prot_H-elongata_contig70674.14731.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70674.14731.1
Unique Nameprot_H-elongata_contig70674.14731.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length101
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70674.14731.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 7..91
e-value: 3.3E-7
score: 31.8
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 12..74
e-value: 1.7E-6
score: 27.7
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..75
score: 10.811
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 11..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70674contigH-elongata_contig70674:170..2305 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70674.14731.1mRNA_H-elongata_contig70674.14731.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70674 170..2305 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70674.14731.1 ID=prot_H-elongata_contig70674.14731.1|Name=mRNA_H-elongata_contig70674.14731.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=101bp
TRQQHHGQLGNGQCLNMMVQAGATVAQLREYIDSTAGFKVTAGPLKRLLY
RGMNLHDDQRLNECGIPTESQLLLIDAEENRFKDGKIKLPGESKPEIKPR
D
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf