prot_H-elongata_contig715.14813.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig715.14813.1
Unique Nameprot_H-elongata_contig715.14813.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length247
Homology
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A7S2DU63_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DU63_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 2.980e-20
Identity = 52/111 (46.85%), Postives = 75/111 (67.57%), Query Frame = 0
Query:    4 TLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF-YAFRHLPES 113
            T + LR++H LKY+AR+QLV FL   G+ V E+L+LWR EF + M P++Y +K+  YEYS+RH+YGLEG+RK + P SC +I     G   N  + +GCP+ +  R + ES
Sbjct:  191 TFKKLRQQHRLKYEARMQLVLFLKGVGLPVDEVLQLWRSEFRRVMTPDEYHKKK--YEYSIRHLYGLEGKRKDYSPYSCQQIIQ--KGPPRNSDHDYGCPWAHGTREMLES 297          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: D7FU99_ECTSI (Similar to DNA primase large subunit, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU99_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 6.960e-20
Identity = 47/59 (79.66%), Postives = 54/59 (91.53%), Query Frame = 0
Query:    1 MRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQ 59
            MRRTLRILRREHHLKYQAR+QL+SFL NAGM+V E+L LWREEF KGMP ++YARKR+Q
Sbjct:  419 MRRTLRILRREHHLKYQARLQLISFLRNAGMEVDEILGLWREEFPKGMPADEYARKRNQ 477          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A2L2YIM2_PARTP (DNA primase large subunit n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YIM2_PARTP)

HSP 1 Score: 80.9 bits (198), Expect = 7.780e-14
Identity = 46/113 (40.71%), Postives = 62/113 (54.87%), Query Frame = 0
Query:    1 MRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHLPES 113
            MR     LR+ HHLKY  R+Q   FL   G+ + + LR WREEF K M  + + +   QY Y++R+ YG EG+R  F P SC +I +    G G     HGCPF   +H  +S
Sbjct:  298 MRNLHETLRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDSDKFDK---QYTYNIRYNYGKEGKRANFSPYSCVKIITSNAPGPGEH---HGCPF---KHSDQS 401          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A4Y2B4J4_ARAVE (DNA primase large subunit n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2B4J4_ARAVE)

HSP 1 Score: 79.7 bits (195), Expect = 1.920e-13
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    8 LRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHLPES 113
            LR+ HHLKY  R+Q   FL   G+ + + LR WREEF K M  + + +   QY Y++R+ YG EG+R  F P SC +I +    G G     HGCPF   +H  +S
Sbjct:  304 LRKNHHLKYNGRLQYGLFLKGIGLSLDDALRFWREEFTKVMDVDKFDK---QYTYNIRYNYGKEGKRANFSPYSCMKIITSNAPGPGEH---HGCPF---KHSDQS 400          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A087SZT7_STEMI (DNA primase large subunit (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087SZT7_STEMI)

HSP 1 Score: 79.0 bits (193), Expect = 3.350e-13
Identity = 45/106 (42.45%), Postives = 60/106 (56.60%), Query Frame = 0
Query:    8 LRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHLPES 113
            LRR HHLKY  R+Q   FL   G+ + + LR WR+EF K M  + + +   QY Y++R+ YG EG+R  F P SC +I +    G G     HGCPF   +H  ES
Sbjct:  303 LRRNHHLKYNGRLQYGLFLKGIGLTLEDALRFWRQEFTKIMDNDKFDK---QYAYNIRYNYGKEGKRANFSPYSCVKIITTNAPGPGEF---HGCPF---KHSDES 399          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A6V7UAZ4_9BILA (Hypothetical protein n=3 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7UAZ4_9BILA)

HSP 1 Score: 73.2 bits (178), Expect = 7.980e-12
Identity = 43/103 (41.75%), Postives = 59/103 (57.28%), Query Frame = 0
Query:    8 LRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRHL 110
            LR+EHHL+Y AR Q   FL   G+ +   L  +R EF K M  + + +   QY Y++RH+YG+EG R   +P SC+ I     G + NG   HGCPF   RH+
Sbjct:   55 LRKEHHLRYNARNQYGLFLKGIGLSLEGALEFFRSEFTKRMDGDQFTK---QYRYNIRHMYGMEGNRIDKKPLSCSSIIL---GAAPNGIDCHGCPF---RHM 148          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A7S2EVH4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EVH4_TRICV)

HSP 1 Score: 73.2 bits (178), Expect = 8.770e-12
Identity = 44/110 (40.00%), Postives = 59/110 (53.64%), Query Frame = 0
Query:    8 LRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF--YAFRHLPESRN 115
            ++R+H L+Y AR+Q   FL   GM + E +  ++ EF K M  E + +   +Y YS+RHIYG EG+R    P SCA+I     G     G  HGCPF  Y   HL    N
Sbjct:   90 MKRDHKLRYGARLQYQLFLKGTGMSMDENVAFFQREFTKIMTSEKFVK---EYTYSIRHIYGREGKRTSKTPYSCAKIVL---GAPPQAGEHHGCPFRHYDQDHLSALLN 193          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A1B6I7N6_9HEMI (Uncharacterized protein (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6I7N6_9HEMI)

HSP 1 Score: 69.7 bits (169), Expect = 4.770e-11
Identity = 39/107 (36.45%), Postives = 57/107 (53.27%), Query Frame = 0
Query:    8 LRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAK-----GMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAFRH 109
            L+  H L + AR  L  FL + GM + E +  W+EE++K     G     + +   +Y YS+RH+YGLEG+R  +   SC++I +   G S  GG    CPF  F H
Sbjct:    2 LKINHRLSHHARFNLSLFLKDIGMTLNESISFWQEEYSKPSKCGGKCSHSWQKNGPKYIYSIRHLYGLEGKRANYCSPSCSKIQNNNLGPSEEGG----CPFLTFDH 104          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A3B4A007_9GOBI (DNA primase large subunit n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4A007_9GOBI)

HSP 1 Score: 72.4 bits (176), Expect = 5.840e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 0
Query:    1 MRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPF 104
            MR+  + LR  HHL++  R+Q   FL   G+ + + L+ WR EF +G    D   K  QY YS+RHI+G EGRR  + P SC ++        G+  Y HGCPF
Sbjct:  283 MRQLHQSLREHHHLRHGGRMQYGLFLKGIGLSLEQALQFWRSEFIRGKVDADKFDK--QYAYSIRHIFGKEGRRADYTPYSCMKVILSNMPSQGD--Y-HGCPF 381          
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Match: A0A0L0G302_9EUKA (DNA primase large subunit n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G302_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 1.430e-10
Identity = 37/97 (38.14%), Postives = 57/97 (58.76%), Query Frame = 0
Query:   11 EHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPPEDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGHGCPFYAF 107
            +HHLK+  R+Q   FL   G+ + + +  WR EF + M  + + R   ++ Y+LRH+YG EG+R  + P SC +I +G   G+G+    HGCPF  F
Sbjct:  305 DHHLKHWGRLQYGLFLKGIGVMLEDAINYWRSEFTQKMAMDKFDR---EHVYTLRHMYGKEGKRTNYTPYSCVKIITGQAPGTGDH---HGCPFKHF 395          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig715.14813.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2DU63_9STRA2.980e-2046.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7FU99_ECTSI6.960e-2079.66Similar to DNA primase large subunit, partial n=2 ... [more]
A0A2L2YIM2_PARTP7.780e-1440.71DNA primase large subunit n=2 Tax=Parasteatoda tep... [more]
A0A4Y2B4J4_ARAVE1.920e-1341.51DNA primase large subunit n=1 Tax=Araneus ventrico... [more]
A0A087SZT7_STEMI3.350e-1342.45DNA primase large subunit (Fragment) n=2 Tax=Stego... [more]
A0A6V7UAZ4_9BILA7.980e-1241.75Hypothetical protein n=3 Tax=Meloidogyne enterolob... [more]
A0A7S2EVH4_TRICV8.770e-1240.00Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A1B6I7N6_9HEMI4.770e-1136.45Uncharacterized protein (Fragment) n=1 Tax=Homalod... [more]
A0A3B4A007_9GOBI5.840e-1140.38DNA primase large subunit n=2 Tax=Periophthalmus m... [more]
A0A0L0G302_9EUKA1.430e-1038.14DNA primase large subunit n=1 Tax=Sphaeroforma arc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007238DNA primase large subunit, eukaryotic/archaealPFAMPF04104DNA_primase_lrgcoord: 1..105
e-value: 5.3E-23
score: 81.8
IPR007238DNA primase large subunit, eukaryotic/archaealPANTHERPTHR10537DNA PRIMASE LARGE SUBUNITcoord: 1..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig715contigH-elongata_contig715:6686..7893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig715.14813.1mRNA_H-elongata_contig715.14813.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig715 6668..9112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig715.14813.1 ID=prot_H-elongata_contig715.14813.1|Name=mRNA_H-elongata_contig715.14813.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=247bp
MRRTLRILRREHHLKYQARIQLVSFLANAGMDVGELLRLWREEFAKGMPP
EDYARKRSQYEYSLRHIYGLEGRRKMFRPQSCARIASGGWGGSGNGGYGH
GCPFYAFRHLPESRNGGCGLGGGSDASMLSGKRISDGRNGSITREMLTEQ
NLCVADIEDIVSPLESVPGPTKTGCCGGIGSAVSACSRHFSATHRWAAGG
FTWDGGSGELEASPNGWFAASNHSQPDAFMTQQKTRFGVAGDGAVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007238DNA_primase_lsu_euk/arc