prot_H-elongata_contig70020.14654.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig70020.14654.1
Unique Nameprot_H-elongata_contig70020.14654.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
BLAST of mRNA_H-elongata_contig70020.14654.1 vs. uniprot
Match: D8LC53_ECTSI (Ankyrin domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC53_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 9.830e-12
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MLQLLVSAGSDINAQNIVGDAPLHKAALNGRALSADF 37
            ML+LL+ AGS+INAQNIVGDAPLHKAALNGRALSAD+
Sbjct:   25 MLELLLRAGSNINAQNIVGDAPLHKAALNGRALSADY 61          
BLAST of mRNA_H-elongata_contig70020.14654.1 vs. uniprot
Match: A0A6H5J6H7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6H7_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 9.830e-12
Identity = 32/37 (86.49%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MLQLLVSAGSDINAQNIVGDAPLHKAALNGRALSADF 37
            ML+LL+ AGS+INAQNIVGDAPLHKAALNGRALSAD+
Sbjct:  107 MLELLLRAGSNINAQNIVGDAPLHKAALNGRALSADY 143          
BLAST of mRNA_H-elongata_contig70020.14654.1 vs. uniprot
Match: A0A8J9UWK9_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9UWK9_BRAAE)

HSP 1 Score: 49.7 bits (117), Expect = 1.290e-5
Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 MLQLLVSAGSDINAQNIVGDAPLHKAALNGRALSADFLIREGANVNIR 48
            M  +LVS G+D+NAQ+I G +PL  A  N    +A+FLI +GANVN+R
Sbjct: 3978 MANVLVSNGADLNAQDINGYSPLMFAVDNNHTETAEFLINQGANVNLR 4025          
BLAST of mRNA_H-elongata_contig70020.14654.1 vs. uniprot
Match: UPI001FE04429 (ankyrin repeat domain-containing protein n=1 Tax=Nocardia concava TaxID=257281 RepID=UPI001FE04429)

HSP 1 Score: 45.4 bits (106), Expect = 5.480e-5
Identity = 21/47 (44.68%), Postives = 29/47 (61.70%), Query Frame = 0
Query:    2 LQLLVSAGSDINAQNIVGDAPLHKAALNGRALSADFLIREGANVNIR 48
            L LL+ AG+D+N    +G  PLH A   G+  + DFLI  GA++ IR
Sbjct:   21 LSLLLKAGADVNQLGDMGQTPLHNAYTTGQTEAVDFLIANGASLEIR 67          
BLAST of mRNA_H-elongata_contig70020.14654.1 vs. uniprot
Match: A0A7S1YDE2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1YDE2_9EUKA)

HSP 1 Score: 47.8 bits (112), Expect = 6.040e-5
Identity = 22/46 (47.83%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    1 MLQLLVSAGSDINAQNIVGDAPLHKAALNGRALSADFLIREGANVN 46
            +L LL+ AG+ ++A N +G+ PLH AA +G   +A FL+R GANV+
Sbjct:   82 LLDLLLGAGATLDADNGLGETPLHYAAFHGNPAAARFLLRLGANVH 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig70020.14654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LC53_ECTSI9.830e-1286.49Ankyrin domain protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5J6H7_9PHAE9.830e-1286.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A8J9UWK9_BRAAE1.290e-552.08Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
UPI001FE044295.480e-544.68ankyrin repeat domain-containing protein n=1 Tax=N... [more]
A0A7S1YDE2_9EUKA6.040e-547.83Hypothetical protein (Fragment) n=1 Tax=Sexangular... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..48
e-value: 2.1E-11
score: 45.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..48
NoneNo IPR availablePFAMPF13637Ank_4coord: 1..31
e-value: 9.8E-6
score: 26.0
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..48
score: 17.635
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 18..48
score: 11.648

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig70020contigH-elongata_contig70020:2917..3060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig70020.14654.1mRNA_H-elongata_contig70020.14654.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig70020 2917..3063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig70020.14654.1 ID=prot_H-elongata_contig70020.14654.1|Name=mRNA_H-elongata_contig70020.14654.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
MLQLLVSAGSDINAQNIVGDAPLHKAALNGRALSADFLIREGANVNIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt