHHLFCRQICFFMSVATILSSLGHRCKKTFAKWAMMVTHYLDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTAL 163
            Q + G     LN   G   D       C ++ F   +      LG R      K  ++V   LDGHTS+V+LDV+K  ++ NI L+ QLPSH S++TQPLDV  FG  K+ + T +
Sbjct:   84 QRFNGDWVADLNGPPGAFNDCTESSFMCGEV-FIKYIKNFHKQLGDR-NLLDGKPHVLV---LDGHTSHVSLDVIKLVISLNIHLV-QLPSHMSHITQPLDVAGFGCFKKELATVI 193          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5JUK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK8_9PHAE)

HSP 1 Score: 64.3 bits (155), Expect = 6.850e-9
Identity = 32/55 (58.18%), Postives = 40/55 (72.73%), Query Frame = 0
Query:  110 LDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTALT 164
            LDGH S+ T D +  AL+ +ID  FQLPSH+S++TQPLDV  FGI K+ IT  LT
Sbjct:  319 LDGHASHTTFDAISLALSLDIDA-FQLPSHTSHITQPLDVGTFGIFKKEITKVLT 372          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5L7K7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K7_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 7.820e-9
Identity = 31/54 (57.41%), Postives = 39/54 (72.22%), Query Frame = 0
Query:  110 LDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNITTAL 163
            LDGH S+ T D + FA+  +IDL FQLPSH+S++TQPLDV  FG  KR +T  L
Sbjct:  245 LDGHASHTTFDAISFAIPLDIDL-FQLPSHTSHITQPLDVGTFGAFKRELTRVL 297          
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Match: A0A6H5KMD7_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMD7_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 9.090e-9
Identity = 29/50 (58.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:  110 LDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVYAFGIVKRNI 159
            LDGHTS+V+LDV+K A++ NI L+ QL SH S++TQPLDV  FG  K+ +
Sbjct:   32 LDGHTSHVSLDVIKLAISLNIHLV-QLASHMSHITQPLDVAGFGCFKKEL 80          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71557.14824.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J7V6_9PHAE3.240e-1056.86DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K7A1_9PHAE5.160e-1054.24DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JBS6_9PHAE2.540e-956.14DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JE68_9PHAE3.620e-957.41DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JV04_9PHAE3.830e-957.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE4.030e-957.41Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL2_9PHAE5.950e-937.07DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK8_9PHAE6.850e-958.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7K7_9PHAE7.820e-957.41DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KMD7_9PHAE9.090e-958.00DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71557contigH-elongata_contig71557:1289..1807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71557.14824.1mRNA_H-elongata_contig71557.14824.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71557 1254..2172 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71557.14824.1 ID=prot_H-elongata_contig71557.14824.1|Name=mRNA_H-elongata_contig71557.14824.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
MLATVLTSPTVAMYFNLKLHHSAPGYRRRKAGDGDKTVRRVTRLSGMLLQ
IYRGSLSLPLNSKSGGDLVRHHLFCRQICFFMSVATILSSLGHRCKKTFA
KWAMMVTHYLDGHTSNVTLDVLKFALANNIDLLFQLPSHSSYVTQPLDVY
AFGIVKRNITTALTTRSRLTAI*
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