prot_H-elongata_contig70631.14725.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig70631.14725.1
Unique Name	prot_H-elongata_contig70631.14725.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	72

Homology

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BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: D0NME6_PHYIT (Caltractin n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NME6_PHYIT)

HSP 1 Score: 127 bits (318), Expect = 1.700e-36
Identity = 66/71 (92.96%), Postives = 66/71 (92.96%), Query Frame = 0

Query:    2 ARRTPAKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            ARR   KR AKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMI DIDK
Sbjct:    2 ARRISQKRNAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMIGDIDK 72

[Close]

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A662XQ59_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XQ59_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.550e-35
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0

Query:    2 ARRTPAKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            ARR   KR AKTYERPGLSEEE+EEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMI DIDK
Sbjct:    2 ARRISQKRNAKTYERPGLSEEEVEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMIGDIDK 72

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BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A836CPT7_9STRA (Calcium-dependent protein 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPT7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 9.660e-35
Identity = 64/72 (88.89%), Postives = 66/72 (91.67%), Query Frame = 0

Query:    1 QARRTPAKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            Q R    KR AKTYERPGLSEEEIEEIREAFNLFDTDGSG+IDPKELKAAMQSLGFEAKNQTIYQMI+DIDK
Sbjct:    7 QRRAPQGKRAAKTYERPGLSEEEIEEIREAFNLFDTDGSGSIDPKELKAAMQSLGFEAKNQTIYQMIADIDK 78

[Close]

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A7S2UVW5_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2UVW5_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.420e-34
Identity = 65/69 (94.20%), Postives = 66/69 (95.65%), Query Frame = 0

Query:    3 RRTPAKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDID 71
            RRTP +R  KTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDID
Sbjct:    2 RRTP-QRNKKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDID 69

[Close]

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A7S3K4A4_9STRA (Hypothetical protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S3K4A4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 1.410e-33
Identity = 62/65 (95.38%), Postives = 63/65 (96.92%), Query Frame = 0

Query:    8 KRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            KR  KTYERPGLSE+EIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK
Sbjct:   10 KRPYKTYERPGLSEDEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 74

[Close]

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A485KUJ5_9STRA (Aste57867_11335 protein n=36 Tax=Stramenopiles TaxID=33634 RepID=A0A485KUJ5_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.000e-33
Identity = 61/64 (95.31%), Postives = 62/64 (96.88%), Query Frame = 0

Query:    8 KRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDID 71
            KR +KTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMI DID
Sbjct:   10 KRASKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMIGDID 73

[Close]

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A662XJ11_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XJ11_9STRA)

HSP 1 Score: 127 bits (318), Expect = 1.000e-32
Identity = 66/71 (92.96%), Postives = 66/71 (92.96%), Query Frame = 0

Query:    2 ARRTPAKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            ARR   KR AKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMI DIDK
Sbjct:  310 ARRISQKRNAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMIGDIDK 380

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BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A1V9YV47_9STRA (Target of rapamycin complex subunit LST8 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YV47_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.040e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0

Query:    7 AKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            AKR AKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMI DIDK
Sbjct:   11 AKRGAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMIGDIDK 76

[Close]

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A7S1TRX6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRX6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 3.640e-32
Identity = 58/59 (98.31%), Postives = 59/59 (100.00%), Query Frame = 0

Query:   14 YERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            YERPGLSEEEIEEIREAFNLFDTDGSGTIDP+ELKAAMQSLGFEAKNQTIYQMISDIDK
Sbjct:   27 YERPGLSEEEIEEIREAFNLFDTDGSGTIDPRELKAAMQSLGFEAKNQTIYQMISDIDK 85

[Close]

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Match: A0A5A8CTE5_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CTE5_CAFRO)

HSP 1 Score: 115 bits (288), Expect = 3.560e-31
Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0

Query:    2 ARRTPAKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAAMQSLGFEAKNQTIYQMISDIDK 72
            ARR+P  R  + Y+RPGLSEEEIEEIREAFNLFDTDGSGTIDPKELK+AMQSLGFEAKN TIYQMI DIDK
Sbjct:    4 ARRSP--RRGRAYDRPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKSAMQSLGFEAKNATIYQMIGDIDK 72

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot

BLAST of mRNA_H-elongata_contig70631.14725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D0NME6_PHYIT	1.700e-36	92.96	Caltractin n=1 Tax=Phytophthora infestans (strain ...	[more]
A0A662XQ59_9STRA	1.550e-35	91.55	Uncharacterized protein n=3 Tax=Peronosporaceae Ta...	[more]
A0A836CPT7_9STRA	9.660e-35	88.89	Calcium-dependent protein 4 n=1 Tax=Tribonema minu...	[more]
A0A7S2UVW5_9STRA	4.420e-34	94.20	Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696...	[more]
A0A7S3K4A4_9STRA	1.410e-33	95.38	Hypothetical protein n=2 Tax=Pelagomonadales TaxID...	[more]
A0A485KUJ5_9STRA	2.000e-33	95.31	Aste57867_11335 protein n=36 Tax=Stramenopiles Tax...	[more]
A0A662XJ11_9STRA	1.000e-32	92.96	Uncharacterized protein n=1 Tax=Nothophytophthora ...	[more]
A0A1V9YV47_9STRA	3.040e-32	96.97	Target of rapamycin complex subunit LST8 n=1 Tax=T...	[more]
A0A7S1TRX6_9STRA	3.640e-32	98.31	Hypothetical protein (Fragment) n=2 Tax=Phaeomonas...	[more]
A0A5A8CTE5_CAFRO	3.560e-31	84.51	Uncharacterized protein n=1 Tax=Cafeteria roenberg...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 26..54 e-value: 1.2E-9 score: 48.0
IPR002048	EF-hand domain	PFAM	PF13405	EF-hand_6	coord: 26..55 e-value: 1.2E-10 score: 40.5
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 22..57 score: 17.889
None	No IPR available	GENE3D	1.10.238.10		coord: 2..72 e-value: 5.9E-19 score: 69.9
None	No IPR available	PANTHER	PTHR23050	CALCIUM BINDING PROTEIN	coord: 11..71
None	No IPR available	PANTHER	PTHR23050:SF318		coord: 11..71
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 35..47
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 17..72

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig70631	contig	H-elongata_contig70631:2823..3038 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig70631.14725.1	mRNA_H-elongata_contig70631.14725.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig70631 2823..3038 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig70631.14725.1 ID=prot_H-elongata_contig70631.14725.1|Name=mRNA_H-elongata_contig70631.14725.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp
QARRTPAKRIAKTYERPGLSEEEIEEIREAFNLFDTDGSGTIDPKELKAA
MQSLGFEAKNQTIYQMISDIDK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002048	EF_hand_dom
IPR018247	EF_Hand_1_Ca_BS
IPR011992	EF-hand-dom_pair