prot_H-elongata_contig70591.14717.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70591.14717.1
Unique Nameprot_H-elongata_contig70591.14717.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length63
Homology
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: D8LF53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF53_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 2.900e-42
Identity = 57/62 (91.94%), Postives = 62/62 (100.00%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGEKW 62
            +PPACRFLPTCSVYGV+AIEKFGPTKGAVLTAWRLMRCNPFAGYG+DYP+WPPPGWFAGE+W
Sbjct:   94 IPPACRFLPTCSVYGVQAIEKFGPTKGAVLTAWRLMRCNPFAGYGVDYPQWPPPGWFAGERW 155          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S1U9Q3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Q3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.580e-27
Identity = 41/59 (69.49%), Postives = 49/59 (83.05%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAG 59
            M PACRFLPTCS Y +++I+ +GP KG VLTAWR++RCNPF G G D P+WPPPGWFAG
Sbjct:   90 MAPACRFLPTCSGYSIDSIKTYGPWKGLVLTAWRILRCNPFGGSGYDPPQWPPPGWFAG 148          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A4D9DFE3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DFE3_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.410e-27
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAG 59
            +P ACRF PTCS Y +E+++KFGP KGAVLTAWRL+RCNP  G G D P+WPPPGW AG
Sbjct:   83 LPQACRFFPTCSEYAIESVQKFGPAKGAVLTAWRLLRCNPLGGRGWDPPQWPPPGWKAG 141          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: W7TML8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TML8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.740e-26
Identity = 41/59 (69.49%), Postives = 48/59 (81.36%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAG 59
            +P ACRF PTCS Y +E+++KFGP KGAVLTAWRL+RCNP  G G D P+WPPPGW AG
Sbjct:  181 LPQACRFFPTCSEYAIESVQKFGPAKGAVLTAWRLLRCNPLGGRGWDPPQWPPPGWKAG 239          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: B8BR73_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR73_THAPS)

HSP 1 Score: 99.0 bits (245), Expect = 7.410e-26
Identity = 40/60 (66.67%), Postives = 48/60 (80.00%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGE 60
            +PPACRFLPTCS YGV+AIE+FGP+KG +LTAWRL RC+PF G G D P+WPP  +  G 
Sbjct:   20 LPPACRFLPTCSQYGVQAIEEFGPSKGVLLTAWRLARCSPFGGRGYDPPKWPPVAYNYGS 79          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S0QB70_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QB70_9EUKA)

HSP 1 Score: 102 bits (253), Expect = 9.680e-26
Identity = 37/61 (60.66%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGEK 61
            +PP CRF+PTCS Y +++ E+F P + AVLT WRL+RCNP AGYG+D P+WPPPG++AG +
Sbjct:   56 LPPGCRFVPTCSEYAIQSFEQFSPVQAAVLTVWRLVRCNPTAGYGVDAPQWPPPGYWAGSQ 116          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S2R8H5_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R8H5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.030e-25
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPP 53
            +PPACRFLPTCS YGV+AIE+FGP+KG VLTAWRL+RC+PF G G D P+WPP
Sbjct:   82 LPPACRFLPTCSQYGVQAIEEFGPSKGVVLTAWRLLRCSPFGGKGYDPPKWPP 134          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S2ENE8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ENE8_TRICV)

HSP 1 Score: 102 bits (254), Expect = 2.440e-25
Identity = 41/53 (77.36%), Postives = 48/53 (90.57%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPP 53
            +PPACRF+PTCS YGV+AI++FGPTKGA+LTAWRLMRC+PF G G D PRWPP
Sbjct:  189 LPPACRFVPTCSQYGVQAIQEFGPTKGAMLTAWRLMRCSPFGGKGYDPPRWPP 241          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S0GAD0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAD0_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 2.970e-24
Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGE 60
            +PPACRFLPTCS YGV AIE+FGP KGAVLTAWRL+RC+P  G G D P+WPP  +  G 
Sbjct:  117 LPPACRFLPTCSQYGVGAIEEFGPGKGAVLTAWRLLRCSPVGGRGYDPPKWPPVAYTYGS 176          
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Match: A0A7S1XBZ4_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XBZ4_9RHOD)

HSP 1 Score: 95.9 bits (237), Expect = 3.450e-24
Identity = 38/60 (63.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query:    1 MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPRWPPPGWFAGE 60
            MPP CRFLP+CS Y +EAI++FGP KG VLTAWR++RCNPF G G D P+WPP  + +G 
Sbjct:   57 MPPNCRFLPSCSSYSIEAIQEFGPAKGLVLTAWRILRCNPFGGAGYDPPQWPPVHFRSGS 116          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70591.14717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF53_ECTSI2.900e-4291.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1U9Q3_9STRA1.580e-2769.49Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A4D9DFE3_9STRA2.410e-2769.49Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TML8_9STRA2.740e-2669.49Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
B8BR73_THAPS7.410e-2666.67Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0QB70_9EUKA9.680e-2660.66Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S2R8H5_9STRA1.030e-2575.47Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2ENE8_TRICV2.440e-2577.36Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0GAD0_9STRA2.970e-2468.33Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1XBZ4_9RHOD3.450e-2463.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002696Putative membrane protein insertion efficiency factorSMARTSM01234Haemolytic_2coord: 1..49
e-value: 1.9E-14
score: 64.0
IPR002696Putative membrane protein insertion efficiency factorPFAMPF01809YidDcoord: 3..48
e-value: 9.1E-20
score: 70.3
IPR002696Putative membrane protein insertion efficiency factorTIGRFAMTIGR00278TIGR00278coord: 1..49
e-value: 3.3E-17
score: 60.1
IPR002696Putative membrane protein insertion efficiency factorPANTHERPTHR33383FAMILY NOT NAMEDcoord: 1..53
NoneNo IPR availablePRODOMPD004225coord: 1..50
e-value: 7.0E-12
score: 164.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70591contigH-elongata_contig70591:2367..2555 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70591.14717.1mRNA_H-elongata_contig70591.14717.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70591 2367..2579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70591.14717.1 ID=prot_H-elongata_contig70591.14717.1|Name=mRNA_H-elongata_contig70591.14717.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=63bp
MPPACRFLPTCSVYGVEAIEKFGPTKGAVLTAWRLMRCNPFAGYGIDYPR
WPPPGWFAGEKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002696Membr_insert_effic_factor