prot_H-elongata_contig70165.14676.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70165.14676.1
Unique Nameprot_H-elongata_contig70165.14676.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length139
Homology
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: A0A6H5K5P3_9PHAE (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5P3_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 2.850e-59
Identity = 103/138 (74.64%), Postives = 107/138 (77.54%), Query Frame = 0
Query:    1 GLRQLRSAKTLYILVSEFGSTRATVLGLPLEFFRRTHNAFEHSGLDQSLALSMELLGEAVKAVPDPGALADASVVEFVTNAVNACAEVLSWEFVFVEAWQIPPTQQLITPGPRWRQYLVRPDFLGVVFQVYHRVIAWG 138
            G   LRSAK L+ LVSEF STRAT LGLPLEFFR TH AF   GLDQSLALSMELLGE VK V  P AL+D SV+E VT  VN CAEVLSWEF +VEAWQIPP QQLI PGPRWR YLVRPDFLG VF VYHRV   G
Sbjct:  143 GAAALRSAKALFSLVSEFSSTRATALGLPLEFFRATHAAFNKFGLDQSLALSMELLGETVKVVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWRTYLVRPDFLGAVFNVYHRVRLRG 280          
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: D7FX52_ECTSI (Importin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX52_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 4.830e-59
Identity = 104/138 (75.36%), Postives = 108/138 (78.26%), Query Frame = 0
Query:    1 GLRQLRSAKTLYILVSEFGSTRATVLGLPLEFFRRTHNAFEHSGLDQSLALSMELLGEAVKAVPDPGALADASVVEFVTNAVNACAEVLSWEFVFVEAWQIPPTQQLITPGPRWRQYLVRPDFLGVVFQVYHRVIAWG 138
            G   LRSAK L+ LVSEF STRAT LGLPLEFFR TH AF   GLDQSLALSMELLGE VKAV  P AL+D SV+E VT  VN CAEVLSWEF +VEAWQIPP QQLI PGPRWR YLVRPDFLG VF VYHRV   G
Sbjct:  143 GAAALRSAKALFSLVSEFSSTRATALGLPLEFFRATHAAFNKLGLDQSLALSMELLGETVKAVATPEALSDTSVLELVTTVVNVCAEVLSWEFKYVEAWQIPPAQQLIRPGPRWRAYLVRPDFLGAVFNVYHRVRLRG 280          
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: A0A7S3PXS9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PXS9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 6.430e-15
Identity = 51/120 (42.50%), Postives = 62/120 (51.67%), Query Frame = 0
Query:   14 LVSEFG-STRATVLGLPLEFFRRTHNAFEHSGLDQSLALSMELLGEAVKAVPDPGALADASVVEFVTNAVNACAEVLSWEFVFVEA-WQIPPTQQLITPGPRWRQYLVRPDFLGVVFQVY 131
            LV EFG S  A      LEF R  H AFE  G+   L +S+  L  AV  +    +L DAS        VN   +VLSWEF  +   W    +  L+ P   WR+YL+RPDFLG VFQVY
Sbjct:  231 LVGEFGGSNTAAAYNCSLEFHRLAHVAFEEKGILDLLKISINGLSGAVTKLSSDPSLVDASC-----GVVNLTIDVLSWEFGSLGGKWGRTGSSALVRPPESWREYLIRPDFLGAVFQVY 345          
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: W7TRX6_9STRA (Importin-beta n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRX6_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.410e-12
Identity = 53/140 (37.86%), Postives = 67/140 (47.86%), Query Frame = 0
Query:   11 LYILVSEFGSTRATVLGLPLEFFRRTHNAFEHSGLDQSLALSMELLGEAVK----AVPDPGAL---------ADASVVEFVTNA-VNACAEVLSWEFVFVEAWQIPP--TQQLITPGPRWRQYLVRPDFLGVVFQVYHRV 134
            L  LV EF + ++  LGLPLEF R+ H AFE  GL   L + M +L   V+    A+P  G           ADA       NA V  C E LSW+F   +  Q P   T   I+P   WR YL+R D L  +  VY R+
Sbjct:  158 LLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGCLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRL 297          
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: A0A4D9CWA8_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA8_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 5.840e-12
Identity = 53/144 (36.81%), Postives = 70/144 (48.61%), Query Frame = 0
Query:    7 SAKTLYILVSEFGSTRATVLGLPLEFFRRTHNAFEHSGLDQSLALSMELLGEAVK----AVPDPGAL---------ADASVVEFVTNA-VNACAEVLSWEFVFVEAWQIPP--TQQLITPGPRWRQYLVRPDFLGVVFQVYHRV 134
            +++ L  LV EF + ++  LGLPLEF R+ H AFE  GL   L + M +L   V+    A+P  G           ADA       NA V  C E LSW+F   +  Q P   T   I+P   WR YL+R D L  +  VY R+
Sbjct:  154 ASEFLLALVGEFSTAKSAALGLPLEFHRQAHKAFEDYGLLPCLEIGMGMLARGVEETLVALPPSGQAGREGGSGLTADAHGSLLRLNAIVQLCLETLSWDFTGFDPLQEPSMKTPCFISPPIAWRPYLLRLDLLEGLVSVYTRL 297          
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: A0A7S2ANW3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANW3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.550e-8
Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = 0
Query:   40 FEHSGLDQSLALSMELLGEAVKAVPDPG-ALADASVVEFVTNAVNACAEVLSWEFVFVEAWQIPPTQQLITPGPRWRQYLVRPDFLGVVFQVYHRV 134
            FE  GL+ SL ++ME LG+A+ A      A  +  ++  +  A   C  VL+W+  +++ + IP       P   WR YLVRPD L  +F+VY  V
Sbjct:    1 FEKEGLETSLHIAMEQLGQAIGAWESRAQAGTEMRLLARLKAAGELCLAVLNWDHGWLDTYSIPGATTSNRPPQSWRSYLVRPDLLQALFRVYRAV 96          
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: A0A7S4I7Z2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I7Z2_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 2.760e-8
Identity = 50/153 (32.68%), Postives = 67/153 (43.79%), Query Frame = 0
Query:    6 RSAKTLYILVSEFGSTRATVLG---LPLEFFRRTHNAFEH-----------SGLDQSLALSMELLGEAVKAVPDPGALA--DASVVEFVTNAVNACAEVLSWEFVFV---EAWQIPPTQQ--------LITPGPRWRQYLVRPDFLGVVFQVY 131
            RSA  L  L+ EF  T +   G   +PLEF     ++FE            + LD+ + + M  LG  V+   + G     DA  VE  +  V    +VL WEF        ++I  +          L+ P  RWR  LVRPDFLG VF VY
Sbjct:   31 RSASFLSSLLGEFSGTGSGGFGGYNMPLEFHSAVRSSFESPPNAAADGAGSAALDEVMKIGMTALGGVVRIWTEGGVNGRDDARTVELSSAIVTLNCDVLGWEFNSSGGRSTFEISSSSSSFSSGKSTLVRPPERWRDVLVRPDFLGAVFAVY 183          
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Match: A0A7S2PDL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PDL1_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 2.180e-5
Identity = 26/59 (44.07%), Postives = 31/59 (52.54%), Query Frame = 0
Query:   82 VNACAEVLSWEFVFVEAW---------QIPPTQQLITPGPRWRQYLVRPDFLGVVFQVY 131
            V+   E+LSWEF    AW         Q+  +  LI P   WR YL+RPDFLG V  VY
Sbjct:   28 VSLTIEILSWEFGGGSAWNAASFASSAQVSASLVLIKPPVEWRDYLIRPDFLGAVVNVY 86          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70165.14676.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5K5P3_9PHAE2.850e-5974.64Importin N-terminal domain-containing protein n=1 ... [more]
D7FX52_ECTSI4.830e-5975.36Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S3PXS9_9STRA6.430e-1542.50Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
W7TRX6_9STRA5.410e-1237.86Importin-beta n=1 Tax=Nannochloropsis gaditana Tax... [more]
A0A4D9CWA8_9STRA5.840e-1236.81Importin N-terminal domain-containing protein n=1 ... [more]
A0A7S2ANW3_9STRA2.550e-835.42Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4I7Z2_9STRA2.760e-832.68Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S2PDL1_9STRA2.180e-544.07Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12596:SF1EXPORTIN-4coord: 7..135
NoneNo IPR availablePANTHERPTHR12596EXPORTIN 4,7-RELATEDcoord: 7..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70165contigH-elongata_contig70165:927..2602 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70165.14676.1mRNA_H-elongata_contig70165.14676.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70165 927..2602 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70165.14676.1 ID=prot_H-elongata_contig70165.14676.1|Name=mRNA_H-elongata_contig70165.14676.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=139bp
GLRQLRSAKTLYILVSEFGSTRATVLGLPLEFFRRTHNAFEHSGLDQSLA
LSMELLGEAVKAVPDPGALADASVVEFVTNAVNACAEVLSWEFVFVEAWQ
IPPTQQLITPGPRWRQYLVRPDFLGVVFQVYHRVIAWG*
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