prot_H-elongata_contig69883.14636.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig69883.14636.1
Unique Name	prot_H-elongata_contig69883.14636.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	95

Homology

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: D7FPL9_ECTSI (Polyribonucleotide nucleotidyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL9_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.960e-45
Identity = 82/91 (90.11%), Postives = 88/91 (96.70%), Query Frame = 0

Query:    1 RLYLHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            RLYLHYEFPPYCVNETG++G VNRRMVGHG+LAER+VL VMP+TETFPYTTRVSAEVTMSNGSSSMAT CATSLALMDAGVPVS+PVGGIS
Sbjct:  406 RLYLHYEFPPYCVNETGRVGLVNRRMVGHGNLAERAVLSVMPETETFPYTTRVSAEVTMSNGSSSMATACATSLALMDAGVPVSSPVGGIS 496

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A4D9CRD5_9STRA (Polyribonucleotide nucleotidyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRD5_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.440e-35
Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 0

Query:    1 RLYLHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            + +LHY+FPPY VNETGK+ G NRRMVGHG+LAER++LPV+P ++ FPYT R+++EVT SNGSSSMA+ CA SLALMDAGVPV APV G+S
Sbjct:  465 KAFLHYDFPPYSVNETGKVFGSNRRMVGHGALAERAILPVLPSSDVFPYTIRITSEVTASNGSSSMASACAASLALMDAGVPVKAPVAGVS 555

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: F0WH72_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WH72_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.200e-35
Identity = 61/88 (69.32%), Postives = 78/88 (88.64%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPPYCVNETG++GG+NRRMVGHG+LAE+++LP++P  E FPYT R+++E+T S+GSSSMAT C  SLAL+DAGVP+ AP+ GIS
Sbjct:  474 LHYEFPPYCVNETGRLGGINRRMVGHGALAEKAILPILPSIEEFPYTIRMTSEITGSDGSSSMATICGVSLALLDAGVPIEAPIAGIS 561

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A024G5H3_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5H3_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.160e-35
Identity = 60/88 (68.18%), Postives = 78/88 (88.64%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPPYCVNETG++GG+NRRM+GHG+LAE+++LP++P T  FPYT R+++E+T S+GSSSMAT C  SLAL+DAGVP+ AP+ GIS
Sbjct:  420 LHYEFPPYCVNETGRLGGINRRMIGHGALAEKAILPILPSTTEFPYTIRMTSEITGSDGSSSMATICGVSLALLDAGVPIEAPIAGIS 507

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: K3WQA1_GLOUD (Polyribonucleotide nucleotidyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WQA1_GLOUD)

HSP 1 Score: 132 bits (332), Expect = 6.850e-34
Identity = 61/88 (69.32%), Postives = 76/88 (86.36%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPPYCVNETG++GGVNRRM+GHG+LAE++++PV+P  + FPYT R+++E   S+GSSSMAT C  SLALMDAGVP+ APV GIS
Sbjct:  358 LHYEFPPYCVNETGRVGGVNRRMIGHGALAEKALVPVIPSIDQFPYTVRMTSETMGSDGSSSMATVCGVSLALMDAGVPIKAPVAGIS 445

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A8K1CU08_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU08_PYTOL)

HSP 1 Score: 131 bits (329), Expect = 1.870e-33
Identity = 59/88 (67.05%), Postives = 76/88 (86.36%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPPYCVNETG++GG+NRRMVGHG+LAE++++PV+P  + FPYT R+++E   S+GSSSMAT C  ++ALMDAGVP+ APV GIS
Sbjct:  489 LHYEFPPYCVNETGRVGGINRRMVGHGALAEKAIVPVIPSIDEFPYTVRMTSETMGSDGSSSMATVCGVTMALMDAGVPIKAPVAGIS 576

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A5D6Y279_9STRA (Polyribonucleotide nucleotidyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y279_9STRA)

HSP 1 Score: 130 bits (326), Expect = 4.750e-33
Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPPYCVNETG++GGVNRRM+GHG+LAE++++PV+P  + FPYT R+++E   S+GSSSMA  C  SLALMDAGVP+ +PV GIS
Sbjct:  487 LHYEFPPYCVNETGRVGGVNRRMIGHGALAEKALVPVIPSIDEFPYTVRMTSETMSSDGSSSMAAVCGVSLALMDAGVPIKSPVAGIS 574

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A3F2S3N1_9STRA (Polyribonucleotide nucleotidyltransferase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S3N1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 8.900e-33
Identity = 60/88 (68.18%), Postives = 75/88 (85.23%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPP+CVNETG++GG NRRM+GHG+LAE++VLPV+P    FPYT R+++EV  S+GSSSMAT C  SLALMDAGVP+S+ V GI+
Sbjct:  492 LHYEFPPFCVNETGRVGGANRRMIGHGALAEKAVLPVLPSVTEFPYTVRMTSEVVGSDGSSSMATVCGVSLALMDAGVPISSAVAGIA 579

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BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: H3G590_PHYRM (Polyribonucleotide nucleotidyltransferase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G590_PHYRM)

HSP 1 Score: 126 bits (317), Expect = 6.990e-32
Identity = 59/88 (67.05%), Postives = 73/88 (82.95%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPP+CVNETG++GG NRRM+GHG+LAE++VLP++P    FPYT R+++EV  S+GSSSMAT C  SLALMDAGVPV   V GI+
Sbjct:  393 LHYEFPPFCVNETGRVGGTNRRMIGHGALAEKAVLPILPSVTEFPYTVRMTSEVVGSDGSSSMATVCGVSLALMDAGVPVRRAVAGIA 480

[Close]

BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Match: A0A2D4C0M0_PYTIN (Polyribonucleotide nucleotidyltransferase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C0M0_PYTIN)

HSP 1 Score: 126 bits (317), Expect = 7.790e-32
Identity = 59/88 (67.05%), Postives = 75/88 (85.23%), Query Frame = 0

Query:    4 LHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYTTRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGIS 91
            LHYEFPPYCVNETG++ GVNRRMVGHG+LAE++++PV+P  + FPYT R+++E   S+GSSSMAT C  ++ALMDAGVP+ APV GIS
Sbjct:  491 LHYEFPPYCVNETGRMSGVNRRMVGHGALAEKALVPVIPAIDEFPYTIRMTSETMGSDGSSSMATVCGVTMALMDAGVPIKAPVAGIS 578

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot

BLAST of mRNA_H-elongata_contig69883.14636.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FPL9_ECTSI	1.960e-45	90.11	Polyribonucleotide nucleotidyltransferase n=2 Tax=...	[more]
A0A4D9CRD5_9STRA	2.440e-35	70.33	Polyribonucleotide nucleotidyltransferase n=3 Tax=...	[more]
F0WH72_9STRA	3.200e-35	69.32	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
A0A024G5H3_9STRA	4.160e-35	68.18	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
K3WQA1_GLOUD	6.850e-34	69.32	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
A0A8K1CU08_PYTOL	1.870e-33	67.05	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A5D6Y279_9STRA	4.750e-33	67.05	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
A0A3F2S3N1_9STRA	8.900e-33	68.18	Polyribonucleotide nucleotidyltransferase n=4 Tax=...	[more]
H3G590_PHYRM	6.990e-32	67.05	Polyribonucleotide nucleotidyltransferase n=1 Tax=...	[more]
A0A2D4C0M0_PYTIN	7.790e-32	67.05	Polyribonucleotide nucleotidyltransferase n=2 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027408	PNPase/RNase PH domain superfamily	GENE3D	3.30.230.70		coord: 1..94 e-value: 3.0E-34 score: 120.2
IPR001247	Exoribonuclease, phosphorolytic domain 1	PFAM	PF01138	RNase_PH	coord: 2..82 e-value: 1.9E-9 score: 38.1
IPR012162	Polyribonucleotide nucleotidyltransferase	PANTHER	PTHR11252	POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE	coord: 1..91
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 2..91

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig69883	contig	H-elongata_contig69883:1601..2829 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig69883.14636.1	mRNA_H-elongata_contig69883.14636.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig69883 1601..2829 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig69883.14636.1 ID=prot_H-elongata_contig69883.14636.1|Name=mRNA_H-elongata_contig69883.14636.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=95bp
RLYLHYEFPPYCVNETGKIGGVNRRMVGHGSLAERSVLPVMPDTETFPYT
TRVSAEVTMSNGSSSMATTCATSLALMDAGVPVSAPVGGISGEI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027408	PNPase/RNase_PH_dom_sf
IPR001247	ExoRNase_PH_dom1
IPR012162	PNPase
IPR020568	Ribosomal_S5_D2-typ_fold