mRNA_H-elongata_contig70949.14754.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: D8LIP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP0_ECTSI) HSP 1 Score: 191 bits (484), Expect = 5.440e-56 Identity = 94/103 (91.26%), Postives = 101/103 (98.06%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSSR 309
GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDD+TGDGTT++VLFTGELLRQAERYL+EGLHPRVLTEGFELAKEH L+LL+ FRS+R
Sbjct: 40 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDVTGDGTTTSVLFTGELLRQAERYLTEGLHPRVLTEGFELAKEHALELLDTFRSTR 142
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A418EL66_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418EL66_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.570e-50 Identity = 81/97 (83.51%), Postives = 92/97 (94.85%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLE 291
GPRGTLKMLVGGAGQIKLTKDG VLLHEMQIQHPTA +IAR+ATAQDDITGDGTTS+VLFTGELL+QAER+LS+GLHPR+L EGFELA+E L++L+
Sbjct: 39 GPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSSVLFTGELLKQAERFLSDGLHPRILAEGFELAREEALRVLD 135
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7R9YWJ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9YWJ8_9STRA) HSP 1 Score: 165 bits (417), Expect = 3.410e-50 Identity = 79/100 (79.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 300
GPRGTLKMLVGGAGQIKLTKDG VLLHEMQIQHPTA MIAR+ATAQDD+TGDGTTS VL GELLRQAERY +EGLHPRV+T+G+++A++ TLK L+ F+
Sbjct: 19 GPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTATMIARTATAQDDVTGDGTTSTVLLCGELLRQAERYAAEGLHPRVITDGYDVARDATLKFLDEFK 118
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7S2MSB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSB4_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.220e-49 Identity = 84/102 (82.35%), Postives = 94/102 (92.16%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSS 306
GPRGTLKMLVGGAGQIK+TKDG VLLHEMQIQHPTAM+IAR+ATAQDDITGDGTTSAVL GELLRQAER +EGLHPRV+TEGFE+AK+HTL LE+F+ +
Sbjct: 47 GPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTAMLIARNATAQDDITGDGTTSAVLLCGELLRQAERVYAEGLHPRVITEGFEMAKDHTLDFLESFKKT 148
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7S3GSF3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GSF3_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.320e-48 Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 300
GPRGTLKMLVGGAGQIK+TKDG VLLHEMQIQHPTAMMIAR+ATA DD GDGTTS+VLFTGELL+QAERY SEGLHPR++TEG+E+AK+ L+ LE F+
Sbjct: 52 GPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTAMMIARAATAMDDQVGDGTTSSVLFTGELLKQAERYTSEGLHPRLITEGYEIAKDMVLEFLEGFK 151
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A7S2V196_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V196_9STRA) HSP 1 Score: 170 bits (430), Expect = 4.370e-48 Identity = 83/100 (83.00%), Postives = 93/100 (93.00%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 300
GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTA++IAR+ATAQDDITGDGTTS+VL TGELL+QAERYL+EGLHPR LTEGF+LA++ L LE F+
Sbjct: 40 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAVLIARTATAQDDITGDGTTSSVLLTGELLKQAERYLAEGLHPRSLTEGFDLARDRVLDFLEKFK 139
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A485LAF2_9STRA (Aste57867_17113 protein n=17 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LAF2_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.210e-47 Identity = 81/100 (81.00%), Postives = 92/100 (92.00%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 300
GPRGTLKMLVGGAGQIKLTKDG VLLHEMQIQHPTA +IAR+ATAQDDITGDGTTS VLFTGELL+QAER+LS+GLHPR+L EGFELA+E L++L+ +
Sbjct: 39 GPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSTVLFTGELLKQAERFLSDGLHPRILAEGFELAREEALRVLDRIK 138
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: K3WHV4_GLOUD (Uncharacterized protein n=4 Tax=Oomycota TaxID=4762 RepID=K3WHV4_GLOUD) HSP 1 Score: 167 bits (423), Expect = 3.510e-47 Identity = 80/100 (80.00%), Postives = 92/100 (92.00%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 300
GPRGTLKMLVGGAGQIKLTKDG VLLHEMQIQHPTA +IAR+ATAQDDITGDGTTS VLF GELL+QAER+L++GLHPR+L EGF+LAK+ TL++LE +
Sbjct: 38 GPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARAATAQDDITGDGTTSTVLFIGELLKQAERFLADGLHPRILAEGFDLAKDETLRILETLK 137
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A6V1PFD7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PFD7_HETAK) HSP 1 Score: 167 bits (423), Expect = 4.360e-47 Identity = 79/100 (79.00%), Postives = 92/100 (92.00%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFR 300
GPRGTLKMLVGGAGQIKLTKDG+VLLHEMQIQHPTAM+I R+ATAQDDITGDGTTS ++F GELL+QAER+LSEGLHPRV+TEGF+LA++ L L+ F+
Sbjct: 39 GPRGTLKMLVGGAGQIKLTKDGKVLLHEMQIQHPTAMLIGRTATAQDDITGDGTTSVIIFCGELLKQAERHLSEGLHPRVITEGFDLARDRVLTFLDGFK 138
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Match: A0A0L0SC99_ALLM3 (Uncharacterized protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SC99_ALLM3) HSP 1 Score: 162 bits (410), Expect = 5.440e-47 Identity = 79/105 (75.24%), Postives = 96/105 (91.43%), Query Frame = 1
Query: 1 GPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAVLFTGELLRQAERYLSEGLHPRVLTEGFELAKEHTLKLLEAFRSSRRV 315
GPRGT+KMLV G+GQIKLTKDG+VLL EMQIQ+PTA MIAR+ATAQD+ITGDGTTS VL GELL+QAERY+SEGLHPRVLTEGFELAK+ +L+ LE+F+ ++++
Sbjct: 48 GPRGTIKMLVDGSGQIKLTKDGKVLLSEMQIQNPTATMIARAATAQDEITGDGTTSIVLLVGELLKQAERYISEGLHPRVLTEGFELAKKESLQFLESFKLTKKI 152 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70949.14754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig70949.14754.1 >prot_H-elongata_contig70949.14754.1 ID=prot_H-elongata_contig70949.14754.1|Name=mRNA_H-elongata_contig70949.14754.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp MLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDITGDGTTSAback to top mRNA from alignment at H-elongata_contig70949:688..2843- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig70949.14754.1 ID=mRNA_H-elongata_contig70949.14754.1|Name=mRNA_H-elongata_contig70949.14754.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2156bp|location=Sequence derived from alignment at H-elongata_contig70949:688..2843- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig70949:688..2843- >mRNA_H-elongata_contig70949.14754.1 ID=mRNA_H-elongata_contig70949.14754.1|Name=mRNA_H-elongata_contig70949.14754.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=630bp|location=Sequence derived from alignment at H-elongata_contig70949:688..2843- (Himanthalia elongata Himel1 dioecious)back to top |