prot_H-elongata_contig7056.14709.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7056.14709.1
Unique Nameprot_H-elongata_contig7056.14709.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length40
Homology
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BLAST of mRNA_H-elongata_contig7056.14709.1 vs. uniprot
Match: D8LPY7_ECTSI (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPY7_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.740e-11
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0 
Query:    1 VIRLLPGWIAERVVKPPNFGGSFVALRNFFAQMHAR 36
            V+RLLPGWIAERVVKP NFG  FV+LR FFA+MHAR
Sbjct: 1041 VVRLLPGWIAERVVKPANFGQCFVSLRRFFAEMHAR 1076
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7056.14709.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPY7_ECTSI1.740e-1180.56Helicase ATP-binding domain-containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7056contigH-elongata_contig7056:8317..8436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7056.14709.1mRNA_H-elongata_contig7056.14709.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7056 8317..8436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7056.14709.1 ID=prot_H-elongata_contig7056.14709.1|Name=mRNA_H-elongata_contig7056.14709.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=40bp
VIRLLPGWIAERVVKPPNFGGSFVALRNFFAQMHARKVS*
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