prot_H-elongata_contig70950.14755.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70950.14755.1
Unique Nameprot_H-elongata_contig70950.14755.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length205
Homology
BLAST of mRNA_H-elongata_contig70950.14755.1 vs. uniprot
Match: D7G372_ECTSI (Sodium/hydrogen exchanger family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G372_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 3.970e-78
Identity = 141/216 (65.28%), Postives = 168/216 (77.78%), Query Frame = 0
Query:    1 SGVKIREHAIHAGAVFGMTDAMLGLPYRATYTTTSFVHLFFFDKKAFLKESMQSEDLNRALWRAVGVSVLRKFYGFHKLRLQELQKMVQNAEFIDLVQEGMGIATTQIEYKVEEIRAKAAFRVD-NHGGQQLSSRNXXXXXXXXXXXXX---------GRIHVNKLKSQDRGGSLAKTLSNMGLYNMD--KITDETLAEAATVLTPHSSSAQTLKV 204
            S VKI+EH +HAGAVFGMTD+MLGLP+RATYT+TSFVHLFFFD+ +FL E++ +EDLNR+LWR VGVSVLRKFYGFH LRLQELQKMVQNAEF+D++QEG+G+ TTQ EYKVE +RAKAA R   +H    LS  N                      GRIH+++LK  +RGG +AKTLSNMGLYNMD  ++TDE+LAEAAT+LTPHSSS QTLKV
Sbjct: 1141 SSVKIKEHPLHAGAVFGMTDSMLGLPFRATYTSTSFVHLFFFDRTSFLFEALANEDLNRSLWRTVGVSVLRKFYGFHCLRLQELQKMVQNAEFVDVMQEGVGVVTTQNEYKVEALRAKAASRAGLSHSNSSLSELNSAAEGAAPEVFNSAFQDSTDDDGRIHIHQLKENERGG-IAKTLSNMGLYNMDMDRMTDESLAEAATLLTPHSSSNQTLKV 1355          
BLAST of mRNA_H-elongata_contig70950.14755.1 vs. uniprot
Match: A0A835Z8G2_9STRA (Sodium/hydrogen exchanger family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G2_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.660e-39
Identity = 82/178 (46.07%), Postives = 113/178 (63.48%), Query Frame = 0
Query:    6 REHAIHAGAVFGMTDAMLGLPYRATYTTTSFVHLFFFDKKAFLKESMQSEDLNRALWRAVGVSVLRKFYGFHKLRLQELQKMVQNAEFIDLVQEGMGIATTQIEYKVEEIRAK--AAFRVDN--HGGQQLSSRNXXXXXXXXXXXXX-GRIHVNKLKSQDRGGSLAKTLSNMGLYNMD 178
            R+  +HAGAVFGMTD MLG P+R  YTT SFVH+F+FDK   L E+ + +DLNR+LWR VGV+VLRKF GF+++RL EL K+V ++EF+DL + G+G  T+++  +VE+IRA+  A+  V    HG    S+ +              G IH+ K+     G SL + L  MGLY  D
Sbjct: 1172 RQQVLHAGAVFGMTDQMLGRPFRGAYTTASFVHVFYFDKDRLLAEAARCDDLNRSLWRTVGVTVLRKFVGFNRMRLNELHKLVYSSEFVDLSRAGVGEETSEVALRVEQIRARMTASSSVGGMRHGSISGSTGDAGTPTSAAAAAADDGAIHIKKMSRDPSGTSLKQALRQMGLYEGD 1349          
BLAST of mRNA_H-elongata_contig70950.14755.1 vs. uniprot
Match: D7FHU8_ECTSI (Cyclic nucleotide-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU8_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 3.200e-5
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0
Query:    6 REHAIHAGAVFGMTDAMLGLPYRATYTTTSFVHLFFFDK 44
            +E  ++AG V G+ + ++ +PYR TYTT SFVHLFFFDK
Sbjct:  210 KERLVNAGTVVGLDEQLMQVPYRCTYTTASFVHLFFFDK 248          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70950.14755.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G372_ECTSI3.970e-7865.28Sodium/hydrogen exchanger family n=1 Tax=Ectocarpu... [more]
A0A835Z8G2_9STRA2.660e-3946.07Sodium/hydrogen exchanger family n=1 Tax=Tribonema... [more]
D7FHU8_ECTSI3.200e-556.41Cyclic nucleotide-binding protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 10..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70950contigH-elongata_contig70950:286..3043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70950.14755.1mRNA_H-elongata_contig70950.14755.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70950 286..3043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70950.14755.1 ID=prot_H-elongata_contig70950.14755.1|Name=mRNA_H-elongata_contig70950.14755.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=205bp
SGVKIREHAIHAGAVFGMTDAMLGLPYRATYTTTSFVHLFFFDKKAFLKE
SMQSEDLNRALWRAVGVSVLRKFYGFHKLRLQELQKMVQNAEFIDLVQEG
MGIATTQIEYKVEEIRAKAAFRVDNHGGQQLSSRNRAAAGGSDNDDDDGR
IHVNKLKSQDRGGSLAKTLSNMGLYNMDKITDETLAEAATVLTPHSSSAQ
TLKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like