prot_H-elongata_contig7059.14715.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7059.14715.1
Unique Nameprot_H-elongata_contig7059.14715.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length133
Homology
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BLAST of mRNA_H-elongata_contig7059.14715.1 vs. uniprot
Match: D7G453_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G453_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 2.270e-53
Identity = 76/100 (76.00%), Postives = 91/100 (91.00%), Query Frame = 0 
Query:   33 VSGVGGIGSNALLVLSGLLVVKGLLLPEDIRHLSFCPSEDPVRGRDTLPWRMMVDSGRECGTIREVMTKYVTAPVVFPGTPEWGMMLNVKEDRAKSAWLE 132
            +SGVG +GSN LL+++ ++VVKGLLLPE++RHL FCP+EDP+RGRDTLPWRMM++SGRECGTI EVMTKYVTAP+ FPGTPEWGMMLN KED AK AWL+
Sbjct:  110 MSGVGSVGSNVLLLVASVMVVKGLLLPENVRHLGFCPTEDPIRGRDTLPWRMMIESGRECGTIPEVMTKYVTAPLAFPGTPEWGMMLNTKEDLAKDAWLQ 209
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7059.14715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G453_ECTSI2.270e-5376.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 31..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7059contigH-elongata_contig7059:5348..9407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7059.14715.1mRNA_H-elongata_contig7059.14715.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7059 4118..9420 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7059.14715.1 ID=prot_H-elongata_contig7059.14715.1|Name=mRNA_H-elongata_contig7059.14715.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=133bp
MTESLLTAKKGGVADPDAGSSIDAKKEKKIGNVSGVGGIGSNALLVLSGL
LVVKGLLLPEDIRHLSFCPSEDPVRGRDTLPWRMMVDSGRECGTIREVMT
KYVTAPVVFPGTPEWGMMLNVKEDRAKSAWLE*
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