prot_H-elongata_contig69844.14634.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69844.14634.1
Unique Nameprot_H-elongata_contig69844.14634.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length58
Homology
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BLAST of mRNA_H-elongata_contig69844.14634.1 vs. uniprot
Match: A0A6H5JPT0_9PHAE (Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT0_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 2.180e-21
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:   10 SQHWDKDVCLNFADRCLSFLKDNVDEGPRYSFKYAEPFDEITLEVLGAQ 58
            ++HWDKDVCLNFADRCLSFLKDNVDEG RYSFKY EPFD +TLE L  Q
Sbjct:  236 NKHWDKDVCLNFADRCLSFLKDNVDEGLRYSFKYLEPFDHLTLEQLAPQ 284
[Close]
BLAST of mRNA_H-elongata_contig69844.14634.1 vs. uniprot
Match: D8LT56_ECTSI (Decapping nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT56_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 6.610e-21
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:   10 SQHWDKDVCLNFADRCLSFLKDNVDEGPRYSFKYAEPFDEITLEVLGAQ 58
            ++HWDKDVCLNFADRCLSFLKDNVDEG RYSFKY EPFD +TLE L  Q
Sbjct:  360 NKHWDKDVCLNFADRCLSFLKDNVDEGLRYSFKYLEPFDHLTLEQLAPQ 408
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69844.14634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JPT0_9PHAE2.180e-2181.63Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 131... [more]
D8LT56_ECTSI6.610e-2181.63Decapping nuclease n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69844contigH-elongata_contig69844:325..498 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69844.14634.1mRNA_H-elongata_contig69844.14634.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69844 325..498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69844.14634.1 ID=prot_H-elongata_contig69844.14634.1|Name=mRNA_H-elongata_contig69844.14634.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=58bp
PRCFHGRSLSQHWDKDVCLNFADRCLSFLKDNVDEGPRYSFKYAEPFDEI
TLEVLGAQ
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