prot_H-elongata_contig71094.14771.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71094.14771.1
Unique Nameprot_H-elongata_contig71094.14771.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length177
Homology
BLAST of mRNA_H-elongata_contig71094.14771.1 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 9.770e-31
Identity = 100/188 (53.19%), Postives = 122/188 (64.89%), Query Frame = 0
Query:    1 DADALLARLAGKAKKAAAAAMSASRA-GTTTPFLPVSLDDDENLEKEVPRNAKADHHACVSDGASGFAYAG-----GAAV-----------EMVAKAA--TVPVAAAGVGAMAVDG-ARLAQLCKEDKAKVARLMQDLAKLRSEKDAQKARFERLRAQNEDIVREVARLRVKFGQSIQLLRKYQVFVR 168
            DA+ALLARLAGKAK+AAA A+SAS A G  TP  P +      +   V RN K+     ++D A    ++G     GAA+           E +A A    VP  AA  G +A+DG ARLA+LC+EDK KVARLMQDL KLR EK+ QK RFERLRAQNE IV+E+A L+VKFGQS+QLLRKYQ  V+
Sbjct:  212 DAEALLARLAGKAKQAAAVALSASAASGGMTPD-PTARAAPTGI---VTRNVKSAGVESITDAAVRVRFSGDTGHVGAAIRRSTTGEECRDESMATAVGRQVPEVAAAAGGVAIDGGARLAELCQEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKEMAGLKVKFGQSMQLLRKYQSIVQ 395          
BLAST of mRNA_H-elongata_contig71094.14771.1 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 2.430e-30
Identity = 98/193 (50.78%), Postives = 118/193 (61.14%), Query Frame = 0
Query:    1 DADALLARLAGKAKKAAAAAMSASRA-GTTTPFLPVSLDDDENLEKEVPRNAKADHHACVSDGASGFAYAG-----GAAVE-------------MVAKAATVPVAAAGVGAMAVDG-ARLAQLCKEDKAKVARLMQDLAKLRSEKDAQKARFERLRAQNEDIVREVARLRVKFGQSIQLLRKYQVFVRSVSVA 173
            DA+ALLARLAGKAK+AAA A+SAS A G  TP L             V RN K+     ++D      ++G     GAA++             + A    VP  AA  G +AVDG ARLA+LCKEDK KVARLMQDL KLR EK+ QK RFERLRAQNE IV+++A L+ KFGQS+QLLRKYQ  V+    A
Sbjct:  123 DAEALLARLAGKAKQAAAVALSASAASGGMTPDLTARSAPTGT----VTRNVKSAGVESITDATVRVRFSGDKGHLGAAIKRGTTGEDCRDESTVTAVGRQVPEVAAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKQMAGLKDKFGQSMQLLRKYQSIVQEGGAA 311          
BLAST of mRNA_H-elongata_contig71094.14771.1 vs. uniprot
Match: A0A835Z7B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B7_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.380e-8
Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   98 ARLAQLCKEDKAKVARLMQDLAKLRSEKDAQKARFERLRAQNEDIVREVARLRVKFGQSIQLLRKYQ 164
            ARL  LC  DKAKVA+LMQ+L+  ++E  A+  R ERLRAQN +IV E A  R +  Q++ LL+KYQ
Sbjct:   44 ARLVDLCPSDKAKVAKLMQELSAAQAEAAARAHRLERLRAQNAEIVAETADTRSRLTQAVLLLKKYQ 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71094.14771.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K9R0_9PHAE9.770e-3153.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS85_ECTSI2.430e-3050.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z7B7_9STRA8.380e-853.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71094contigH-elongata_contig71094:12..1080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71094.14771.1mRNA_H-elongata_contig71094.14771.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71094 12..1080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71094.14771.1 ID=prot_H-elongata_contig71094.14771.1|Name=mRNA_H-elongata_contig71094.14771.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=177bp
DADALLARLAGKAKKAAAAAMSASRAGTTTPFLPVSLDDDENLEKEVPRN
AKADHHACVSDGASGFAYAGGAAVEMVAKAATVPVAAAGVGAMAVDGARL
AQLCKEDKAKVARLMQDLAKLRSEKDAQKARFERLRAQNEDIVREVARLR
VKFGQSIQLLRKYQVFVRSVSVALTD*
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