prot_H-elongata_contig71364.14798.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71364.14798.1
Unique Nameprot_H-elongata_contig71364.14798.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length210
Homology
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BLAST of mRNA_H-elongata_contig71364.14798.1 vs. uniprot
Match: A0A6H5L0F8_9PHAE (TPT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0F8_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 8.530e-61
Identity = 110/177 (62.15%), Postives = 135/177 (76.27%), Query Frame = 0 
Query:    1 MSSVKTAMLVAFMFALAAAQDRTSQEALKDLPLPWVIATLHFGAGMLWIFPAWTIGLRQTPSLNDLQRSKIAPLAFLHAAGHLCDLGVFGAGSMAVTHVFQAGEPLVVCLASWLAVEQA-QDLVAWFALVPLVAGVVITFREVVT-GSLVSHAVAACAVLVGGTRTALSQQVKLRDA 175
            MSS K A  VA MFAL AA DRTSQ AL++ PLPW++ATLHFGAG+LWIFPAWTIG+RQTP L+D Q+ ++APLAFLHAAGHLC   V GAGS+AVT VFQA EP+VV + S +      Q LVAW ALV   AGV++TF+E +T GS+V+++VAA A L+   RTALS QV + +A
Sbjct:    1 MSSAKAAAFVALMFALGAALDRTSQSALEEFPLPWMVATLHFGAGLLWIFPAWTIGMRQTPRLSDTQKKRVAPLAFLHAAGHLC---VLGAGSLAVTQVFQAAEPVVVSVMSLVVGSGGKQHLVAWLALVLATAGVLMTFQEGITAGSVVTNSVAAFAALLSSARTALSDQVMVEEA 174
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BLAST of mRNA_H-elongata_contig71364.14798.1 vs. uniprot
Match: D8LMY5_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMY5_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 1.340e-60
Identity = 110/177 (62.15%), Postives = 134/177 (75.71%), Query Frame = 0 
Query:    1 MSSVKTAMLVAFMFALAAAQDRTSQEALKDLPLPWVIATLHFGAGMLWIFPAWTIGLRQTPSLNDLQRSKIAPLAFLHAAGHLCDLGVFGAGSMAVTHVFQAGEPLVVCLASWLAVEQA-QDLVAWFALVPLVAGVVITFREVVT-GSLVSHAVAACAVLVGGTRTALSQQVKLRDA 175
            MSS K A  VA MFAL  A DRTSQ AL++ PLPW++ATLHFGAG+LWIFPAWTIG+RQTP L+D Q+ ++APLAFLHAAGHLC   V GAGS+AVT VFQA EP+VV + S +      Q LVAW ALV   AGV++TFRE +T GS+V+++VAA A L+   RTALS QV + +A
Sbjct:    1 MSSAKAAAFVALMFALGVALDRTSQSALEEFPLPWMVATLHFGAGLLWIFPAWTIGMRQTPRLSDTQKKRVAPLAFLHAAGHLC---VLGAGSLAVTQVFQAAEPVVVSVMSLVVGSGGKQHLVAWLALVLATAGVLMTFREGITAGSVVTNSVAAFAALLSSARTALSDQVMVEEA 174
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BLAST of mRNA_H-elongata_contig71364.14798.1 vs. uniprot
Match: A0A7S0DYK3_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0DYK3_9EUKA)

HSP 1 Score: 71.6 bits (174), Expect = 2.890e-11
Identity = 36/105 (34.29%), Postives = 55/105 (52.38%), Query Frame = 0 
Query:    2 SSVKTAMLVAFMFALAAAQDRTSQEALKDLPLPWVIATLHFGAGMLWIFPAWTIGLRQTPSLNDLQRSKIAPLAFLHAAGHLCDLGVFGAGSMAVTHVFQAGEPL 106
            S++K        + L    + ++   LK L LPW +A L  G G+L++ P W  GL + P L+      IAP+A +H AG    +   GAGS+A  +V ++ EPL
Sbjct:    6 SNLKIVCFFLLWYVLNVMYNESNMTVLKVLGLPWSLAALQLGLGLLYVVPKWATGLGKVPRLSQANLKAIAPIAMIHGAGQCVTVLACGAGSLAFVNVVKSLEPL 110
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BLAST of mRNA_H-elongata_contig71364.14798.1 vs. uniprot
Match: A0A6T8ALR7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8ALR7_9EUKA)

HSP 1 Score: 69.7 bits (169), Expect = 1.370e-10
Identity = 36/104 (34.62%), Postives = 54/104 (51.92%), Query Frame = 0 
Query:    2 SSVKTAMLVAFMFALAAAQDRTSQEALKDLPLPWVIATLHFGAGMLWIFPAWTIGLRQTPSLNDLQRSKIAPLAFLHAAGHLCDLGVFGAGSMAVTHVFQAGEP 105
            SSVK        + +    +  ++  LK L LPW +A L  G G+L++ P W  GL++ PSL       IAP+A +H  G    +   GAGS+A  +V ++ EP
Sbjct:    7 SSVKILFFFLIWYVINVVYNDMNKTVLKVLDLPWTMACLQLGLGLLYVGPLWLTGLKKAPSLTTSNVMTIAPIALIHGLGQCVTVLSLGAGSLAFVNVVKSLEP 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71364.14798.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L0F8_9PHAE8.530e-6162.15TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMY5_ECTSI1.340e-6062.15TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S0DYK3_9EUKA2.890e-1134.29Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A6T8ALR7_9EUKA1.370e-1034.62Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004853Sugar phosphate transporter domainPFAMPF03151TPTcoord: 5..169
e-value: 3.1E-18
score: 66.2
NoneNo IPR availablePANTHERPTHR11132:SF351XYLULOSE 5-PHOSPHATE/PHOSPHATE TRANSLOCATOR, CHLOROPLASTICcoord: 24..159
NoneNo IPR availablePANTHERPTHR11132SOLUTE CARRIER FAMILY 35coord: 24..159
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 54..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 167..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..116
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..145
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..122
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..97
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..19
score: 0.798
NoneNo IPR availableTMHMMTMhelixcoord: 122..139
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71364contigH-elongata_contig71364:1240..3120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71364.14798.1mRNA_H-elongata_contig71364.14798.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71364 1026..3186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71364.14798.1 ID=prot_H-elongata_contig71364.14798.1|Name=mRNA_H-elongata_contig71364.14798.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=210bp
MSSVKTAMLVAFMFALAAAQDRTSQEALKDLPLPWVIATLHFGAGMLWIF
PAWTIGLRQTPSLNDLQRSKIAPLAFLHAAGHLCDLGVFGAGSMAVTHVF
QAGEPLVVCLASWLAVEQAQDLVAWFALVPLVAGVVITFREVVTGSLVSH
AVAACAVLVGGTRTALSQQVKLRDARWVDTVLFLTRWLDGSERNEENGEV
PNKKKVRLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004853Sugar_P_trans_dom