prot_H-elongata_contig69956.14641.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69956.14641.1
Unique Nameprot_H-elongata_contig69956.14641.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length485
Homology
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BLAST of mRNA_H-elongata_contig69956.14641.1 vs. uniprot
Match: D8LBI1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBI1_ECTSI)

HSP 1 Score: 463 bits (1191), Expect = 4.100e-156
Identity = 281/484 (58.06%), Postives = 330/484 (68.18%), Query Frame = 0 
Query:    1 MLRSGLLRLATHAHVREACGS-IINIRGCGNRMGSRAWLSAMIGGESSGADDPTPAETKLAFTSTVYGKDPAAGSELTASEAAAAENLKRAA----VKPGEAPASRGSDPRAMFDSTLSQQTVDRKAFSDIKREVASGTPDATRVAFRASAYGKDPEMAATLSEKNIVELEELRVKTNICGAASSGVAPIHDSRNMFDSDLAHGSGTTAASVDVNRDVVADTPDVTRIAFRASVYGKDPQAAAELSAQEAAEVEALSKTAARRSDAAGNVAPVHDDRSMFDSDLEHSVGMAAASDSIKRDVTANTPDATRVAFRASVYGKDPQAAVALSEEEAAGVDALLEAAAGVSGASG-AAPVHHDRSMFDSDLVHGVGAADAYDSIKRDVFTDTPEVTRVVFGGSDYGKDPRSMCRTAEEQTAVDRLAARARRESEAEARRSKAPVHNHRSLYDSDLAQGAGVMMEFEAIKREVEPDTPALTRLSFFGST 478
            MLR G+ R+A +A  ++ C + + N+       G+RAWLSA  GG+SS +DD TP +TKLAF+S+VYGKDPA+G E TA EAAAA  LKR A     + G A A+   D R MFDS+LSQQ  D K    IKR+VA+ TPDATRVAF A+AYGKDPE AA LS +   E+E LR +    G A +  AP+HD RNMFDSDL  G+G+T A   + RDV  DTPD TR+AFRAS YGKDPQ AA LS QEAAEVEAL   A  R  AA   APVHD RSMFDSDL    G    SDSIKR+V+ +TPDATRVAFRASVYGKD QAA ALSE+EAA VD L   A G   +S  AAPVH  RSMFDSDL  G GA    DSIKR V  +TPE TR+VF GSDYGKDPRS+  + +++  +  LA R    + A A    AP+H+ RS++DSDLA+GAG   E  AIKR VE  TPALTRLSFFGST
Sbjct:    1 MLRRGIFRVAVYARSQKTCAAGVKNLPAAA--AGTRAWLSATSGGDSSDSDDVTPPKTKLAFSSSVYGKDPASGGEPTAEEAAAAAQLKREAEAGTAREGAA-AAPVHDNRNMFDSSLSQQAEDGKESGSIKRDVAADTPDATRVAFGATAYGKDPEAAAALSAQEAEEVEALRARAKGDGVAGAAAAPLHDRRNMFDSDLTQGAGSTQAFDAIKRDVKTDTPDATRVAFRASAYGKDPQTAAALSEQEAAEVEALRMRAQGRGAAAA--APVHDSRSMFDSDLTQGAGSTQGSDSIKREVSGDTPDATRVAFRASVYGKDGQAAAALSEQEAAEVDELRVRAHGAGASSADAAPVHDSRSMFDSDLTQGAGAMQGSDSIKRHVAANTPEATRLVFAGSDYGKDPRSVDNSEKKKAEIAALAERVGAGTPAAA---AAPIHHDRSMFDSDLAEGAGAARESTAIKRHVETATPALTRLSFFGST 476
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69956.14641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBI1_ECTSI4.100e-15658.06Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69956contigH-elongata_contig69956:402..1856 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69956.14641.1mRNA_H-elongata_contig69956.14641.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69956 402..1856 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69956.14641.1 ID=prot_H-elongata_contig69956.14641.1|Name=mRNA_H-elongata_contig69956.14641.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=485bp
MLRSGLLRLATHAHVREACGSIINIRGCGNRMGSRAWLSAMIGGESSGAD
DPTPAETKLAFTSTVYGKDPAAGSELTASEAAAAENLKRAAVKPGEAPAS
RGSDPRAMFDSTLSQQTVDRKAFSDIKREVASGTPDATRVAFRASAYGKD
PEMAATLSEKNIVELEELRVKTNICGAASSGVAPIHDSRNMFDSDLAHGS
GTTAASVDVNRDVVADTPDVTRIAFRASVYGKDPQAAAELSAQEAAEVEA
LSKTAARRSDAAGNVAPVHDDRSMFDSDLEHSVGMAAASDSIKRDVTANT
PDATRVAFRASVYGKDPQAAVALSEEEAAGVDALLEAAAGVSGASGAAPV
HHDRSMFDSDLVHGVGAADAYDSIKRDVFTDTPEVTRVVFGGSDYGKDPR
SMCRTAEEQTAVDRLAARARRESEAEARRSKAPVHNHRSLYDSDLAQGAG
VMMEFEAIKREVEPDTPALTRLSFFGSTCEFYPS*
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