prot_H-elongata_contig70949.14754.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig70949.14754.1
Unique Name	prot_H-elongata_contig70949.14754.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	105

Homology

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: D8LIP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP0_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 7.770e-51
Identity = 87/96 (90.62%), Postives = 94/96 (97.92%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSSR 96
            MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDD+TGDGTT++VLFTGELLRQAERYL+EGLHPRVLTEGFELAKEH L+LL+ FRS+R
Sbjct:   47 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDVTGDGTTTSVLFTGELLRQAERYLTEGLHPRVLTEGFELAKEHALELLDTFRSTR 142

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A418EL66_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EL66_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.490e-45
Identity = 74/90 (82.22%), Postives = 85/90 (94.44%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLE 90
            MLVGGAGQIKLTKDG VLLHEMQIQHPTA +IAR+ATAQDDITGDGTTS+VLFTGELL+QAER+LS+GLHPR+L EGFELA+E  L++L+
Sbjct:   46 MLVGGAGQIKLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSSVLFTGELLKQAERFLSDGLHPRILAEGFELAREEALRVLD 135

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7R9YWJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YWJ8_9STRA)

HSP 1 Score: 151 bits (381), Expect = 7.700e-45
Identity = 72/93 (77.42%), Postives = 84/93 (90.32%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 93
            MLVGGAGQIKLTKDG VLLHEMQIQHPTA MIAR+ATAQDD+TGDGTTS VL  GELLRQAERY +EGLHPRV+T+G+++A++ TLK L+ F+
Sbjct:   26 MLVGGAGQIKLTKDGNVLLHEMQIQHPTATMIARTATAQDDVTGDGTTSTVLLCGELLRQAERYAAEGLHPRVITDGYDVARDATLKFLDEFK 118

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7S2MSB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSB4_9STRA)

HSP 1 Score: 159 bits (402), Expect = 4.090e-44
Identity = 77/95 (81.05%), Postives = 87/95 (91.58%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSS 95
            MLVGGAGQIK+TKDG VLLHEMQIQHPTAM+IAR+ATAQDDITGDGTTSAVL  GELLRQAER  +EGLHPRV+TEGFE+AK+HTL  LE+F+ +
Sbjct:   54 MLVGGAGQIKITKDGNVLLHEMQIQHPTAMLIARNATAQDDITGDGTTSAVLLCGELLRQAERVYAEGLHPRVITEGFEMAKDHTLDFLESFKKT 148

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7S3GSF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSF3_9STRA)

HSP 1 Score: 152 bits (384), Expect = 4.240e-43
Identity = 73/93 (78.49%), Postives = 84/93 (90.32%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 93
            MLVGGAGQIK+TKDG VLLHEMQIQHPTAMMIAR+ATA DD  GDGTTS+VLFTGELL+QAERY SEGLHPR++TEG+E+AK+  L+ LE F+
Sbjct:   59 MLVGGAGQIKITKDGNVLLHEMQIQHPTAMMIARAATAMDDQVGDGTTSSVLFTGELLKQAERYTSEGLHPRLITEGYEIAKDMVLEFLEGFK 151

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7S2V196_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V196_9STRA)

HSP 1 Score: 156 bits (394), Expect = 5.490e-43
Identity = 76/93 (81.72%), Postives = 86/93 (92.47%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 93
            MLVGGAGQIKLTKDGRVLLHEMQIQHPTA++IAR+ATAQDDITGDGTTS+VL TGELL+QAERYL+EGLHPR LTEGF+LA++  L  LE F+
Sbjct:   47 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAVLIARTATAQDDITGDGTTSSVLLTGELLKQAERYLAEGLHPRSLTEGFDLARDRVLDFLEKFK 139

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A5A8DW94_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DW94_CAFRO)

HSP 1 Score: 154 bits (388), Expect = 3.630e-42
Identity = 77/101 (76.24%), Postives = 87/101 (86.14%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSSRRVHAA 101
            MLVGGAGQIKLTKDG VLLHEMQIQHPTA+MIAR+ATAQDD TGDGTTS VLFTGELLRQAER+ SEG+HPR+L EGFE A+ + LK L+ F++S    AA
Sbjct:   46 MLVGGAGQIKLTKDGNVLLHEMQIQHPTAIMIARTATAQDDSTGDGTTSIVLFTGELLRQAERFTSEGVHPRILAEGFETARVNALKFLDEFKTSASAIAA 146

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A485LAF2_9STRA (Aste57867_17113 protein n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LAF2_9STRA)

HSP 1 Score: 154 bits (388), Expect = 3.980e-42
Identity = 74/93 (79.57%), Postives = 85/93 (91.40%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 93
            MLVGGAGQIKLTKDG VLLHEMQIQHPTA +IAR+ATAQDDITGDGTTS VLFTGELL+QAER+LS+GLHPR+L EGFELA+E  L++L+  +
Sbjct:   46 MLVGGAGQIKLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSTVLFTGELLKQAERFLSDGLHPRILAEGFELAREEALRVLDRIK 138

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: K3WHV4_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3WHV4_GLOUD)

HSP 1 Score: 153 bits (387), Expect = 4.500e-42
Identity = 73/93 (78.49%), Postives = 85/93 (91.40%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 93
            MLVGGAGQIKLTKDG VLLHEMQIQHPTA +IAR+ATAQDDITGDGTTS VLF GELL+QAER+L++GLHPR+L EGF+LAK+ TL++LE  +
Sbjct:   45 MLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARAATAQDDITGDGTTSTVLFIGELLKQAERFLADGLHPRILAEGFDLAKDETLRILETLK 137

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BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A0L0SC99_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SC99_ALLM3)

HSP 1 Score: 149 bits (376), Expect = 5.040e-42
Identity = 73/98 (74.49%), Postives = 89/98 (90.82%), Query Frame = 0

Query:    1 MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSSRRV 98
            MLV G+GQIKLTKDG+VLL EMQIQ+PTA MIAR+ATAQD+ITGDGTTS VL  GELL+QAERY+SEGLHPRVLTEGFELAK+ +L+ LE+F+ ++++
Sbjct:   55 MLVDGSGQIKLTKDGKVLLSEMQIQNPTATMIARAATAQDEITGDGTTSIVLLVGELLKQAERYISEGLHPRVLTEGFELAKKESLQFLESFKLTKKI 152

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot

BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIP0_ECTSI	7.770e-51	90.63	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A418EL66_9STRA	5.490e-45	82.22	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A7R9YWJ8_9STRA	7.700e-45	77.42	Hypothetical protein (Fragment) n=1 Tax=Pseudictyo...	[more]
A0A7S2MSB4_9STRA	4.090e-44	81.05	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S3GSF3_9STRA	4.240e-43	78.49	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7S2V196_9STRA	5.490e-43	81.72	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A5A8DW94_CAFRO	3.630e-42	76.24	Uncharacterized protein n=3 Tax=Cafeteria roenberg...	[more]
A0A485LAF2_9STRA	3.980e-42	79.57	Aste57867_17113 protein n=17 Tax=Saprolegniaceae T...	[more]
K3WHV4_GLOUD	4.500e-42	78.49	Uncharacterized protein n=4 Tax=Oomycota TaxID=476...	[more]
A0A0L0SC99_ALLM3	5.040e-42	74.49	Uncharacterized protein n=1 Tax=Allomyces macrogyn...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 39..58 score: 45.48 coord: 9..27 score: 31.63
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 1..92 e-value: 6.4E-33 score: 114.1
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 1..102 e-value: 3.9E-34 score: 120.0
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 1..98
None	No IPR available	PANTHER	PTHR11353:SF21	T-COMPLEX PROTEIN 1 SUBUNIT ZETA	coord: 1..95
None	No IPR available	PANTHER	PTHR11353	CHAPERONIN	coord: 1..95
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00995	TCP1_3	coord: 39..47

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig70949	contig	H-elongata_contig70949:688..2822 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig70949.14754.1	mRNA_H-elongata_contig70949.14754.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig70949 688..2843 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig70949.14754.1 ID=prot_H-elongata_contig70949.14754.1|Name=mRNA_H-elongata_contig70949.14754.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSA
VLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSSRRVHA
ARVD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR002423	Cpn60/TCP-1
IPR027413	GROEL-like_equatorial_sf
IPR002194	Chaperonin_TCP-1_CS