prot_H-elongata_contig701.14666.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig701.14666.1
Unique Nameprot_H-elongata_contig701.14666.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length357
Homology
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BLAST of mRNA_H-elongata_contig701.14666.1 vs. uniprot
Match: D7FPB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB0_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 3.290e-119
Identity = 207/362 (57.18%), Postives = 252/362 (69.61%), Query Frame = 0 
Query:    1 KGLFEALVKWCFNEVASLAQDCQDNLRQCHDSERAATMVPSAKKGIGGSDQKCNNG------GRSTSVVFTGGVPGGVGIGWRKKKDVEGARFSEDNLEVAMDVARTCMSMFVYLVTHGYWQRALHAGVLAHANSVPIGAGDDPHVTGSLSRLVFELSRFALTSEEGRLSFVAQGPLDAVLRCLRLGKVAQQQCALDTLTNICAVNEMKVLVFSQEVLNEVLELAAVQENVPFAAGVLFQFSLIPEWRLPLVRGGCLRLLVDAITHATGPVASPTELVVSLLRSAVATIRQITKLEGSGREVINAGGLPQLIRLSRADQEASIQRDARHALENIGHIGSHRDEERRKRGDEEENSAITVVTD 356
            +GLFEALV  CFNEVAS    CQ+ LRQ  + E   +                          R  S+V TGG+  G G G R+K + EG RF+E+ LEVAMDVARTCM+MF +L   G+ +RALHAGVLAH NSVPIGAGDDPH+TGSLS+LV +LS  A+  EE RLSFV QGPLDA++RCLR G+ AQQQCALD LT +C ++EMK LVF +EVL EVL LAAVQE+V  AA VL QFSL+ EWR PLVRGGC+ LLV AI HATGP A P E    +L SAVA IRQITKLEG+GR +++AGGL QL+RLSR+++E +I+RDA  AL++IGH G  RD ER  + + +E    +  TD
Sbjct:   21 EGLFEALVGLCFNEVASFVHGCQNYLRQRREIEGVFSSAXXXXXXXXXXXXXXXXXXXXXXXARCESIVSTGGMSAGAGAGGRRK-EAEG-RFTEEKLEVAMDVARTCMAMFAHLTARGHGRRALHAGVLAHINSVPIGAGDDPHMTGSLSQLVLDLSAVAMEGEENRLSFVGQGPLDAIMRCLRGGRAAQQQCALDALTTVCLLSEMKPLVFCREVLGEVLMLAAVQEHVQPAAFVLHQFSLLSEWRSPLVRGGCVDLLVAAIAHATGPEAPPQEEACPILESAVAAIRQITKLEGAGRVLVDAGGLSQLLRLSRSERE-NIRRDACQALKHIGHRG--RDRERDHKSESQETVEGSASTD 377
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BLAST of mRNA_H-elongata_contig701.14666.1 vs. uniprot
Match: A0A6H5KGE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGE2_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 1.790e-30
Identity = 64/103 (62.14%), Postives = 82/103 (79.61%), Query Frame = 0 
Query:  234 QFSLIPEWRLPLVRGGCLRLLVDAITHATGPVASPTELVVSLLRSAVATIRQITKLEGSGREVINAGGLPQLIRLSRADQEASIQRDARHALENIGHIGSHRD 336
            +FSL+ EWR PLVRGGC+ LLV AI HATGP A P E    +L SAVA IRQITKLEG+GR +++AGGLPQL+RLSR+++E +I+RDA  AL+++GH G  R+
Sbjct:    9 KFSLLSEWRSPLVRGGCVDLLVAAIAHATGPEAPPQEEACPILESAVAAIRQITKLEGAGRVLVDAGGLPQLLRLSRSERE-NIRRDACQALKHMGHRGRARE 110
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig701.14666.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPB0_ECTSI3.290e-11957.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGE2_9PHAE1.790e-3062.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 238..288
e-value: 170.0
score: 3.7
coord: 289..330
e-value: 6.9
score: 14.5
coord: 158..198
e-value: 12.0
score: 12.8
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 135..349
e-value: 1.2E-12
score: 49.2
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 147..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig701contigH-elongata_contig701:7648..13451 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig701.14666.1mRNA_H-elongata_contig701.14666.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig701 7648..13451 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig701.14666.1 ID=prot_H-elongata_contig701.14666.1|Name=mRNA_H-elongata_contig701.14666.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bp
KGLFEALVKWCFNEVASLAQDCQDNLRQCHDSERAATMVPSAKKGIGGSD
QKCNNGGRSTSVVFTGGVPGGVGIGWRKKKDVEGARFSEDNLEVAMDVAR
TCMSMFVYLVTHGYWQRALHAGVLAHANSVPIGAGDDPHVTGSLSRLVFE
LSRFALTSEEGRLSFVAQGPLDAVLRCLRLGKVAQQQCALDTLTNICAVN
EMKVLVFSQEVLNEVLELAAVQENVPFAAGVLFQFSLIPEWRLPLVRGGC
LRLLVDAITHATGPVASPTELVVSLLRSAVATIRQITKLEGSGREVINAG
GLPQLIRLSRADQEASIQRDARHALENIGHIGSHRDEERRKRGDEEENSA
ITVVTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold