prot_H-elongata_contig70663.14730.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig70663.14730.1
Unique Name	prot_H-elongata_contig70663.14730.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	140

Homology

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: D7FYI4_ECTSI (S5 DRBM domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7FYI4_ECTSI)

HSP 1 Score: 274 bits (700), Expect = 5.510e-91
Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAKNPAPKTDEF 139
            +VATAIRGAIIIAKMSVVPVRRGYWGR+NG PHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELW+PTVFQSAPYQEHTDFLAKNPAPK  EF
Sbjct:  143 EVATAIRGAIIIAKMSVVPVRRGYWGRRNGMPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWKPTVFQSAPYQEHTDFLAKNPAPKAAEF 281

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: A0A835Z6C9_9STRA (40S ribosomal protein S2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6C9_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.640e-74
Identity = 110/131 (83.97%), Postives = 121/131 (92.37%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAKN 131
            +VATAIRGAI IAKMSVVP+RRGYWGR+NG PHTVP KVTGKCGSVRVRLIPAPRGTGLVA+PV +KLL MAGVEDCYT S GHTRT+GNFVKAV+FAL KTYGYLSPELW PT F+++PYQEHTDFLAK+
Sbjct:  119 EVATAIRGAITIAKMSVVPIRRGYWGRRNGQPHTVPCKVTGKCGSVRVRLIPAPRGTGLVASPVSRKLLGMAGVEDCYTCSNGHTRTMGNFVKAVFFALGKTYGYLSPELWAPTQFKASPYQEHTDFLAKS 249

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: A0A7S4UVA6_9DINO (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S4UVA6_9DINO)

HSP 1 Score: 221 bits (563), Expect = 3.070e-70
Identity = 105/130 (80.77%), Postives = 118/130 (90.77%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAK 130
            +VATAIRGAII+AK+SVVP+RRGYWG+K G PHTV NKVTGKCGSV VRLIPAPRGTGLVA+PVPKKLL MAGVED Y+ S GHTRT+GNF+KAVY AL+KTYGYLSPELW+PTVF   PYQE+TDFL+K
Sbjct:  131 EVATAIRGAIILAKISVVPIRRGYWGKKVGLPHTVANKVTGKCGSVSVRLIPAPRGTGLVASPVPKKLLGMAGVEDVYSQSTGHTRTMGNFIKAVYTALSKTYGYLSPELWKPTVFTPTPYQEYTDFLSK 260

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: A0A0W8CI70_PHYNI (40S ribosomal protein S2 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8CI70_PHYNI)

HSP 1 Score: 217 bits (553), Expect = 3.400e-70
Identity = 104/135 (77.04%), Postives = 116/135 (85.93%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAKNPAPK 135
            +VATAIRGAII+AK+S+VPVRRGYWGR  G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+E CYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LW+   F  +PYQEHTDFLAK    K
Sbjct:   37 EVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEXCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWEQHTFGPSPYQEHTDFLAKTAIKK 171

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: A0A484DZT2_BRELC (S5 DRBM domain-containing protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=A0A484DZT2_BRELC)

HSP 1 Score: 218 bits (555), Expect = 3.050e-69
Identity = 104/135 (77.04%), Postives = 117/135 (86.67%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAKNPAPK 135
            +VATAIRGAII+AK+S+VPVRRGYWGR  G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LW+   F  +PYQE+TDFLAK    K
Sbjct:  127 EVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWEQHTFGQSPYQEYTDFLAKTAIKK 261

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: E9HJ37_DAPPU (40S ribosomal protein S2 n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9HJ37_DAPPU)

HSP 1 Score: 212 bits (539), Expect = 3.780e-68
Identity = 101/134 (75.37%), Postives = 115/134 (85.82%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAKNPAP 134
            +VATAIRGAII+AK+SVVPVRRGYWG K G PHTVP KVTGKCGSV VRLIP PRGTG+V+APVPKKLL MAG+EDCYT++RG T TLGNF KA Y A+AKTY YL+P+LW  TVF S+PYQEH+D+L KN  P
Sbjct:   21 EVATAIRGAIIMAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPGPRGTGIVSAPVPKKLLQMAGIEDCYTAARGSTGTLGNFAKATYAAIAKTYAYLTPDLWTETVFNSSPYQEHSDYLMKNHRP 154

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: A0A7S2KQT1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KQT1_9STRA)

HSP 1 Score: 212 bits (540), Expect = 4.640e-68
Identity = 99/130 (76.15%), Postives = 117/130 (90.00%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAK 130
            +VATAIRGAI IAK++VVPVRRGYWGR +GFPHT+P KVTGKCGSVRVRLIPAPRGTGLV++PV KKLL+MAG+ D Y+SSRGHTRT+GNF+KA+Y AL+KTYGYL+P+LW      S+P+QEHTDFLAK
Sbjct:   49 EVATAIRGAITIAKLNVVPVRRGYWGRMSGFPHTIPTKVTGKCGSVRVRLIPAPRGTGLVSSPVGKKLLTMAGIRDVYSSSRGHTRTMGNFIKALYQALSKTYGYLTPDLWAERALGSSPFQEHTDFLAK 178

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: M4BLS4_HYAAE (S5 DRBM domain-containing protein n=19 Tax=Oomycota TaxID=4762 RepID=M4BLS4_HYAAE)

HSP 1 Score: 216 bits (550), Expect = 8.970e-68
Identity = 103/135 (76.30%), Postives = 116/135 (85.93%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAKNPAPK 135
            +VATAIRGAII+AK+S+VPVRRGYWGR  G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAPVPKKLL MAG+EDCYTS+RGHTRT+GNFVKA ++AL  TY YL+P+LW+   F  +PYQ HTDFLAK    K
Sbjct:  181 EVATAIRGAIILAKISLVPVRRGYWGRMVGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPVPKKLLGMAGIEDCYTSARGHTRTMGNFVKATFYALRATYAYLTPDLWEQHSFVPSPYQAHTDFLAKTAIKK 315

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: K3X0V8_GLOUD (S5 DRBM domain-containing protein n=5 Tax=Oomycota TaxID=4762 RepID=K3X0V8_GLOUD)

HSP 1 Score: 214 bits (544), Expect = 1.340e-67
Identity = 101/135 (74.81%), Postives = 116/135 (85.93%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAKNPAPK 135
            +VAT+IRGAII+AK+++VPVRRGYWG   G PHTVPNKVTGKCGSVRVRLIPAPRGTGL AAP PKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LW+   F ++PYQEHTDFLAK    K
Sbjct:  125 EVATSIRGAIILAKIALVPVRRGYWGLMIGAPHTVPNKVTGKCGSVRVRLIPAPRGTGLCAAPAPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWEQHSFAASPYQEHTDFLAKTTIKK 259

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BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Match: A0A024U0H5_9STRA (40S ribosomal protein S2 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U0H5_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.470e-67
Identity = 100/130 (76.92%), Postives = 114/130 (87.69%), Query Frame = 0

Query:    1 KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRLIPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALAKTYGYLSPELWQPTVFQSAPYQEHTDFLAK 130
            +VATAIRGAII AKM++VPVRRGYWG+ +G PHTV NKVTGKCGSVRVRLIPAPRGTGL AAP PKKLL MAG+EDCYTS+RGHTRTLGNFVKA ++AL  TY YL+P+LW PT F   PYQEH+D+L+K
Sbjct:  128 EVATAIRGAIINAKMNLVPVRRGYWGKMSGLPHTVCNKVTGKCGSVRVRLIPAPRGTGLCAAPAPKKLLGMAGIEDCYTSARGHTRTLGNFVKATFYALRATYAYLTPDLWTPTKFTPTPYQEHSDYLSK 257

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot

BLAST of mRNA_H-elongata_contig70663.14730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FYI4_ECTSI	5.510e-91	95.68	S5 DRBM domain-containing protein n=3 Tax=Eukaryot...	[more]
A0A835Z6C9_9STRA	1.640e-74	83.97	40S ribosomal protein S2 n=1 Tax=Tribonema minus T...	[more]
A0A7S4UVA6_9DINO	3.070e-70	80.77	Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep...	[more]
A0A0W8CI70_PHYNI	3.400e-70	77.04	40S ribosomal protein S2 n=1 Tax=Phytophthora nico...	[more]
A0A484DZT2_BRELC	3.050e-69	77.04	S5 DRBM domain-containing protein n=7 Tax=Peronosp...	[more]
E9HJ37_DAPPU	3.780e-68	75.37	40S ribosomal protein S2 n=1 Tax=Daphnia pulex Tax...	[more]
A0A7S2KQT1_9STRA	4.640e-68	76.15	Hypothetical protein n=1 Tax=Leptocylindrus danicu...	[more]
M4BLS4_HYAAE	8.970e-68	76.30	S5 DRBM domain-containing protein n=19 Tax=Oomycot...	[more]
K3X0V8_GLOUD	1.340e-67	74.81	S5 DRBM domain-containing protein n=5 Tax=Oomycota...	[more]
A0A024U0H5_9STRA	1.470e-67	76.92	40S ribosomal protein S2 n=3 Tax=Aphanomyces TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 40..106 e-value: 9.9E-26 score: 89.0
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 20..112 e-value: 2.7E-47 score: 161.1
None	No IPR available	PANTHER	PTHR13718:SF85		coord: 2..131
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 2..131
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 33..112

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig70663	contig	H-elongata_contig70663:150..2253 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig70663.14730.1	mRNA_H-elongata_contig70663.14730.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig70663 150..2253 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig70663.14730.1 ID=prot_H-elongata_contig70663.14730.1|Name=mRNA_H-elongata_contig70663.14730.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=140bp
KVATAIRGAIIIAKMSVVPVRRGYWGRKNGFPHTVPNKVTGKCGSVRVRL
IPAPRGTGLVAAPVPKKLLSMAGVEDCYTSSRGHTRTLGNFVKAVYFALA
KTYGYLSPELWQPTVFQSAPYQEHTDFLAKNPAPKTDEF*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005324	Ribosomal_S5_C
IPR014721	Ribosomal_S5_D2-typ_fold_subgr
IPR000851	Ribosomal_S5
IPR020568	Ribosomal_S5_D2-typ_fold