prot_H-elongata_contig6997.14643.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig6997.14643.1
Unique Nameprot_H-elongata_contig6997.14643.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length176
Homology
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: D7FPE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPE0_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 4.860e-88
Identity = 129/182 (70.88%), Postives = 151/182 (82.97%), Query Frame = 0
Query:    1 VFTGAFFICALVVASIDNAGFDVVLTGLILCVWELGAMWLLKKGPHETSLGFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIFILIQRRGVLTREDFDAAGGSYGDYGDGAY-------DRWVRPPADEHLGAAEGLGATVTPVPETSDL 175
            VFT AFFICALVVASIDNAGFDVVLTGL+LCVWE+GAMWLLK+GPH+TSLGFLIGVT+VLN+ITLMTAIYWGQLA C+++YDGDYDQYSCSN+SAMRGVAAFASIIWVLQLPFI++L+QRRGVLTRED+  +GG Y DY D A+         W +PP D+       +  + +  PET+DL
Sbjct:   39 VFTAAFFICALVVASIDNAGFDVVLTGLLLCVWEVGAMWLLKRGPHDTSLGFLIGVTLVLNVITLMTAIYWGQLAGCDSDYDGDYDQYSCSNKSAMRGVAAFASIIWVLQLPFIYLLVQRRGVLTREDYATSGGRYADYDDPAFAPGERDSGGWGKPPVDDGSPRVGAVVGSSSGTPETTDL 220          
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: A0A835Z3N9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N9_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.110e-32
Identity = 61/124 (49.19%), Postives = 83/124 (66.94%), Query Frame = 0
Query:    3 TGAFFICALVVASIDNAGFDVVLTGLILCVWELGAMWLLKKGPHETSLGFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYD--QYSCSNRSAMRGVAAFASIIWVLQLPFIFILIQRRGVL 124
            T  F ICA VVA    AG   VLT L L  WE G++ L+++GP   S GFL+G ++V+  +T  TA+YWGQLA C+T Y GD    +YSC++R AMRG  AFA +IW++QLPF+ + + +R VL
Sbjct:   27 TVPFAICACVVAGTAAAGAGAVLTALALLAWEAGSIALMQRGPAALSQGFLVGASLVMTALTFETAVYWGQLAQCDT-YSGDVALARYSCAHRGAMRGACAFAVLIWLVQLPFVALAVAQRHVL 149          
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: A0A7S2V692_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V692_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.360e-27
Identity = 58/110 (52.73%), Postives = 77/110 (70.00%), Query Frame = 0
Query:    1 VFTGAFFICALVVASIDNAGFDVVLTGLILCVWELGAMWLLKKGPHETSLGFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVAAFASIIWVLQ 110
            V T  + IC+ VVAS  NAGF+ VLTGL+  V+ +GA  +L K     S+GFLIG + +L +++L TAIYWGQLANCET  +    QYSCSN+S  R V AFAS++++LQ
Sbjct:   22 VLTACYLICSFVVASTANAGFNAVLTGLVYAVYCVGAYQVLHKSKTALSVGFLIGFSALLIVLSLETAIYWGQLANCETVSES-ISQYSCSNKSGYRAVCAFASLLFILQ 130          
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: W7TS32_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS32_9STRA)

HSP 1 Score: 101 bits (252), Expect = 7.610e-24
Identity = 55/138 (39.86%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    1 VFTGAFFICALVVASIDNAGFDVVLTGLILCVWELGAMWLLKKGPHETSLGFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIFILIQRRGVLTREDFDAAGGSYGD 138
            VF   + IC+ VVAS  N GF+ VLT L+   +  G   +L++     ++GF++GV++++  ++LMTAI+WGQLANC   Y  D  +YSC+NRSA     AFA++++++QL F   L     VL R++F     +Y D
Sbjct:   22 VFVLCYTICSFVVASTANMGFNAVLTALLYIFYVAGTYHVLQRSKMPLAVGFVLGVSVMITFLSLMTAIFWGQLANCSPGYY-DIKRYSCTNRSAYSATCAFATLLFLVQLVFTSAL-----VLWRDEFIQDSSAYDD 153          
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: A0A7S2S6Q8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Q8_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.000e-16
Identity = 45/110 (40.91%), Postives = 67/110 (60.91%), Query Frame = 0
Query:    2 FTGAFFICALVVASIDNAGFDVVLTGLILCVWELGAMWLLKKGPH-ETSLGFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVAAFASIIWVLQ 110
            FTG FFICA V A   N GF+VV T           + ++ +  H +  +GFL+G++     ++L TAI+WGQLA+C+  +     QYSCSN SA + V AFA+++++LQ
Sbjct:   33 FTGCFFICACVAAKTANMGFNVVFTSFCFGFHVAVGILVIHRSLHTQLWVGFLLGLSGATAWLSLQTAIFWGQLADCD-RHAHHLSQYSCSNVSAYKAVCAFAALLFILQ 141          
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: D8LG48_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG48_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.530e-15
Identity = 56/151 (37.09%), Postives = 83/151 (54.97%), Query Frame = 0
Query:    1 VFTGAFFICALVVASIDNAGFDVVLTGLILCVWE--LGAMWLLKK---GPHETSL-------GFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIFILIQRRGVLTREDFDAAGGSYGDY 139
            V T  FFICA VV+S  NAG +VVLT ++   +   L  ++  K+   G  +T++       G LIG+T ++  ++LMTA+YWGQ++ CE + D D D YSC N   M  VA FAS + + +   +  LI     L +ED     G Y ++
Sbjct:   28 VLTICFFICACVVSSNANAGLNVVLTAMMYVAYVGLLAVVFNRKRATDGGMDTAMAIEPIVGGGLIGITTMMCFLSLMTAVYWGQMSGCEDDTD-DVDGYSCYNSFGMAAVAWFASFLLISEAVTLAALI-----LWKEDMFFVDGGYDNF 172          
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: A0A7R9U3K6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3K6_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.840e-12
Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0
Query:    2 FTGAFFICALVVASIDNAGFDVVLTGLILCVWELGAMWLLKKGPHETSLGFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVAAFASIIWVLQ 110
            F   FFICA VV+S  NAGF+   T L+  ++ +  +  +  G +      L+GV   + ++   TAI+WGQLA+CE   + +   YSCS RSA     AFA ++++ Q
Sbjct:   47 FAFCFFICACVVSSTANAGFNAFTTALLNIIFCVVMIRAINFGRNALLSNVLVGVGYTMMLMNFQTAIFWGQLADCEKVKE-EIPGYSCSTRSAYGATCAFAVLLFLAQ 154          
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Match: A0A2D4BZK0_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZK0_PYTIN)

HSP 1 Score: 57.8 bits (138), Expect = 2.760e-7
Identity = 35/118 (29.66%), Postives = 63/118 (53.39%), Query Frame = 0
Query:    9 CALVVASI-----DNAGFDVVLTGLILCVWELGAMWLLKKGPHETSLGFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVAAFASIIWVLQLPFIFILIQRR 121
            C L VA++        GF+  LT  +  V+  GA+ +L K P   S+G LIG ++++ +++L  AIYWG +A           + + +  SA    + F S+I+V+QL   +I+++ +
Sbjct:   21 CGLXVATLFLLETPYVGFNAFLTASLHVVYAFGAIVILNKSPSAYSIGILIGASLLILVLSLEGAIYWGLVA-----------RDNLNRESASIAASGFHSLIFVIQLAVTWIVVKAK 127          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig6997.14643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPE0_ECTSI4.860e-8870.88Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3N9_9STRA4.110e-3249.19Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S2V692_9STRA1.360e-2752.73Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7TS32_9STRA7.610e-2439.86Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2S6Q8_9STRA3.000e-1640.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LG48_ECTSI1.530e-1537.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7R9U3K6_9STRA5.840e-1236.70Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A2D4BZK0_PYTIN2.760e-729.66Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 42..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..98
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 24..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..71
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..175
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig6997contigH-elongata_contig6997:5143..7024 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig6997.14643.1mRNA_H-elongata_contig6997.14643.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig6997 5143..7024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig6997.14643.1 ID=prot_H-elongata_contig6997.14643.1|Name=mRNA_H-elongata_contig6997.14643.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=176bp
VFTGAFFICALVVASIDNAGFDVVLTGLILCVWELGAMWLLKKGPHETSL
GFLIGVTIVLNMITLMTAIYWGQLANCETEYDGDYDQYSCSNRSAMRGVA
AFASIIWVLQLPFIFILIQRRGVLTREDFDAAGGSYGDYGDGAYDRWVRP
PADEHLGAAEGLGATVTPVPETSDL*
back to top