prot_H-elongata_contig7117.14777.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7117.14777.1
Unique Nameprot_H-elongata_contig7117.14777.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length97
Homology
BLAST of mRNA_H-elongata_contig7117.14777.1 vs. uniprot
Match: D7FR92_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR92_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.430e-22
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 0
Query:    1 MRWMTGMGENSSNSW---EIWWREENAYLSRFSLTQKMQLLLRPLIYVLIGYGIGGPQLMRLNHDEIQV 66
            MRWMTG G N        E+WWREEN+YLSRFSLTQKMQ L+RPLIYV+IGYGIGGPQL+ L+H E++V
Sbjct:   55 MRWMTGTGGNRLQQLGVSEVWWREENSYLSRFSLTQKMQGLVRPLIYVVIGYGIGGPQLLGLDHKELKV 123          
BLAST of mRNA_H-elongata_contig7117.14777.1 vs. uniprot
Match: A0A835Z1S2_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1S2_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 4.040e-16
Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 0
Query:    1 MRWMTGMGENSSNSWEIWWREENAYLSRFSLTQKMQLLLRPLIYVLIGYGIGGPQLMRL 59
            MRWM+G G +SSNSWE+WWRE+N Y+S+F L QK+Q +L+P  Y++IG GI  P++  L
Sbjct: 1975 MRWMSGTGGSSSNSWEVWWREDNGYMSKFGLGQKLQCMLKPAFYLVIGVGIATPKMAEL 2033          
BLAST of mRNA_H-elongata_contig7117.14777.1 vs. uniprot
Match: A0A835Z4B5_9STRA (1,3-beta-glucan synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4B5_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.460e-12
Identity = 27/48 (56.25%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    1 MRWMTGMGENSSNSWEIWWREENAYLSRFSLTQKMQLLLRPLIYVLIG 48
            +RWM+G G +SSNSW++WWREEN Y+S+F L QK+Q +L+P  Y+++G
Sbjct: 1576 VRWMSGTGGSSSNSWDVWWREENLYVSKFGLGQKLQCMLKPAFYLVVG 1623          
BLAST of mRNA_H-elongata_contig7117.14777.1 vs. uniprot
Match: A0A6H5JFR3_9PHAE (1,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR3_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 1.940e-10
Identity = 34/66 (51.52%), Postives = 41/66 (62.12%), Query Frame = 0
Query:    1 MRWMTGMGENSSNSWEIWWREENAYLSRFSLTQKMQLLLRPLIYVLIGYGIGGPQLMRLNHDEIQV 66
            MRWMTG G NSSNSWE                     L+RPLIYV+IGYG+GGPQL+ L+H E++V
Sbjct: 1889 MRWMTGTGGNSSNSWEG--------------------LVRPLIYVVIGYGVGGPQLLGLDHKELKV 1934          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7117.14777.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FR92_ECTSI1.430e-2269.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z1S2_9STRA4.040e-1655.931,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A835Z4B5_9STRA2.460e-1256.251,3-beta-glucan synthase n=1 Tax=Tribonema minus T... [more]
A0A6H5JFR3_9PHAE1.940e-1051.521,3-beta-glucan synthase n=1 Tax=Ectocarpus sp. CC... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..96
NoneNo IPR availableTMHMMTMhelixcoord: 37..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7117contigH-elongata_contig7117:1017..2014 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7117.14777.1mRNA_H-elongata_contig7117.14777.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7117 912..2079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7117.14777.1 ID=prot_H-elongata_contig7117.14777.1|Name=mRNA_H-elongata_contig7117.14777.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=97bp
MRWMTGMGENSSNSWEIWWREENAYLSRFSLTQKMQLLLRPLIYVLIGYG
IGGPQLMRLNHDEIQVCKYYDGFTNDLAYARSEDSRSKGTVRRVNL*
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