prot_H-elongata_contig70282.14685.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70282.14685.1
Unique Nameprot_H-elongata_contig70282.14685.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length105
Homology
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.640e-57
Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0
Query:    1 RYVRETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            RY +ETYDKIK+GVDFYWTGTKILG+DVGYALTLVSKA QGSIL PREVRTLRRTAKDC+TFIPFVVILIFPLTPVGHVLVFSFIQRFFP+FFPSTYTDRRQNLL
Sbjct:  648 RYAKETYDKIKSGVDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVVILIFPLTPVGHVLVFSFIQRFFPNFFPSTYTDRRQNLL 752          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: D8LP03_ECTSI (LETM1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP03_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.760e-56
Identity = 93/105 (88.57%), Postives = 101/105 (96.19%), Query Frame = 0
Query:    1 RYVRETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            RY +ETYDKIK+G+DFYWTGTKILG+DVGYALTLVSKA QGSIL PREVRTLRRTAKDC+TFIPFV+ILI PL+PVGHVLVFSFIQRFFP+FFPSTYTDRRQNLL
Sbjct:  465 RYAKETYDKIKSGLDFYWTGTKILGNDVGYALTLVSKAVQGSILNPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPNFFPSTYTDRRQNLL 569          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A836CA55_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA55_9STRA)

HSP 1 Score: 157 bits (396), Expect = 2.390e-45
Identity = 76/105 (72.38%), Postives = 90/105 (85.71%), Query Frame = 0
Query:    1 RYVRETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            RYVRET +K+++ +DFY TGTK+LG D+ YAL LV KA QG  LKPREVRTLRR+ KD LT IP ++ILI PL+PVGHVLVFSFIQR+FPDFFPST+T+RRQNLL
Sbjct:  157 RYVRETVEKLRSALDFYVTGTKLLGQDIQYALALVGKAIQGYTLKPREVRTLRRSGKDLLTLIPTIIILILPLSPVGHVLVFSFIQRYFPDFFPSTFTERRQNLL 261          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A4D9D1V1_9STRA (LETM1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V1_9STRA)

HSP 1 Score: 151 bits (381), Expect = 1.790e-40
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0
Query:    2 YVRETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNL 104
            YV+++  KIKNGV FY TG K+L SD+ YA  L+S+AAQG  LKPREVRTL+RTAKD LT IPF +ILIFPLTP+GHVLVFS IQR FPDFFPST+T+RRQNL
Sbjct:  602 YVQDSIGKIKNGVSFYVTGAKLLTSDLQYAWWLISRAAQGYTLKPREVRTLQRTAKDLLTLIPFTIILIFPLTPIGHVLVFSLIQRIFPDFFPSTFTERRQNL 704          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A7S2SGM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGM0_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.830e-38
Identity = 65/99 (65.66%), Postives = 83/99 (83.84%), Query Frame = 0
Query:    7 YDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            + K++ G+ FY TGT++LG D+ YA++L+ KA QG+ L PRE RTLRRTAKD +T +PFV+IL+ PL+PVGHVLVFSFIQR FPDF PSTYT+RRQNL+
Sbjct:  242 WSKLQAGLSFYTTGTRLLGDDLNYAVSLLGKAVQGTTLAPREARTLRRTAKDLVTLVPFVIILLIPLSPVGHVLVFSFIQRVFPDFMPSTYTERRQNLM 340          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A7S2X822_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2X822_9EUKA)

HSP 1 Score: 133 bits (335), Expect = 1.240e-37
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 0
Query:    4 RETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            ++T  K+K  + FY  GTK+LG+D+ YAL L+++A  G  LKPRE R L+RTAKD LT +PF +IL+ PLTPVGHVLVFS IQ+FFPDF+PS YT+RRQNL+
Sbjct:   62 KDTVTKLKMALSFYVLGTKLLGNDIQYALWLIARAIDGDTLKPREARMLQRTAKDLLTLLPFTIILLIPLTPVGHVLVFSAIQKFFPDFYPSPYTERRQNLV 163          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: L1IDU4_GUITC (LETM1 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDU4_GUITC)

HSP 1 Score: 141 bits (355), Expect = 7.020e-37
Identity = 68/97 (70.10%), Postives = 82/97 (84.54%), Query Frame = 0
Query:    9 KIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            K  +G  FY  G+K+LG+DV YA+ L+ KAA G  L+PREVRTLRRTAKD +TFIPF++IL+ PL+PVGHVLVFSFIQRFFPDFFP+ YTDRRQNL+
Sbjct:  590 KFADGARFYVEGSKLLGTDVQYAVRLIIKAALGDTLQPREVRTLRRTAKDLITFIPFIIILLIPLSPVGHVLVFSFIQRFFPDFFPTPYTDRRQNLM 686          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A7J7ICI1_9RHOD (LETM1 domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICI1_9RHOD)

HSP 1 Score: 134 bits (336), Expect = 8.790e-37
Identity = 61/105 (58.10%), Postives = 79/105 (75.24%), Query Frame = 0
Query:    1 RYVRETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            +Y+ E   K K G +FYW G ++LG D+ Y L L+ +AA G  L PREVRT+RRT +D LT +PF ++L  PLTPVGHV+VFSFIQR+FP FFPST+TD+RQ L+
Sbjct:   55 QYLAEMSQKTKEGGEFYWRGVRLLGGDIMYTLRLIQRAAAGYTLTPREVRTIRRTGRDILTLVPFGILLALPLTPVGHVMVFSFIQRYFPSFFPSTFTDKRQELM 159          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A7S2XTH3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTH3_9STRA)

HSP 1 Score: 135 bits (340), Expect = 1.670e-36
Identity = 68/103 (66.02%), Postives = 80/103 (77.67%), Query Frame = 0
Query:    2 YVRETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNL 104
            +VRE + KI+ GV F+  G K+ G D  YA  LV++AA G  L+PREVRTLRRT KD  T IP  +ILI PL+PVGHVLVFSFIQRFFPDFFPS++TDRRQNL
Sbjct:  195 FVRENFQKIQEGVAFFVLGLKLFGQDAQYAGWLVTRAAGGYTLQPREVRTLRRTVKDLFTLIPCAIILIIPLSPVGHVLVFSFIQRFFPDFFPSSFTDRRQNL 297          
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Match: A0A7S3E6R9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E6R9_9RHOD)

HSP 1 Score: 132 bits (332), Expect = 5.310e-36
Identity = 61/97 (62.89%), Postives = 79/97 (81.44%), Query Frame = 0
Query:    9 KIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVRTLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLL 105
            K+K G +F++ G ++L  DV YA  L+ KAA G IL PREVRTLRRT +D ++FIPF +IL+ PLTP+GHVLVFSFIQRFFPDFFP+T+++RRQ L+
Sbjct:  124 KMKEGTEFFFRGLRLLAGDVAYAFRLIRKAAVGFILSPREVRTLRRTGRDLISFIPFSIILLLPLTPIGHVLVFSFIQRFFPDFFPTTFSERRQQLM 220          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70282.14685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LQ87_9PHAE1.640e-5792.38LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LP03_ECTSI1.760e-5688.57LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CA55_9STRA2.390e-4572.38LETM1 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A4D9D1V1_9STRA1.790e-4072.82LETM1 domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S2SGM0_9STRA3.830e-3865.66Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2X822_9EUKA1.240e-3761.76Hypothetical protein n=2 Tax=Lotharella TaxID=7481... [more]
L1IDU4_GUITC7.020e-3770.10LETM1 domain-containing protein n=2 Tax=Guillardia... [more]
A0A7J7ICI1_9RHOD8.790e-3758.10LETM1 domain-containing protein n=1 Tax=Cyanidioco... [more]
A0A7S2XTH3_9STRA1.670e-3666.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3E6R9_9RHOD5.310e-3662.89Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011685LETM1-likePFAMPF07766LETM1coord: 8..102
e-value: 5.3E-17
score: 62.0
NoneNo IPR availablePANTHERPTHR14009LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEINcoord: 4..104
NoneNo IPR availablePANTHERPTHR14009:SF33coord: 4..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..59
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 60..85
NoneNo IPR availableTMHMMTMhelixcoord: 60..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70282contigH-elongata_contig70282:1453..3222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70282.14685.1mRNA_H-elongata_contig70282.14685.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70282 1453..3222 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70282.14685.1 ID=prot_H-elongata_contig70282.14685.1|Name=mRNA_H-elongata_contig70282.14685.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=105bp
RYVRETYDKIKNGVDFYWTGTKILGSDVGYALTLVSKAAQGSILKPREVR
TLRRTAKDCLTFIPFVVILIFPLTPVGHVLVFSFIQRFFPDFFPSTYTDR
RQNLL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011685LETM1