prot_H-elongata_contig69948.14640.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig69948.14640.1
Unique Name	prot_H-elongata_contig69948.14640.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	110

Homology

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A6H5KP27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP27_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 6.350e-59
Identity = 88/110 (80.00%), Postives = 102/110 (92.73%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCPEGCVACIHDHGCTGYNSIIDKQAALIVLRRLIE 110
            +HAVGHALL+VVPLFLLCD  DVDCEH RPH+ RPQP+RILV+DKRPGGVGV+DAMFGCHR  L+KALELVEGCPCPEGC+ACIHDHGCTGYN+IIDK+AA+++L  LI+
Sbjct: 1259 IHAVGHALLAVVPLFLLCDAADVDCEHARPHHSRPQPQRILVFDKRPGGVGVSDAMFGCHRGVLSKALELVEGCPCPEGCLACIHDHGCTGYNAIIDKRAAVVILESLIQ 1368

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: D8LLG5_ECTSI (DEAD/DEAH box helicase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG5_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.910e-51
Identity = 77/94 (81.91%), Postives = 88/94 (93.62%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCPEGCVACIHDHGCTGYNS 94
            +HAVGHALL+VVPLFLLCD  DVDCEH RPH+ RPQP+RILV+D+RPGGVGV+DAMFGCHR  L+KALELVEGCPCP+GC+ACIHDHGCTGYN+
Sbjct:  817 IHAVGHALLAVVPLFLLCDAADVDCEHARPHHSRPQPQRILVFDRRPGGVGVSDAMFGCHRGVLSKALELVEGCPCPDGCLACIHDHGCTGYNA 910

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A7S2AHT8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AHT8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 7.970e-33
Identity = 53/106 (50.00%), Postives = 77/106 (72.64%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGC-HRAALTKALELVEGCPCPEGCVACIHDHGCTGYNSIIDKQAALIVL 105
            +HA+ H L+++ PLF+LCD +D+D EHV  + QRP+P R++VYDKRPGGVG+A+A++ C   A L+KA +LV  C C  GC  CIHD  C+G N  + K+ A+++L
Sbjct:  245 VHALNHVLVAIAPLFILCDKDDIDTEHVYVYQQRPRPARLIVYDKRPGGVGIAEALYCCGSHAVLSKAYDLVTSCSCAYGCPGCIHDPRCSGQNESLFKEGAILIL 350

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A4D9D1F7_9STRA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1F7_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.530e-31
Identity = 54/112 (48.21%), Postives = 77/112 (68.75%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCP--EGCVACIHDHGCTGYNSIIDKQAALIVLRRLIE 110
            +HA+ HALL+V PLFL CDP D++ EH     QRP+P R+ VYDKRPGG+G +D +F      L++AL L+  CPC    GC +C+    C+ YN+++ K AAL++LRRL++
Sbjct:  287 LHAINHALLAVTPLFLKCDPGDIEAEHAHVQYQRPRPPRVCVYDKRPGGIGASDGLFSALPHVLSQALALLASCPCDLLSGCPSCLVLPSCSSYNTVLHKPAALLLLRRLLD 398

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: F0W7W2_9STRA (DEAD/DEAH box RNA helicase putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W7W2_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.390e-28
Identity = 49/110 (44.55%), Postives = 70/110 (63.64%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCPEGCVACIHDHGCTGYNSIIDKQAALIVLRRLIE 110
            +H VGH L S+VPLF+ CDP D+D EH  P  QR +PRRI +Y+KR GG G+   +       +TK+  L+  C C EGC +C+H   CT +N ++DK+ A  +L+ +IE
Sbjct:  937 LHGVGHLLTSLVPLFIRCDPGDIDTEHYHPKEQRSRPRRITMYEKREGGTGIVSELQSVFAELVTKSFALLIECSCLEGCPSCVHSTRCTEHNEVLDKEGARCILKFIIE 1046

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A8K1CRR0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRR0_PYTOL)

HSP 1 Score: 116 bits (291), Expect = 4.610e-28
Identity = 51/110 (46.36%), Postives = 71/110 (64.55%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCPEGCVACIHDHGCTGYNSIIDKQAALIVLRRLIE 110
            +H VGH LL+VVPLF+LCD  D+D EH  P  +R +P RI +Y+ R GG G+ + +     A L KA  + + C C  GC +CIH   CT YN+++DK+ +LIVL  L+E
Sbjct:  893 LHGVGHLLLAVVPLFVLCDAGDIDSEHYNPFERRSRPNRITIYEHREGGSGIVEEIVRSLPAILFKAWTIADECSCIVGCPSCIHSAQCTEYNNVLDKRGSLIVLEHLVE 1002

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A5A8EQ68_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EQ68_CAFRO)

HSP 1 Score: 114 bits (285), Expect = 2.620e-27
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 0

Query:    2 HAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCPEGCVACIHDHGCTGYNSIIDKQAALIVLRRLI 109
            HA  HAL++ +P F+LCD  D+  +   P  +R +P R++VYD R GG+GVA A F   R    +AL ++E CPC  GC +C HD  C GYN +IDK AA+I+LR ++
Sbjct:  491 HAASHALVAALPQFVLCDRSDLGMDCANPLAERARPLRVMVYDNRMGGIGVAAAAFQRARRMFRQALAILESCPCVPGCPSCCHDPACRGYNYVIDKPAAIIILRGVL 598

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A7S3NQ71_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NQ71_9STRA)

HSP 1 Score: 114 bits (284), Expect = 4.050e-27
Identity = 49/112 (43.75%), Postives = 77/112 (68.75%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPC--PEGCVACIHDHGCTGYNSIIDKQAALIVLRRLIE 110
            +HA  HA+L++VPLF++CD  DV+ EHV    +RP+P RI+++D RPGG+GVA A+F    A +++AL L+  CPC    GC +C+    CT +N  +D +AA+I+ R +++
Sbjct:  759 IHACTHAILNIVPLFVVCDNTDVNAEHVYISQKRPRPARIIIFDTRPGGIGVAHAIFRRIYAVISEALRLITECPCHAQSGCPSCLFSASCTAHNLALDSRAAIIIFRAILK 870

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A0G4EC89_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EC89_VITBC)

HSP 1 Score: 111 bits (277), Expect = 3.640e-26
Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCPEGCVACIHDHGCTGYNSIIDKQAALIVLRRLI 109
            +H   HALL+VVPLF+LCD  D+ CE   P ++R +P R++V+D  PGGVG++   F   R     AL+LV  C C +GC AC+    C  YN++I K AAL+VLR ++
Sbjct: 1457 IHGAEHALLAVVPLFVLCDRTDISCECPNPWDERLRPLRLVVFDSTPGGVGISMRAFQQARGIARAALQLVNDCTCDQGCPACVCHPNCGEYNAVISKPAALVVLRAMV 1565

[Close]

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Match: A0A1Y1IHD6_KLENI (ATP-dependent helicase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHD6_KLENI)

HSP 1 Score: 110 bits (274), Expect = 9.310e-26
Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 0

Query:    1 MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGVGVADAMFGCHRAALTKALELVEGCPCP--EGCVACIHDHGCTGYNSIIDKQAALIVLRRLI 109
            +HA GHA+L+V+PL+++C P D+ CE   P + R +P R+LVYDK+P G+G+A          L  ALEL+E C C   +GC  C+H  GC  YN  +DK+ A+ +L+ +I
Sbjct: 1848 LHAAGHAILNVLPLYVMCSPNDIGCECASPDDTRFRPERLLVYDKQPDGIGIAVQARPMFAELLQAALELLEACECTLSDGCPGCVHHTGCGEYNRCLDKRYAIAILKSVI 1958

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot

BLAST of mRNA_H-elongata_contig69948.14640.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KP27_9PHAE	6.350e-59	80.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LLG5_ECTSI	1.910e-51	81.91	DEAD/DEAH box helicase domain-containing protein n...	[more]
A0A7S2AHT8_9STRA	7.970e-33	50.00	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A4D9D1F7_9STRA	1.530e-31	48.21	Helicase ATP-binding domain-containing protein (Fr...	[more]
F0W7W2_9STRA	3.390e-28	44.55	DEAD/DEAH box RNA helicase putative n=1 Tax=Albugo...	[more]
A0A8K1CRR0_PYTOL	4.610e-28	46.36	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A5A8EQ68_CAFRO	2.620e-27	46.30	Uncharacterized protein n=1 Tax=Cafeteria roenberg...	[more]
A0A7S3NQ71_9STRA	4.050e-27	43.75	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A0G4EC89_VITBC	3.640e-26	45.87	Uncharacterized protein n=3 Tax=Vitrella brassicaf...	[more]
A0A1Y1IHD6_KLENI	9.310e-26	43.24	ATP-dependent helicase n=1 Tax=Klebsormidium niten...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018973	DEAD/DEAH-box helicase, putative	PFAM	PF09369	DUF1998	coord: 5..84 e-value: 2.3E-21 score: 76.3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..110
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..25
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..25 score: 0.634

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig69948	contig	H-elongata_contig69948:465..1518 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig69948.14640.1	mRNA_H-elongata_contig69948.14640.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig69948 447..1518 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig69948.14640.1 ID=prot_H-elongata_contig69948.14640.1|Name=mRNA_H-elongata_contig69948.14640.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=110bp
MHAVGHALLSVVPLFLLCDPEDVDCEHVRPHNQRPQPRRILVYDKRPGGV
GVADAMFGCHRAALTKALELVEGCPCPEGCVACIHDHGCTGYNSIIDKQA
ALIVLRRLIE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018973	DEAD/DEAH-box_helicase