prot_H-elongata_contig71495.14811.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71495.14811.1
Unique Nameprot_H-elongata_contig71495.14811.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length307
Homology
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A392NKU6_9FABA (WD repeat-containing protein 26-like (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NKU6_9FABA)

HSP 1 Score: 128 bits (322), Expect = 1.790e-32
Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 0
Query:   23 EEGPEERF--DKCIITGVCATRDGSDLLLHMSKGRILSWNTKAR-KTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            +E  +ERF  +  IIT    ++D   LL+++    I  WN +   K V +Y  H +SR+++ S  GG+  SF++SGSEDS VY+WHR  GDL  ALPGH+G VN V WNP  P MLAS SDD+TVR+W
Sbjct:   51 KETKDERFIEEDQIITSFSLSKDSRFLLVNLLNQEIHLWNIQGDPKLVGKYKSHRRSRFVIRSCFGGVKQSFISSGSEDSQVYIWHRNSGDLVDALPGHSGAVNCVSWNPANPHMLASASDDRTVRIW 178          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A0A9JJT6_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9JJT6_ARUDO)

HSP 1 Score: 127 bits (320), Expect = 1.860e-32
Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = 0
Query:   35 ITGVCATRDGSDLLLHMSKGRILSWNTKARKT-VKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            IT    + DG  LL++++   I  WN +     V RY GH +SR+++ S  GG   +F+ASGSEDS VY+WHR  GDL   LPGH+GTVN V WNP  P MLAS SDD T+R+W
Sbjct:   26 ITSFSLSEDGDFLLVNLTSQEIHLWNIRNGPIRVNRYSGHKRSRFVIRSCFGGSEQAFIASGSEDSQVYIWHRATGDLIETLPGHSGTVNCVSWNPANPHMLASASDDHTIRIW 139          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A7J8X7M7_GOSAI (Uncharacterized protein n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J8X7M7_GOSAI)

HSP 1 Score: 131 bits (329), Expect = 3.340e-32
Identity = 62/127 (48.82%), Postives = 82/127 (64.57%), Query Frame = 0
Query:   24 EGPEERF--DKCIITGVCATRDGSDLLLHMSKGRILSWNTKAR-KTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            E   ERF  +  +IT    +RD   LL+++    I  WN +   K V +Y GH ++R+I+ S  GGL  +F+ASGSEDSLVY+WHR  G+L   LPGH+G VN V WNP  P MLAS SDD+T+R+W
Sbjct:  178 EAKVERFIEEDQLITSFSLSRDSRFLLINLLNQEIHLWNIEGDPKLVSKYRGHKRTRFIIRSCFGGLEQAFIASGSEDSLVYIWHRGTGELIETLPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 304          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A2P5Y6X4_GOSBA (Uncharacterized protein n=3 Tax=Gossypium TaxID=3633 RepID=A0A2P5Y6X4_GOSBA)

HSP 1 Score: 130 bits (328), Expect = 4.030e-32
Identity = 64/127 (50.39%), Postives = 83/127 (65.35%), Query Frame = 0
Query:   24 EGPEERF--DKCIITGVCATRDGSDLLLHMSKGRILSWNTKAR-KTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            E   ERF  +   IT    +RD   LL+++    I  W+ +   K V +Y GH ++R+I+ S  GGL  +FVASGSEDSLVY+WHR  G+L  ALPGH+G VN V WNPT P MLAS SDD+T+R+W
Sbjct:  171 EAKVERFIEEDQTITSFSLSRDNRFLLVNLLNQEIHLWSIEDDLKLVSKYRGHKRTRFIIRSCFGGLEQAFVASGSEDSLVYIWHRGTGELIEALPGHSGAVNCVSWNPTNPHMLASASDDRTIRIW 297          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A8J5VKG9_ZIZPA (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5VKG9_ZIZPA)

HSP 1 Score: 126 bits (317), Expect = 4.890e-32
Identity = 61/127 (48.03%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   24 EGPEERF--DKCIITGVCATRDGSDLLLHMSKGRILSWNTK-ARKTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            E  +ER   ++  IT    + DG  LL++++   I  WN +     V RY GH +SR+++ S  GG   +F+ASGSEDS +Y+WHR  GDL   LPGH GTVN V WNP  P MLAS SDD TVR+W
Sbjct:   13 ETKQERLIEEENTITSFSLSEDGDFLLVNLTTEAIHLWNIRNCPIRVNRYAGHKRSRFVIRSCFGGSEQAFIASGSEDSQIYIWHRGTGDLIETLPGHTGTVNCVSWNPANPHMLASASDDHTVRIW 139          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: UPI001F5E55BE (WD repeat-containing protein 26 homolog isoform X1 n=1 Tax=Vigna umbellata TaxID=87088 RepID=UPI001F5E55BE)

HSP 1 Score: 129 bits (324), Expect = 6.220e-32
Identity = 64/128 (50.00%), Postives = 81/128 (63.28%), Query Frame = 0
Query:   23 EEGPEERFDKC--IITGVCATRDGSDLLLHMSKGRILSWNTKAR-KTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            +E  EERF +    IT    ++D   LL ++    I  WN +   K V +Y  H ++R+IV S  GGL  SF+ASGSEDS VY+WHR  GDL  ALPGH+G VN V WNP  P MLAS SDD+T+R+W
Sbjct:  124 KETKEERFIEAEETITSFSLSKDSRFLLANLLNQEIHLWNLEGDPKLVGKYRSHKRTRFIVRSCFGGLKQSFIASGSEDSQVYIWHRNSGDLVEALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 251          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A6P5MCB7_ARADU (LOW QUALITY PROTEIN: WD repeat-containing protein 26 n=3 Tax=Arachis TaxID=3817 RepID=A0A6P5MCB7_ARADU)

HSP 1 Score: 134 bits (336), Expect = 8.620e-32
Identity = 62/127 (48.82%), Postives = 84/127 (66.14%), Query Frame = 0
Query:   24 EGPEERF--DKCIITGVCATRDGSDLLLHMSKGRILSWNTKAR-KTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            E  +ERF  +   IT  C ++D + LL+++    I  WN +   + V +Y GH +SR+++ S  GGL  SF+ASGSEDS VY+WHR  G+L  ALPGH+G VN V WNP  P MLAS SDD+T+R+W
Sbjct:  400 ESKDERFIEEYQTITSFCLSKDSNFLLVNLLNQEIHLWNIEGEPELVGKYKGHRRSRFVIRSCFGGLKQSFIASGSEDSQVYIWHRSSGELLEALPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 526          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A833VL95_9POAL (WD repeat-containing protein 26 n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VL95_9POAL)

HSP 1 Score: 133 bits (334), Expect = 1.490e-31
Identity = 66/141 (46.81%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   14 HRKAGLCRI--EEGPEERF--DKCIITGVCATRDGSDLLLHMSKGRILSW---NTKARKTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            H K  + R+   E   ERF  ++ I+T  C + DG  LL++++   I  W   +      + RY GH ++RY++ S  GG    F+ASGSEDSLVY+WHR  GDL   L GH+GTVN V WNPT P MLAS SDD TVR+W
Sbjct:  370 HNKEKIIRLTDRETKTERFIEEEGIVTSFCLSSDGKFLLVNLACEEIHLWCIGDGGMPSLIMRYRGHRRARYVIRSCFGGTEQGFIASGSEDSLVYIWHRATGDLIETLAGHSGTVNCVSWNPTNPYMLASASDDHTVRIW 510          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A6A2XBH6_HIBSY (Transducin family protein / WD-40 repeat family protein isoform 2 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2XBH6_HIBSY)

HSP 1 Score: 131 bits (330), Expect = 1.510e-31
Identity = 62/127 (48.82%), Postives = 85/127 (66.93%), Query Frame = 0
Query:   27 EERFDKCI-----ITGVCATRDGSDLLLHMSKGRILSWNTKAR-KTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            EE+ ++ I     IT    +RD   LL+++    I  WN +   K V +Y GH ++R+I+ S  GGL+++F+ASGSEDSLVYLWHR  G+L  +LPGH+G VN V WNP  P MLAS SDD+T+R+W
Sbjct:  280 EEKVERFIEEDQPITSFSLSRDNRFLLVNLLNQEIHLWNIEGGLKLVSKYRGHKRNRFIIRSCFGGLDEAFIASGSEDSLVYLWHRGTGELIESLPGHSGAVNCVSWNPANPHMLASASDDRTIRIW 406          
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Match: A0A1D6PWK7_MAIZE (Leunig-related7 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6PWK7_MAIZE)

HSP 1 Score: 129 bits (324), Expect = 2.090e-31
Identity = 62/127 (48.82%), Postives = 78/127 (61.42%), Query Frame = 0
Query:   22 IEEGPEERFDKCIITGVCATRDGSDLLLHMSKGRILSWNTKARKT-VKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSLVYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLW 147
            IEEG         IT  C + DG  LL+++    I  WN +     V RY+GH ++R+++ S  GG   +F+ASGSEDS VY+WHR  GDL   L GH+GTVN V WNP  P MLAS SDD TVR+W
Sbjct:  174 IEEGS-------TITSFCLSEDGDFLLVNLVSEEIHLWNIRNDPVRVNRYNGHKRTRFVIRSCFGGFEQAFIASGSEDSQVYIWHRATGDLIETLAGHSGTVNCVSWNPANPHMLASASDDHTVRIW 293          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71495.14811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A392NKU6_9FABA1.790e-3248.44WD repeat-containing protein 26-like (Fragment) n=... [more]
A0A0A9JJT6_ARUDO1.860e-3250.88Uncharacterized protein n=1 Tax=Arundo donax TaxID... [more]
A0A7J8X7M7_GOSAI3.340e-3248.82Uncharacterized protein n=2 Tax=Gossypium TaxID=36... [more]
A0A2P5Y6X4_GOSBA4.030e-3250.39Uncharacterized protein n=3 Tax=Gossypium TaxID=36... [more]
A0A8J5VKG9_ZIZPA4.890e-3248.03Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
UPI001F5E55BE6.220e-3250.00WD repeat-containing protein 26 homolog isoform X1... [more]
A0A6P5MCB7_ARADU8.620e-3248.82LOW QUALITY PROTEIN: WD repeat-containing protein ... [more]
A0A833VL95_9POAL1.490e-3146.81WD repeat-containing protein 26 n=1 Tax=Carex litt... [more]
A0A6A2XBH6_HIBSY1.510e-3148.82Transducin family protein / WD-40 repeat family pr... [more]
A0A1D6PWK7_MAIZE2.090e-3148.82Leunig-related7 n=1 Tax=Zea mays TaxID=4577 RepID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 63..105
e-value: 2.9
score: 14.1
coord: 108..148
e-value: 6.6E-7
score: 38.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 66..104
e-value: 0.13
score: 13.2
coord: 113..147
e-value: 3.1E-4
score: 21.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 115..147
score: 12.681
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 14..158
e-value: 1.4E-20
score: 76.0
NoneNo IPR availablePANTHERPTHR22838:SF0WD REPEAT-CONTAINING PROTEIN 26coord: 34..182
NoneNo IPR availablePANTHERPTHR22838WD REPEAT PROTEIN 26-RELATEDcoord: 34..182
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 28..147
score: 14.582
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 34..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71495contigH-elongata_contig71495:817..3170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71495.14811.1mRNA_H-elongata_contig71495.14811.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71495 817..3170 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71495.14811.1 ID=prot_H-elongata_contig71495.14811.1|Name=mRNA_H-elongata_contig71495.14811.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=307bp
GGGSPASSRSSPGHRKAGLCRIEEGPEERFDKCIITGVCATRDGSDLLLH
MSKGRILSWNTKARKTVKRYHGHCQSRYIVHSTLGGLNDSFVASGSEDSL
VYLWHRKLGDLFAALPGHAGTVNSVHWNPTRPGMLASVSDDQTVRLWAPA
LPEPPLPPSPPLGESVRDGEIIYSPKGTPLGFASDVTGENVGARSSGKEG
GKLESGTVSSPRESSGNGSPGMGGGDTQVKRESGLKAFAEGQGGSGVPGR
GSYSGKGKGWSELDPKKLGSAAGDGGSAGARGRGQPAFGSAQTQGWEAWD
GGGMHGD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf