prot_H-elongata_contig7003.14659.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig7003.14659.1
Unique Nameprot_H-elongata_contig7003.14659.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length236
Homology
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BLAST of mRNA_H-elongata_contig7003.14659.1 vs. uniprot
Match: D8LQ19_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ19_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 5.380e-35
Identity = 112/287 (39.02%), Postives = 135/287 (47.04%), Query Frame = 0 
Query:   23 MRDFERGTAKNTRKALLKND-VELCRPPSPQEFDGGRDHDSDDES----GSRCHAP-RFVPGDPFANEEADTEAWAKHFTYLSIFPSASLSSDSRALREEDNRRNG-----------GCNEALRVVSEAPGASRVEG--VDD----------GAKREEE----EVVLAKHGIYEEYLAYDCRPPR-DEI-----------EEGCRDEAKS-------------------GMRLSAVDLTRRSKLPASV---------RLRTPQRALREEVMDRLFDELWERLAPDLL 236
            MR+FER +A+NTR+ALL ND + LC PP+     G  D+D    S          P R+VPGDPFANEEAD  AWAKHFTYLS+ P+          R  DN   G              + +    E  G + VEG  + D            +R EE    E V A HG+YEEYLAYDCRPP  D++           EE  R  AK                    G  +S    +    L AS          RL TPQR LR+E+MDRLFDELWER+ PDLL
Sbjct:   57 MREFERSSAENTREALLDNDALLLCEPPASANA-GSADNDGRQTSPLSPXXXXXVPLRYVPGDPFANEEADVGAWAKHFTYLSVVPTERGEGGDAEKRSNDNAGGGLLERGPVAEPPPVRDVMETDEETGGVAAVEGSRIQDLTPEEAAAELAGRRLEEMPQGEEVFASHGVYEEYLAYDCRPPGFDDVTSPGGETMGPGEEDPRLAAKGSGAWAVTGVVPNANSAVGQGAWVSNNAASEPPALGASTTGGSHRVVARLDTPQRELRQEIMDRLFDELWERITPDLL 342
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig7003.14659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ19_ECTSI5.380e-3539.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig7003contigH-elongata_contig7003:9667..10374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig7003.14659.1mRNA_H-elongata_contig7003.14659.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig7003 9667..10374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig7003.14659.1 ID=prot_H-elongata_contig7003.14659.1|Name=mRNA_H-elongata_contig7003.14659.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=236bp
GGGWDTSSDEGATGTKQAGGLRMRDFERGTAKNTRKALLKNDVELCRPPS
PQEFDGGRDHDSDDESGSRCHAPRFVPGDPFANEEADTEAWAKHFTYLSI
FPSASLSSDSRALREEDNRRNGGCNEALRVVSEAPGASRVEGVDDGAKRE
EEEVVLAKHGIYEEYLAYDCRPPRDEIEEGCRDEAKSGMRLSAVDLTRRS
KLPASVRLRTPQRALREEVMDRLFDELWERLAPDLL
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