prot_H-elongata_contig70947.14753.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70947.14753.1
Unique Nameprot_H-elongata_contig70947.14753.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length226
Homology
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BLAST of mRNA_H-elongata_contig70947.14753.1 vs. uniprot
Match: D7FK93_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK93_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 3.420e-63
Identity = 113/223 (50.67%), Postives = 141/223 (63.23%), Query Frame = 0 
Query:    1 TAPVPAGAIDGVWRLCFCEGDFLQGIEVDMHGYLGRKQQVDVLIDCGAERIALGSSGLSSSLPKVVHGSLAYVPGTQTIIGTFDEEAAGIESLVLHAFLMDQDALGFHTMFHGKEGFLLFHAERSKRAMGRLSKPPGKRPGEASEAPGASTAAVAGEAKAKASPVLRLPVNPDLKLVGNEDTHKDRRLAVEETGRETGSFNTFMRYLETEVPTLYVVLVGPAL 223
            +AP+P   ++G+WRLCFCEGDFL GI+VD HGY+ R Q V++L D   E+I L SSGL SSLP  + G L+Y P TQT+ GTF+E   GIESL L AF++D DALGFHT+   K G LLFHAE+SK A  RLSK                            +    L +  D++L   ED H+D+RLAV+ETGRETGSFNTF+RYLE E   +Y V+ GP L
Sbjct:  122 SAPLPLQTMEGLWRLCFCEGDFLPGIDVDKHGYVARGQNVEILFDPEGEKITLASSGLGSSLPAAMEGGLSYTPETQTVTGTFEE--TGIESLDLRAFMIDDDALGFHTVSEDKHGILLFHAEKSKAAAARLSKAVXXXXXXXXXXXXXXXXXXXXXXXXXVAGKDLLDLVLDVQLASEEDVHEDKRLAVQETGRETGSFNTFIRYLEKEGGMIYAVVAGPIL 342
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70947.14753.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK93_ECTSI3.420e-6350.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70947contigH-elongata_contig70947:197..2648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70947.14753.1mRNA_H-elongata_contig70947.14753.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70947 197..2648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70947.14753.1 ID=prot_H-elongata_contig70947.14753.1|Name=mRNA_H-elongata_contig70947.14753.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=226bp
TAPVPAGAIDGVWRLCFCEGDFLQGIEVDMHGYLGRKQQVDVLIDCGAER
IALGSSGLSSSLPKVVHGSLAYVPGTQTIIGTFDEEAAGIESLVLHAFLM
DQDALGFHTMFHGKEGFLLFHAERSKRAMGRLSKPPGKRPGEASEAPGAS
TAAVAGEAKAKASPVLRLPVNPDLKLVGNEDTHKDRRLAVEETGRETGSF
NTFMRYLETEVPTLYVVLVGPALLR*
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