prot_H-elongata_contig70614.14720.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70614.14720.1
Unique Nameprot_H-elongata_contig70614.14720.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length155
Homology
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BLAST of mRNA_H-elongata_contig70614.14720.1 vs. uniprot
Match: D8LR20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR20_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 3.230e-12
Identity = 36/48 (75.00%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:   75 AGDGTGGLPGVEGMDLLSMSRATDKFQEQMDSMARRLEGVKMHEQQEE 122
            A DG+GGL GVEGMDLLSM++  DKFQEQMDSM RR+EGV++HEQ+EE
Sbjct:  289 AADGSGGLHGVEGMDLLSMAQKADKFQEQMDSMKRRMEGVELHEQKEE 336
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70614.14720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LR20_ECTSI3.230e-1275.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 130..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70614contigH-elongata_contig70614:245..2080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70614.14720.1mRNA_H-elongata_contig70614.14720.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70614 245..2080 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70614.14720.1 ID=prot_H-elongata_contig70614.14720.1|Name=mRNA_H-elongata_contig70614.14720.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=155bp
ATPPNQEEINKIWASTVERASMRGRRRWGGAGEDGGSLGHGSTSRWGGDR
SNSYRLDRQESEEDPWDDVSAGAEAGDGTGGLPGVEGMDLLSMSRATDKF
QEQMDSMARRLEGVKMHEQQEEDMRKERDKEFQRRRLAAAESSQQQQQQQ
QQQSP
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