prot_H-elongata_contig71533.14822.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71533.14822.1
Unique Nameprot_H-elongata_contig71533.14822.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length544
Homology
BLAST of mRNA_H-elongata_contig71533.14822.1 vs. uniprot
Match: D7FTS5_ECTSI (Glycos_transf_1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS5_ECTSI)

HSP 1 Score: 446 bits (1148), Expect = 8.570e-145
Identity = 292/576 (50.69%), Postives = 364/576 (63.19%), Query Frame = 0
Query:    2 AAMAVDIVYGLHPDNTTGGCVVQRSFEDSLRAA-GVASIRVHVASTPSSAERVFQCLVEK-EKEEKGCGRTVSRLLIFDGIALLFMRNMLCAL---KENPTLLLVGFVHYPFSEPFYRKEPWLRAALPERMLVGPNAGAQLRKEETRMFGLLDKVVAVGASCRSLLTAKHRVSESAIILLEPTFPMPPPLSMSASLSMTLKEFSSESASGGV---ALLGTVRGGRGGGFVSVGTLCRRKGQLELVTAFVAACSAHPRELSGSTLTLIGGADSDHAYAAKV---VYTAAASDTA------------EVRVLGSLPHDQTLEILVGSDAFLLNSSLESWAVAPVEAALRGVPVVTTRVGVLEESLPPGSTMWVGRQQDAGDGDQD---------EDKALASVADWEQALLCFARDRKRLQVEAWRAVWGLRQRFGRE-AESSRMRAVKALLLDHSLHLVKTPDAPIDDSAANGSSVLQDLTVTKNKKKDEEELERERIRRAMIVHAVLSVCAACLVVCGRGGATVGLASLVASQLVLLASLAPPPTPANLVTVFRSFIPAAVVWLRTGSDFAQVRQAD 544
            AA  VD VYGL P + TGGCVVQRSFED LRA  GVAS+ VHVAS P+SA+RVF+ L  + E EE+G G + SR+LI DGIALLF+R+ L  L   +  P  ++ GF+H PFSEPFYR+EPWLR ALPERML    +GA +R EE R+FGLLDKV+AVGA CR+LLTA + V E AI+++EPTF    P +++ + S             GV   A    V   R   FVSVGTLC RKGQL L+ A  AAC++ P +L GS LTLIGG  +D +YA  V     TA A D +            EVR+LG LP ++TLE +  SDAFLLNS  ESWAVAPVEAALRGVPV++TRVG L +SLP  ST+WVG  ++    D D         +   LAS  +W QALL FA  R+RL++EA RAV GL +RF R  A  +R +AV+ L+   +    +   A    S   G   L +     +        ++ER+RRA + +A+  VCA C+ + G GGA VGLA+LVA+Q +LL  LAPP +PANLVTVFRSFIP AVVW   GSDF QV  AD
Sbjct:   25 AANEVDFVYGLPPGSATGGCVVQRSFEDDLRAGPGVASVNVHVASDPASAKRVFELLRRQGELEERGVG-SPSRVLIIDGIALLFLRDRLHELVGGRGGPWNIVAGFIHCPFSEPFYREEPWLRVALPERMLQD-ESGAGIRAEERRLFGLLDKVIAVGAPCRTLLTADYGVREEAIVVVEPTFTAVAP-NVAVAASXXXXXXXXXXIEAGVVPPAASVDVSNERPPRFVSVGTLCPRKGQLGLIAALRAACASQPIKLGGSVLTLIGGEGADPSYAEAVRAAAATAGAGDESRGGAKVEGPGRLEVRLLGPLPREETLEHVGASDAFLLNSCSESWAVAPVEAALRGVPVLSTRVGWLAQSLPAESTIWVGSGREGRGPDSDGGGGIVAGGDGVGLASATEWGQALLRFAHARQRLRIEAERAVPGLAERFCRAVAADTRGQAVRTLM--ETTTGTRCTRASCGRSNLLGGFELSNGPTDPSTTTIPAVTDQERVRRATVNNALACVCATCVSISGAGGAAVGLAALVAAQCLLLVGLAPPCSPANLVTVFRSFIPPAVVWFMAGSDFGQVSMAD 595          
BLAST of mRNA_H-elongata_contig71533.14822.1 vs. uniprot
Match: A0A6H5L2X5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2X5_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 4.390e-23
Identity = 63/113 (55.75%), Postives = 76/113 (67.26%), Query Frame = 0
Query:    2 AAMAVDIVYGLHPDNTTGGCVVQRSFEDSLRA-AGVASIRVHVASTPSSAERVFQCLVEKE--KEEKGCGRTVSRLLIFDGIALLFMRNMLCAL---KENPTLLLVGFVHYPF 108
            AA  VD VYGLHP + TGGCVVQRSFED LRA  GVAS+ VHVAS  +SA+ VF  L  +   +EE+G G   SR LI DGIALLF+R+ L  L   +  P  ++ GF+H PF
Sbjct:   25 AAKEVDFVYGLHPSSATGGCVVQRSFEDDLRADPGVASVNVHVASDAASAKSVFDLLRRQGGVEEERGDGPP-SRALIIDGIALLFLRDRLHELVAGRGGPWSIVAGFIHCPF 136          
BLAST of mRNA_H-elongata_contig71533.14822.1 vs. uniprot
Match: A0A6I2FE04_9MICO (Glycosyltransferase n=2 Tax=Microbacterium sp. SYP-A9085 TaxID=2664454 RepID=A0A6I2FE04_9MICO)

HSP 1 Score: 58.2 bits (139), Expect = 3.620e-5
Identity = 46/133 (34.59%), Postives = 67/133 (50.38%), Query Frame = 0
Query:  222 FVSVGTLCRRKGQLELVTAFVAACSAHPRELSGSTLTLIGGADSDHAYAAKVVYTAAASDTAEVRVLGSLPHDQTLEILVGSDAFLLNSSLESWAVAPVEAALRGVPVVTTRVGVLEESLPPGSTMWVGRQQD 354
            FVSVG L   K    L+ AF    +AHPR    + L ++GG   +     + V  A   D A +    + P      IL  SD F+L+S+ E   +  +EAAL G+P+V+T  G + ++LP G T+ V  Q D
Sbjct:  663 FVSVGRLSTEKNHARLIRAFAHVHAAHPR----TRLAIVGGGPLEDDLR-RQVRDAGLQDAAFL----TGPRRNPFAILAASDCFVLSSTYEGQPMVLLEAALCGLPIVSTAFGSVRDALP-GDTIHVVDQSD 785          
BLAST of mRNA_H-elongata_contig71533.14822.1 vs. uniprot
Match: A0A0S4LHL6_9BACT (Glycosyl transferase group 1 n=2 Tax=Candidatus Nitrospira nitrificans TaxID=1742973 RepID=A0A0S4LHL6_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 4.240e-5
Identity = 51/142 (35.92%), Postives = 73/142 (51.41%), Query Frame = 0
Query:  223 VSVGTLCRRKGQLELVTAFVAACSAHPRELSGSTLTLIGGADSDHAYAA---KVVYTAAASDTAEVRVLGSLPHDQTLEILVGSDAFLLNSSLESWAVAPVEAALRGVPVVTTRV-GVLEESL--------PPGSTMWVGRQ 352
            +SVGTLC RKGQ +LV AF    S  P  LS     L+ G D   AYAA   K  +   A    ++R++   P +   E    +D F+L+S +ES+    +EA   G+P++TT V GV E+ +        PPG +  + RQ
Sbjct:  252 LSVGTLCDRKGQRDLVEAF----SMLPDALSRRIQILLVG-DGRGAYAAALKKRCHALPAPSRDKIRIIP--PTELIAEFYAAADLFVLSSKVESFPRVTLEAMAFGLPIITTPVFGVREQVVEGENALFYPPGDSRLLARQ 386          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71533.14822.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FTS5_ECTSI8.570e-14550.69Glycos_transf_1 domain-containing protein n=2 Tax=... [more]
A0A6H5L2X5_9PHAE4.390e-2355.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6I2FE04_9MICO3.620e-534.59Glycosyltransferase n=2 Tax=Microbacterium sp. SYP... [more]
A0A0S4LHL6_9BACT4.240e-535.92Glycosyl transferase group 1 n=2 Tax=Candidatus Ni... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001296Glycosyl transferase, family 1PFAMPF00534Glycos_transf_1coord: 222..354
e-value: 2.1E-11
score: 43.6
NoneNo IPR availableGENE3D3.40.50.2000coord: 221..392
e-value: 2.9E-20
score: 74.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..466
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 509..513
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 467..484
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 491..508
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 485..490
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 514..531
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 532..544
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 115..411

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71533contigH-elongata_contig71533:615..2990 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71533.14822.1mRNA_H-elongata_contig71533.14822.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71533 615..2990 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71533.14822.1 ID=prot_H-elongata_contig71533.14822.1|Name=mRNA_H-elongata_contig71533.14822.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=544bp
MAAMAVDIVYGLHPDNTTGGCVVQRSFEDSLRAAGVASIRVHVASTPSSA
ERVFQCLVEKEKEEKGCGRTVSRLLIFDGIALLFMRNMLCALKENPTLLL
VGFVHYPFSEPFYRKEPWLRAALPERMLVGPNAGAQLRKEETRMFGLLDK
VVAVGASCRSLLTAKHRVSESAIILLEPTFPMPPPLSMSASLSMTLKEFS
SESASGGVALLGTVRGGRGGGFVSVGTLCRRKGQLELVTAFVAACSAHPR
ELSGSTLTLIGGADSDHAYAAKVVYTAAASDTAEVRVLGSLPHDQTLEIL
VGSDAFLLNSSLESWAVAPVEAALRGVPVVTTRVGVLEESLPPGSTMWVG
RQQDAGDGDQDEDKALASVADWEQALLCFARDRKRLQVEAWRAVWGLRQR
FGREAESSRMRAVKALLLDHSLHLVKTPDAPIDDSAANGSSVLQDLTVTK
NKKKDEEELERERIRRAMIVHAVLSVCAACLVVCGRGGATVGLASLVASQ
LVLLASLAPPPTPANLVTVFRSFIPAAVVWLRTGSDFAQVRQAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001296Glyco_trans_1