prot_H-elongata_contig71032.14766.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig71032.14766.1
Unique Nameprot_H-elongata_contig71032.14766.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length268
Homology
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: D7FJB4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJB4_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 3.630e-91
Identity = 142/274 (51.82%), Postives = 179/274 (65.33%), Query Frame = 0
Query:    2 LYGACKFC-SDALPCYRFSTTTCRPELCVCNHGAVHHTALDLKSV------MEEANGEERFD-RSSHPRSVHLRATTQHGPPLAKLLRRCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            L+GAC+ C +  + C+RFS+T CRPELCVC HG+ HH  +D ++       + E  GE     R++        A+ +       LLRR   F+ SIG AG+RD+LGLKRT GS+DG LPPSRR LL A+N+PHL                 AA+  ++RS       R T +C L+VGGRALCKHA+R REGWWG CGGTE EKN+ AE + L +LA ATW+N+H FGGGG+DGVLE+R+  GYGARWS DG VFRGFLEPH +DGH +GWRH
Sbjct:  147 LFGACEMCETTVVKCHRFSSTPCRPELCVCTHGSSHHACIDPRATPISLPALTERPGENVVGARATCDSRTTQSASARWNLAAVDLLRRGEKFISSIGQAGIRDLLGLKRTVGSIDGCLPPSRRVLLKAINKPHLLVVSEGCAGTRSSGSCLAADGSQKRSEGRAILPRATTVCILTVGGRALCKHAVRAREGWWGECGGTEAEKNDHAEEVTLRLLAGATWVNLHVFGGGGKDGVLEIREESGYGARWSADGAVFRGFLEPHMKDGHEKGWRH 420          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A3M6V321_POCDA (Uncharacterized protein n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6V321_POCDA)

HSP 1 Score: 125 bits (315), Expect = 3.470e-31
Identity = 73/178 (41.01%), Postives = 92/178 (51.69%), Query Frame = 0
Query:   90 IGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            +G  G+ D+L ++ T GS+D   PP  + L+ + NE H  KP                                     L+VG RAL KH  R    WWGAC G+E  KNE A  +V+ IL  A+WINIH      +  V+EVR  +GYGARWS DG VFRGFLEP  EDGH+ GW+H
Sbjct:  129 LGVRGLLDLLNIRHTQGSVD-IFPPPVKVLIESFNEKH--KPNAN----------------------------------LTVGARALSKHCHRDSSEWWGACAGSEQVKNEHAITVVMRILEDASWINIHLLPH--ELKVIEVRCTEGYGARWSHDGKVFRGFLEPQMEDGHAAGWKH 267          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: UPI000C04626F (uncharacterized protein LOC111339424 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04626F)

HSP 1 Score: 124 bits (310), Expect = 1.890e-30
Identity = 70/178 (39.33%), Postives = 89/178 (50.00%), Query Frame = 0
Query:   90 IGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            +G  G+ D+L ++RT GS+D   P     L+ + N+ H                                         L+VG RAL KH  R    WWG C G+E  KNE A  +V+ IL  A+WINIH    G +  V+EVR  +GYGARWS DG VFRGFLEP  EDGH+ GW+H
Sbjct:  129 LGVRGLLDLLNIRRTQGSVD-IFPSPVEVLIESFNKKHRPN------------------------------------ANLTVGARALSKHCHRDSSEWWGVCAGSEQVKNEHANTVVMRILEDASWINIHCLPHGLK--VIEVRCIEGYGARWSYDGKVFRGFLEPQMEDGHAVGWKH 267          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A7S1C8E3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8E3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.240e-30
Identity = 68/177 (38.42%), Postives = 88/177 (49.72%), Query Frame = 0
Query:   91 GPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            G   V  +LG++RT  S+   LPPSR  L  +    H    +  T                 R+ PS+          L+VG RAL KH  R   GWWGA  G+E  KN     ++  +L  ATW+N+H         ++EVR A GYGARW+ DG  FRGFLEPH  DGH+ GW+H
Sbjct:    9 GVRAVMHLLGMRRTFKSVT-LLPPSRAVLCASFEALHSQHAVPATS----------------RAKPSQ----------LTVGARALAKHCHRASSGWWGAAAGSEAAKNAWGREVLARVLDGATWLNVHLLPHAAA--IVEVRTADGYGARWTADGAAFRGFLEPHAADGHATGWKH 156          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A3S4PZE1_9MAGN (ASCH domain-containing protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S4PZE1_9MAGN)

HSP 1 Score: 125 bits (313), Expect = 7.820e-30
Identity = 71/174 (40.80%), Postives = 91/174 (52.30%), Query Frame = 0
Query:   94 GVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            GV  +LGL  TAG++   LPP R  LL++   PH  KP V+  +                               L+ G RAL KH  R   GWWG+ GG++  KN  A  ++ HI+    W+NIH       D VLE+R A+GYGARWS DG  F GFLEP+ EDGHS+GW+H
Sbjct:  253 GVGSLLGLMHTAGTVPDALPPPRSALLSSFIVPH--KPNVKGST-------------------------------LTSGARALSKHVSRTSNGWWGSFGGSDSNKNVLALKVISHIITHCCWMNIHIVQP--HDCVLEIRVAEGYGARWSGDGSKFIGFLEPYMEDGHSKGWKH 391          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A2K1ZTS9_POPTR (ASCH domain-containing protein n=8 Tax=Populus TaxID=3689 RepID=A0A2K1ZTS9_POPTR)

HSP 1 Score: 123 bits (309), Expect = 2.840e-29
Identity = 72/181 (39.78%), Postives = 92/181 (50.83%), Query Frame = 0
Query:   87 LISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            L  +   GVR +LGL  T G++   LPP R TLL++                                 P   NI+ +    L+ G RAL KHA R R+ +WG  GG++  KN  A N++  I+A+  W NIH     G   V E+R A GYGARWS DG  F GFLEP+ EDGHSRGW+H
Sbjct:  244 LFGLSYGGVRSLLGLADTGGTVSNALPPPRSTLLSSF------------------------------IFPYNPNIKGSA---LTHGARALAKHAERSRDRYWGILGGSDSTKNRLAMNVISRIIASCCWSNIHVVPQHGA--VFEIRVADGYGARWSKDGTKFIGFLEPYIEDGHSRGWKH 389          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A1Y1HVJ8_KLENI (RNA-binding ASCH domain protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HVJ8_KLENI)

HSP 1 Score: 122 bits (307), Expect = 7.410e-29
Identity = 80/218 (36.70%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   53 ERFDRSSHPRSVHLRATTQHGPPLAKLLRRCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTA---LNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            E  +R++   ++H+    +   P+ +++      L  +GP  +  +L ++RTAGS+D  L PSR T+L A   LN+P                                +N       +L+VG RAL KHA R    WWG   G+E  KNE A  +VL IL  A W N H         V E R A+GYGARWS DG  FRGFLEP  E GH RGWRH
Sbjct:  237 EEQERAAGVVAIHVEPCPEDTQPVHRIMT----LLQELGPRPLFLLLRMRRTAGSIDDLLAPSRATMLAAFDALNDP--------------------------------KN-------RLTVGARALTKHAHRCSHNWWGVPTGSEQAKNEHARAVVLRILDGAVWQNAHLLPH--DVAVFEARVAEGYGARWSADGTQFRGFLEPQMEGGHQRGWRH 409          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: V3Z9A2_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V3Z9A2_LOTGI)

HSP 1 Score: 121 bits (303), Expect = 8.260e-29
Identity = 78/189 (41.27%), Postives = 94/189 (49.74%), Query Frame = 0
Query:   82 RCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREG--WWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDG-VLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            R    L+ +G  G+ D+LG+++T G+ +   PPSR+ LL +  E H  K                                     +L VG RAL KH  R  EG  WWG C GTE  KN  A  +V  IL  ATWINIH      QD  V+EVRQ +GYGARW+ DG  FRGFLEP   DGH  GWRH
Sbjct:  188 RIREILMLLGKRGIMDLLGIRKTVGTKE-MFPPSRQALLESFQEKHSAK------------------------------------SQLGVGARALAKHYHRD-EGMSWWGQCTGTEAAKNADALRIVNKILDGATWINIHWLP---QDVFVIEVRQEEGYGARWNADGSGFRGFLEPQMVDGHEIGWRH 335          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A9T753_PHYPA (Predicted protein (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T753_PHYPA)

HSP 1 Score: 119 bits (298), Expect = 1.220e-28
Identity = 75/207 (36.23%), Postives = 99/207 (47.83%), Query Frame = 0
Query:   64 VHLRATTQHGPPLAKLLRRCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTL---LTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            +H+    Q  P  A LL   ++   ++G  GVR +LG++ T G++   LPP +  L    +AL  P +                                      C++SVG RAL KHA R  +GWWG+  GTE  KN+ AE  +  ++  A WINIH         VLE+R A GYGARW  DG  FRGFLEP  E+GH   WRH
Sbjct:  111 IHVVRPAQRDP--ADLLSDILN---TLGIDGVRVLLGMRTTNGTLKEALPPPKSLLADSFSALQNPDIAG------------------------------------CRISVGARALAKHAPRSLDGWWGSISGTEAAKNKLAETTMHRLMKHAVWINIHL----APIPVLEIRVADGYGARWLADGSKFRGFLEPPMEEGHMVNWRH 272          
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Match: A0A2T7PZ21_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PZ21_POMCA)

HSP 1 Score: 116 bits (291), Expect = 1.130e-27
Identity = 75/187 (40.11%), Postives = 89/187 (47.59%), Query Frame = 0
Query:   82 RCIHFLISIGPAGVRDMLGLKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAHRRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGRE-GWWGACGGTEMEKNERAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFRGFLEPHREDGHSRGWRH 267
            R    L+ +   G+ D+LGL++T GS + + PPSR  L+ +  E H  K           +E W                         VG RAL KH  R     WWG C G+E EKN  A + V  IL  ATWINIH         +LEVRQ  GYGARW  DG  FRGFLEP  E GH  GWRH
Sbjct:  119 RVREILMLLCKRGILDLLGLRKTVGSKE-KFPPSRMRLMESFKEKHSVK-----------SELW-------------------------VGARALSKHYHRDHSTSWWGNCTGSEEEKNVYALDKVTKILNNATWINIHWLPHDVY--ILEVRQENGYGARWVADGSSFRGFLEPQMEGGHDVGWRH 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig71032.14766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJB4_ECTSI3.630e-9151.82Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3M6V321_POCDA3.470e-3141.01Uncharacterized protein n=1 Tax=Pocillopora damico... [more]
UPI000C04626F1.890e-3039.33uncharacterized protein LOC111339424 n=1 Tax=Stylo... [more]
A0A7S1C8E3_9STRA6.240e-3038.42Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A3S4PZE1_9MAGN7.820e-3040.80ASCH domain-containing protein n=1 Tax=Cinnamomum ... [more]
A0A2K1ZTS9_POPTR2.840e-2939.78ASCH domain-containing protein n=8 Tax=Populus Tax... [more]
A0A1Y1HVJ8_KLENI7.410e-2936.70RNA-binding ASCH domain protein n=1 Tax=Klebsormid... [more]
V3Z9A2_LOTGI8.260e-2941.27Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A9T753_PHYPA1.220e-2836.23Predicted protein (Fragment) n=1 Tax=Physcomitrium... [more]
A0A2T7PZ21_POMCA1.130e-2740.11Uncharacterized protein n=1 Tax=Pomacea canalicula... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34204:SF2RNA-BINDING ASCH DOMAIN PROTEINcoord: 165..267
coord: 86..129
NoneNo IPR availablePANTHERPTHR34204FAMILY NOT NAMEDcoord: 86..129
NoneNo IPR availablePANTHERPTHR34204FAMILY NOT NAMEDcoord: 165..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig71032contigH-elongata_contig71032:676..1479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig71032.14766.1mRNA_H-elongata_contig71032.14766.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig71032 528..2090 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig71032.14766.1 ID=prot_H-elongata_contig71032.14766.1|Name=mRNA_H-elongata_contig71032.14766.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=268bp
MLYGACKFCSDALPCYRFSTTTCRPELCVCNHGAVHHTALDLKSVMEEAN
GEERFDRSSHPRSVHLRATTQHGPPLAKLLRRCIHFLISIGPAGVRDMLG
LKRTAGSMDGRLPPSRRTLLTALNEPHLTKPMVQTKSPIKMAEWWAAEAH
RRRSIPSKRNIRTTVICKLSVGGRALCKHAIRGREGWWGACGGTEMEKNE
RAENMVLHILATATWINIHAFGGGGQDGVLEVRQAQGYGARWSVDGVVFR
GFLEPHREDGHSRGWRH*
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