prot_H-elongata_contig71246.14786.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71246.14786.1
Unique Nameprot_H-elongata_contig71246.14786.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length212
Homology
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: D7G2S4_ECTSI (PolyA_pol domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2S4_ECTSI)

HSP 1 Score: 368 bits (944), Expect = 5.730e-121
Identity = 183/218 (83.94%), Postives = 196/218 (89.91%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLS------GGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            MV+ E MGTTLRVAGGWVRDKL+GQEQG HQR L++V KMDIDIALDNCMGGDFA +L+RYLS      G + R SKVALIASNPEKSKHLETATLRID FWVDFVNLRTESY+QDSRIPSINIGTP ED+FRRDLTINSLFYNVNT TVEDYTGKGTSDLR GLVRTPLPPCETLLDDPLR LRAVRFASRLGF+VH EL++AGRDP+VHEALC KV
Sbjct:  141 MVEKEKMGTTLRVAGGWVRDKLVGQEQGFHQRHLSKVNKMDIDIALDNCMGGDFAARLNRYLSRRKSDPGARKRMSKVALIASNPEKSKHLETATLRIDNFWVDFVNLRTESYVQDSRIPSINIGTPMEDSFRRDLTINSLFYNVNTGTVEDYTGKGTSDLRLGLVRTPLPPCETLLDDPLRALRAVRFASRLGFRVHPELMEAGRDPKVHEALCMKV 358          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: A0A835ZFM7_9STRA (PolyA_pol domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM7_9STRA)

HSP 1 Score: 263 bits (671), Expect = 1.100e-81
Identity = 126/212 (59.43%), Postives = 165/212 (77.83%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V++E MGTTLRVAGGWVRDKL+G  +   + M+    KMD+DIALDNC+G  FA  ++R+L+    +++ V +++ NPEKSKHLETAT+ + GF +DFVNLRTESY  DSRIP++ IGTPE+DA+RRDLTIN+LFYN+NT  VED+TG+G +DL  G++ TPLP  +TLLDDPLRVLR++RFASR  F +  +LL A +DP VH AL  KV
Sbjct:   20 VVEEEAMGTTLRVAGGWVRDKLLGAARCGGEHMVGVDNKMDVDIALDNCLGKGFAETVNRHLAKKGMKSAAVGIVSKNPEKSKHLETATMHLLGFSIDFVNLRTESYTSDSRIPNMGIGTPEDDAYRRDLTINALFYNINTGLVEDFTGRGLTDLAAGVISTPLPAVDTLLDDPLRVLRSIRFASRFNFNMSQDLLMACKDPEVHVALAQKV 231          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: W7TAJ6_9STRA (Poly A polymerase, head domain protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAJ6_9STRA)

HSP 1 Score: 253 bits (646), Expect = 8.960e-80
Identity = 126/212 (59.43%), Postives = 159/212 (75.00%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V+DEN+GTTLRVAGGWVRDK++G      +        +DIDIALDN MG DFA  L+ +L+    +   V +I++NP KSKHLETAT+R+  F +DFVNLRTE+Y  +SRIPS+ IG+PEEDA RRDLTIN+LFYN++T  +ED+ G+G  D+R+G++RTPLP   TLLDDPLRVLRAVRFASRL F +  EL+ A  DPRVH AL  KV
Sbjct:  198 VVKDENLGTTLRVAGGWVRDKVLGHWSADGE--------VDIDIALDNLMGSDFAAMLNGWLAKRGRQVYNVGIISANPTKSKHLETATMRVGSFSIDFVNLRTEAYTDESRIPSMGIGSPEEDAMRRDLTINALFYNLHTGQIEDFCGRGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDELVVAASDPRVHGALAHKV 401          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: A0A4D9CTQ7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTQ7_9STRA)

HSP 1 Score: 253 bits (646), Expect = 7.820e-77
Identity = 126/212 (59.43%), Postives = 159/212 (75.00%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V+DEN+GTTLRVAGGWVRDK++G      +        +DIDIALDN MG DFA  L+ +L+    +   V +I++NP KSKHLETAT+R+  F +DFVNLRTE+Y  +SRIPS+ IG+PEEDA RRDLTIN+LFYN++T  +ED+ G+G  D+R+G++RTPLP   TLLDDPLRVLRAVRFASRL F +  EL+ A  DPRVH AL  KV
Sbjct:  173 VVKDENLGTTLRVAGGWVRDKVLGHWSADGE--------VDIDIALDNLMGSDFAAMLNGWLAKRGRQVYNVGIISANPTKSKHLETATMRVGSFSIDFVNLRTEAYTDESRIPSMGIGSPEEDAMRRDLTINALFYNLHTGQIEDFCGRGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDELVVAASDPRVHGALAHKV 376          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: A0A8J4PJG3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PJG3_9MYCE)

HSP 1 Score: 241 bits (615), Expect = 4.910e-74
Identity = 120/212 (56.60%), Postives = 154/212 (72.64%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V++ N  TTLRVAGGWVRDKL G +  SH          DIDI LDN MG  FA  ++ YL   Q +T ++ +I SNPE+SKHLETAT++I   W+DFVNLR+E+Y + SRIP I IGTP++DA RRDLTINSLFYN+N + VEDYTG G SDL+ G++RTPLPP  T LDDPLRV R++RFA+RL F +  EL+DA  +P +  A+ +K+
Sbjct:  100 VVKETNCKTTLRVAGGWVRDKLRGDD--SH----------DIDITLDNMMGESFAELVNNYLGNHQQKTHRIGVIQSNPEQSKHLETATVKIFDMWIDFVNLRSETYTEASRIPEITIGTPKDDALRRDLTINSLFYNINENRVEDYTGNGISDLKMGIIRTPLPPLTTFLDDPLRVFRSIRFATRLYFAIDKELMDAASNPLISNAIKSKI 299          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: Q54BQ2_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54BQ2_DICDI)

HSP 1 Score: 242 bits (617), Expect = 7.530e-74
Identity = 118/212 (55.66%), Postives = 154/212 (72.64%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +++D   GTTLRVAGGWVRDKL G +              DIDI LDN MG  FA  ++++LS    +T ++ +I SNPE+SKHLETAT+++   W+DFVNLR+ESY   SRIP I+IGTP +DA RRDLTINSLF+N+N + +ED+TG+G +DLRDG++RTPLP   T LDDPLRV R++RFASRL FK+  EL  AG DP V +A+ +K+
Sbjct:   85 VIRDSGCGTTLRVAGGWVRDKLRGDDSN------------DIDITLDNMMGEAFAELVNKHLSSKHHQTHRIGVIQSNPEQSKHLETATVKVFDMWIDFVNLRSESYTDTSRIPVISIGTPLQDALRRDLTINSLFFNINENRIEDFTGQGINDLRDGIIRTPLPSLTTFLDDPLRVFRSIRFASRLNFKIDEELFKAGSDPVVKDAIKSKI 284          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: F0ZVA3_DICPU (PolyA_pol domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZVA3_DICPU)

HSP 1 Score: 240 bits (613), Expect = 2.830e-73
Identity = 119/212 (56.13%), Postives = 155/212 (73.11%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V++ N GTTLRVAGGWVRDKL G +              DIDI LDN MG  FA  ++++LSG Q +T ++ +I SNPE+SKHLETAT++I   W+DFVNLR+E+Y  +SRIP I IGTP ED+ RRDLTINSLFYN+N + +ED+TGK  +DL  G++RTPLPP  T LDDPLRV R++RFASRL FK+  EL++A  +  V EA+ +K+
Sbjct:   84 VVRNSNCGTTLRVAGGWVRDKLRGDDSN------------DIDITLDNMMGESFAELVNKHLSGKQHQTHRIGVIQSNPEQSKHLETATVKIFDLWIDFVNLRSETYTDNSRIPEIKIGTPLEDSLRRDLTINSLFYNINENKIEDFTGKAITDLNLGIIRTPLPPLTTFLDDPLRVFRSIRFASRLYFKIDQELVEAASNAVVKEAIKSKI 283          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: A0A5J4Z172_PORPP (CCA tRNA nucleotidyltransferase, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z172_PORPP)

HSP 1 Score: 240 bits (612), Expect = 3.470e-73
Identity = 121/212 (57.08%), Postives = 148/212 (69.81%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V+  N+  TLRVAGGWVRDKL G +          +E +DIDIALD  +G +FA   + YL   +    ++A+I  NP++SKHLETA + + G W+DFVNLRTE Y  DSRIP I IGTP EDA RRDLTIN+LFYN+N DTVED+TG G SDL   ++RTPL P  TLLDDPLR LRA+RF SRL F V  +L  A  DPRVH+AL +KV
Sbjct:   37 VVEKNNLDVTLRVAGGWVRDKLFGSQ----------MEHVDIDIALDTMLGREFAELANEYLQKHEEERHRIAVIQRNPDQSKHLETARMLMFGLWIDFVNLRTEKYTHDSRIPEIEIGTPFEDAMRRDLTINALFYNINNDTVEDFTGLGISDLEKRIIRTPLHPLTTLLDDPLRALRAIRFTSRLNFSVDPDLYAAMSDPRVHQALLSKV 238          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: UPI0006449D42 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449D42)

HSP 1 Score: 241 bits (614), Expect = 8.280e-73
Identity = 120/212 (56.60%), Postives = 154/212 (72.64%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V+    GTTLRVAGGWVRDKL G +              DIDIALDN MG  FA  +++YL      T ++ +I SNP +SKHLETAT+RI   W+DFVNLR+E+Y ++SRIP+I IGTP+EDAFRRDLTINSLFYN+N + +ED+TG G +DL  G+VRTPLPP  T LDDPLRVLR++RFA+RL + +  +L++A   P+V EAL +KV
Sbjct:  120 VVEKSKCGTTLRVAGGWVRDKLRGDDSS------------DIDIALDNLMGEAFASLVNQYLQDHNQETHRIGVIQSNPSQSKHLETATVRIFDMWIDFVNLRSETYTEESRIPTIQIGTPQEDAFRRDLTINSLFYNINENKIEDFTGNGINDLMCGIVRTPLPPQTTFLDDPLRVLRSIRFATRLYYAIDHKLVEAASSPKVKEALKSKV 319          
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Match: A0A7S2V443_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V443_9STRA)

HSP 1 Score: 239 bits (609), Expect = 4.530e-72
Identity = 129/216 (59.72%), Postives = 159/216 (73.61%), Query Frame = 0
Query:    1 MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVE--KMDIDIALDNCMGGDFAVKLSRYLSGGQSRTSK-VALIASNPEKSKHLETATLRIDGFWVDFVNLRTESYLQDSRIP-SINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGKGTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGRDPRVHEALCTKV 212
            +V+D  MGTTLRVAGGWVRDKL+ +   S      R     +DIDIALDN +G DFA  ++ +L     RTSK VA+++ NPEKSKHLETAT+++ GF +DFVNLRTE Y +DSRIP ++ IGTP EDA RRDLTINSLFYN+NT  VED+TG G  DL   +V TPLP   TL DDPLR LRA+RFA+R GF +  +LL+A R+P+VH+AL TKV
Sbjct:   83 IVEDYRMGTTLRVAGGWVRDKLLHEHMSSRNVRSKRSGDVNVDIDIALDNMLGQDFAKTINDWLKQ-HGRTSKHVAVVSRNPEKSKHLETATMKLGGFSIDFVNLRTECYSEDSRIPETMCIGTPYEDALRRDLTINSLFYNINTGCVEDWTGAGVKDLERQVVATPLPALTTLRDDPLRALRAIRFAARFGFTMADDLLNACRNPQVHQALLTKV 297          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71246.14786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2S4_ECTSI5.730e-12183.94PolyA_pol domain-containing protein n=2 Tax=Ectoca... [more]
A0A835ZFM7_9STRA1.100e-8159.43PolyA_pol domain-containing protein n=1 Tax=Tribon... [more]
W7TAJ6_9STRA8.960e-8059.43Poly A polymerase, head domain protein n=1 Tax=Nan... [more]
A0A4D9CTQ7_9STRA7.820e-7759.43Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J4PJG3_9MYCE4.910e-7456.60Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
Q54BQ2_DICDI7.530e-7455.66Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
F0ZVA3_DICPU2.830e-7356.13PolyA_pol domain-containing protein n=1 Tax=Dictyo... [more]
A0A5J4Z172_PORPP3.470e-7357.08CCA tRNA nucleotidyltransferase, mitochondrial n=1... [more]
UPI0006449D428.280e-7356.60hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A7S2V443_9STRA4.530e-7259.72Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3090.10coord: 161..212
e-value: 1.3E-9
score: 40.2
NoneNo IPR availableGENE3D3.30.460.10coord: 2..156
e-value: 8.5E-34
score: 118.5
NoneNo IPR availablePANTHERPTHR13734TRNA-NUCLEOTIDYLTRANSFERASEcoord: 3..212
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 6..157
NoneNo IPR availableSUPERFAMILY81891Poly A polymerase C-terminal region-likecoord: 159..206
IPR002646Poly A polymerase, head domainPFAMPF01743PolyA_polcoord: 11..161
e-value: 5.5E-27
score: 94.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71246contigH-elongata_contig71246:696..2821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71246.14786.1mRNA_H-elongata_contig71246.14786.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71246 696..2830 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71246.14786.1 ID=prot_H-elongata_contig71246.14786.1|Name=mRNA_H-elongata_contig71246.14786.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=212bp
MVQDENMGTTLRVAGGWVRDKLIGQEQGSHQRMLARVEKMDIDIALDNCM
GGDFAVKLSRYLSGGQSRTSKVALIASNPEKSKHLETATLRIDGFWVDFV
NLRTESYLQDSRIPSINIGTPEEDAFRRDLTINSLFYNVNTDTVEDYTGK
GTSDLRDGLVRTPLPPCETLLDDPLRVLRAVRFASRLGFKVHSELLDAGR
DPRVHEALCTKV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002646PolA_pol_head_dom