prot_H-elongata_contig711.14773.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig711.14773.1
Unique Nameprot_H-elongata_contig711.14773.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length164
Homology
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: A0A6H5JJ59_9PHAE (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ59_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.390e-25
Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 0
Query:   51 RKEMEMLSDTKRGWRGR-SGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVSII 164
            RKEMEMLSD KRGW+GR  GV  + N   ++G I  + + RR      +A  G +  G L APKD+AQFQR WRRRCR + +RR Y+RL+GP     LFRVEMEP +L Q++S++
Sbjct:   68 RKEMEMLSDPKRGWQGRVGGVAPTTN---VSGRIGRQKAPRRTQRSVDTALRGGAKAGPLRAPKDHAQFQRDWRRRCRTNGERRDYLRLVGPKNASALFRVEMEPDVLGQVISVV 179          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: A0A7S4DL22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL22_HETAK)

HSP 1 Score: 101 bits (251), Expect = 5.840e-24
Identity = 60/151 (39.74%), Postives = 88/151 (58.28%), Query Frame = 0
Query:   12 QDDERRKKADAMKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVS 162
            +DD   ++ D MKKRA+H A +YDEFR+MV CA+  PVTRKE+E LS   +GW      Q+S+ ++ L G     SS R     G    +  S +  L  PK+  +F+R WRR+C  D  +  Y+RL+GP RL  LF  +++  +L Q++ 
Sbjct:   26 EDDRNYQRTDDMKKRAIHVAGTYDEFRNMVLCANQQPVTRKELESLSKPSKGW------QNSRTQSGLPGT----SSARAKKKTG-QGEIKASKK--LEVPKNSVEFERDWRRKCNTDLKKIKYLRLVGPRRLAALFAGDLDAALLGQLLG 163          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: D7G465_ECTSI (RPAP3_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G465_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 7.300e-21
Identity = 54/112 (48.21%), Postives = 72/112 (64.29%), Query Frame = 0
Query:   54 MEMLSDTKRGWRGR-SGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVSII 164
            MEMLS  KRGW+GR  GV  +    K++G    + + RR      +A  G +  G L APKD+AQFQR WRRRC  + +RR Y+RLIGP  +  LFRVEMEP +L Q++S++
Sbjct:    1 MEMLSVPKRGWQGRVGGVAPT---TKVSGSTGRQKAPRRTQRSVDTAISGGAKAGPLRAPKDHAQFQRDWRRRCCTNGERRDYLRLIGPKNVSALFRVEMEPDVLGQVLSVV 109          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: A0A1V9Z2T7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z2T7_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.400e-17
Identity = 57/165 (34.55%), Postives = 85/165 (51.52%), Query Frame = 0
Query:    1 FQTVRILRVLCQ---DDERRKKADAMKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVS 162
            F T  + + L Q   +D + K  D MKKRA+HTA+SYDEF++ V CA L PV+ KE++ LS ++R    R+ + H K  +  A             T G+     +S       PK   +F R W+R C +D  +  Y+ L  P RL  LF+ EM+  + A +V+
Sbjct:    9 FDTASLQKELVQALEEDRKYKATDEMKKRAIHTASSYDEFKNFVLCADLKPVSSKELQNLSKSERQ---RNRLYHKKAASVRA-------------TTGTLTGSNDSRR----PPKSSVEFLRTWKRSCTSDAGKYEYLVLTSPARLGKLFQAEMDADLFADIVA 153          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: A0A6G0X454_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X454_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.740e-17
Identity = 54/156 (34.62%), Postives = 77/156 (49.36%), Query Frame = 0
Query:    7 LRVLCQDDERRKKADAMKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVS 162
            L +  ++D + KK D MKKRA+HTA SYDEFR+ V CA L PV+ K+++ LS + R  R     Q   N    A   K  S+ ++   P +S +                 F R WRR C    D+  YMRL  P R   +F  E+E  ++ Q++ 
Sbjct:   18 LAIALEEDRKYKKTDEMKKRAIHTAASYDEFRNFVLCADLKPVSSKDLQNLSKSDR--RRNRMYQTKPNNPLDASRAKTLSACKKTTPPDTSGD-----------------FLRTWRRSCPTHRDKYQYMRLTTPARFRKMFASELEADLMIQLIE 154          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: T0S406_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S406_SAPDV)

HSP 1 Score: 84.0 bits (206), Expect = 9.290e-17
Identity = 57/165 (34.55%), Postives = 86/165 (52.12%), Query Frame = 0
Query:    1 FQTVRILRVLCQ--DDERRKKA-DAMKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVS 162
            F T  + + L Q  D++R+ KA D MKKRA+HTA SYDEF++ V CA L PV+ KE++ LS ++R           +NR     L  +KSS  +   P +     ++       PK   +FQR W+R C  D  +  Y+    P RL  LF+ E++  +   +V+
Sbjct:    9 FDTASLQKELAQALDEDRKYKATDEMKKRAIHTAASYDEFKNFVLCADLKPVSSKELQNLSKSER----------QRNR-----LYHKKSSSIKATRPATLTGADDA------PPKSSVEFQRTWQRSCSTDAAKLQYLERTTPARLAKLFQAEIDADLFGSIVA 152          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: A0A2D4CAL4_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAL4_PYTIN)

HSP 1 Score: 79.3 bits (194), Expect = 2.980e-15
Identity = 45/142 (31.69%), Postives = 79/142 (55.63%), Query Frame = 0
Query:   23 MKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVSII 164
            MKKRA+HTA SYDEF+++V+CA L PV+++E+     ++R                LA  +K K+S ++ P    +A+L E+   ++  P     F R WRR  ++  D+  Y+ L    RL T+F+ +++  +L ++V ++
Sbjct:    1 MKKRAIHTAASYDEFKNLVACADLKPVSQRELRNFXSSERS-------------TNLAYRMKSKASRKKAPI---AASLNETAATMVTPPSSAVDFCRQWRRHLKSTADKFRYLELTTAERLATMFKNDIDADLLVEIVQVL 126          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: K3WRK5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WRK5_GLOUD)

HSP 1 Score: 80.1 bits (196), Expect = 3.270e-15
Identity = 51/167 (30.54%), Postives = 88/167 (52.69%), Query Frame = 0
Query:    1 FQTVRILRVLCQ---DDERRKKADAMKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVSII 164
            F T  + + L Q   DD   K  D+MKKRA+HTAT+YDEF+++V+CA L P++++E+   S  +R             +  L+  +K + +F      G    L      L   P +  +F R WRR  +++ ++  Y+ L  P RL  +F+ +M+  ++A++V I+
Sbjct:   18 FDTAALQQELAQALEDDRVYKLTDSMKKRAIHTATNYDEFKNLVACADLKPISQRELRDFSRNER-------------QTNLSYKMKARKAF------GRDLQLKAPLTALNQPPANAVEFCRNWRRYLKSNDEKLRYLMLTTPARLSEIFKSDMDADLMAEIVQIL 165          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: A0A1V9Z8T6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Z8T6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.410e-15
Identity = 55/151 (36.42%), Postives = 77/151 (50.99%), Query Frame = 0
Query:   12 QDDERRKKADAMKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVS 162
            ++D + K  D MKKRA+HTA SYDEFR+ V CA L PVT KE++ LS ++R            NR     L K+KS  R          L  + +     PK  A+F R W+R C ++  +  Y+ L  P RL  LF+ E+E  +   +V 
Sbjct:   23 EEDRKYKATDEMKKRAIHTAGSYDEFRNFVLCADLNPVTSKELQNLSKSQR----------QPNR-----LYKKKSQTRER------VKLLNATDNFAI-PKTSAEFLRNWKRNCSSNALKYEYLVLTTPERLGRLFQAEIEADLFVNIVD 151          
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Match: W4H561_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H561_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-14
Identity = 48/158 (30.38%), Postives = 83/158 (52.53%), Query Frame = 0
Query:    9 VLCQDDERRKKADAMKKRAVHTATSYDEFRHMVSCAHLTPVTRKEMEMLSDTKR----GWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSANLGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRVEMEPHILAQMVS 162
            +  ++D + K  D MKKRA+HTA SYD+FR+ V CA L PV+ KE++ LS ++R    G++ +S +    ++AK                      +G+ +  +   P    +F R WRR C    D+  Y+++  P R+  LF+ E++  ++ Q+V+
Sbjct:   20 IALEEDRKYKLTDDMKKRAIHTAASYDDFRNFVLCADLKPVSSKELQNLSKSERKRNRGYQTKSLLHVDTSKAKTL--------------------VGKQDAAV--PPATSVEFIRTWRRSCLTQRDKYKYLQVTTPPRVAKLFQAELDSDLMLQIVA 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig711.14773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJ59_9PHAE1.390e-2551.30RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S4DL22_HETAK5.840e-2439.74Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7G465_ECTSI7.300e-2148.21RPAP3_C domain-containing protein n=1 Tax=Ectocarp... [more]
A0A1V9Z2T7_9STRA1.400e-1734.55Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0X454_9STRA5.740e-1734.62Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
T0S406_SAPDV9.290e-1734.55Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A2D4CAL4_PYTIN2.980e-1531.69Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K3WRK5_GLOUD3.270e-1530.54Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9Z8T6_9STRA3.410e-1536.42Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
W4H561_9STRA1.200e-1430.38Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025986RNA-polymerase II-associated protein 3-like, C-terminal domainPFAMPF13877RPAP3_Ccoord: 111..163
e-value: 5.3E-8
score: 33.3
IPR031733Dynein attachment factor, N-terminalPFAMPF15867Dynein_attach_Ncoord: 11..64
e-value: 5.5E-16
score: 58.3
NoneNo IPR availablePANTHERPTHR28572:SF1COILED-COIL DOMAIN-CONTAINING PROTEIN 103coord: 12..163
IPR042422Coiled-coil domain-containing protein 103PANTHERPTHR28572FAMILY NOT NAMEDcoord: 12..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig711contigH-elongata_contig711:5696..6685 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig711.14773.1mRNA_H-elongata_contig711.14773.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig711 5696..6685 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig711.14773.1 ID=prot_H-elongata_contig711.14773.1|Name=mRNA_H-elongata_contig711.14773.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=164bp
FQTVRILRVLCQDDERRKKADAMKKRAVHTATSYDEFRHMVSCAHLTPVT
RKEMEMLSDTKRGWRGRSGVQHSKNRAKLAGLIKEKSSFRRNPTPGSSAN
LGESNEGLLCAPKDYAQFQRIWRRRCRNDHDRRTYMRLIGPGRLPTLFRV
EMEPHILAQMVSII
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025986RPAP3-like_C
IPR031733Dynein_attach_N
IPR042422CC103