prot_H-elongata_contig69701.14620.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69701.14620.1
Unique Nameprot_H-elongata_contig69701.14620.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: D8LJP2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP2_ECTSI)

HSP 1 Score: 238 bits (606), Expect = 4.850e-77
Identity = 126/156 (80.77%), Postives = 133/156 (85.26%), Query Frame = 0
Query:    1 MGTWTEGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSG---RAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKAV 153
            MG+WTEGLVGVSLIAIGLLGLKESLL+ EE PAFEAKSAGSAVVEG                RAIF NGVLHGFSWDGAPSLAPALALSSW SVLWFLLAYCSGTMVAMSATTT+IGEGS+RVGKALD+PDIPRKLS+VSSFVAI IG +W AKAV
Sbjct:   80 MGSWTEGLVGVSLIAIGLLGLKESLLDYEETPAFEAKSAGSAVVEGXXXXXXXXXXXXXXGERAIFFNGVLHGFSWDGAPSLAPALALSSWGSVLWFLLAYCSGTMVAMSATTTLIGEGSVRVGKALDQPDIPRKLSVVSSFVAITIGAVWLAKAV 235          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A835YVB1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVB1_9STRA)

HSP 1 Score: 183 bits (465), Expect = 9.760e-56
Identity = 96/152 (63.16%), Postives = 116/152 (76.32%), Query Frame = 0
Query:    1 MGTWTEGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKA 152
            +GT+TE LVGVSLI IGL+GLKESLL++          A +A  E  G    +   G  RAIFLNG+LHGFSWDGAPSLAPALA ++W  VLWFLLAYC GTM AMSA TT+IGEGS+RVG+AL++PDIP++LS+VSS +AIAIG +W  KA
Sbjct:   77 LGTYTEVLVGVSLITIGLIGLKESLLDKPH-----EDDAAAAASEISGEKSPAKRGGGQRAIFLNGLLHGFSWDGAPSLAPALACTTWHGVLWFLLAYCGGTMAAMSAATTIIGEGSVRVGQALEQPDIPKRLSVVSSGIAIAIGAVWLVKA 223          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A4D9DEM4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DEM4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.850e-41
Identity = 77/153 (50.33%), Postives = 106/153 (69.28%), Query Frame = 0
Query:    1 MGTWTEGLVGVSLIAIGLLGLKESL-LEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKA 152
            +  +TE L+GVSLI IGLLGLKE+   +       EA+ +    + G      +  K +G+A+FLNG+LHGFSWDG P+LAPALA  SW  V+ FL +Y  GTM++MS  T++IGEG+++VG+ALDKP+IP+KL+  SS VAI +G +W  KA
Sbjct:   87 LSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGS----IAGSAASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKA 235          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: W7TPT7_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPT7_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.010e-40
Identity = 78/153 (50.98%), Postives = 107/153 (69.93%), Query Frame = 0
Query:    1 MGTWTEGLVGVSLIAIGLLGLKESL-LEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKA 152
            +  +TE L+GVSLI IGLLGLKE+   +       EA+ +    + G G    +  K +G+A+FLNG+LHGFSWDG P+LAPALA  SW  V+ FL +Y  GTM++MS  T++IGEG+++VG+ALDKP+IP+KL+  SS VAI +G +W  KA
Sbjct:  211 LSLYTEVLIGVSLIIIGLLGLKEAAHFDVSAVMPLEAEGS----ITGSGASGAAKKKATGKAVFLNGLLHGFSWDGTPTLAPALAFDSWLPVMTFLCSYGLGTMLSMSTATSLIGEGTVKVGQALDKPNIPKKLAQGSSVVAILVGLVWTVKA 359          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A7S2KN96_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KN96_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.960e-39
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 0
Query:    2 GTWTEGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVGR-------------LSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKA 152
            G++ E  +GVSLI IGLLG+KE+  ++ EAP    + +G  +V  GG G              +SD K   RA+  NG+LHGFSWDGAPSLAPA+A+++W   L FLL+Y  GTM AM+  TT+IGEG+ R    LD+PD+PR LS+ SSF+A+ +G +W   A
Sbjct:   12 GSFMELAIGVSLIVIGLLGIKEA--KEWEAP----EDSGCDIVGEGGEGSSSSPQSLSAAAAPVSDAK---RAVLFNGILHGFSWDGAPSLAPAVAIATWRGSLTFLLSYALGTMAAMALATTIIGEGTRRAAGKLDRPDLPRDLSVASSFLALVVGIVWCGLA 166          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A7S2WPQ8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WPQ8_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.820e-38
Identity = 77/150 (51.33%), Postives = 103/150 (68.67%), Query Frame = 0
Query:    3 TWTEGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKA 152
            ++ E  VG SLI IGLLG+KE+   +EE      +S  +A  +   VG  S  K   RA+  NGVLHGFSWDGAPSLAPA+A+++W   + FLL+Y  GT+ AM+ TTT+IGEG+LR G+A ++PDIP+KLS  SS +AI +G +WF  A
Sbjct:  129 SFMELAVGASLIFIGLLGIKEAREWKEEIGNVVPQSLSAAAAD---VGAKSSPK---RAVIFNGVLHGFSWDGAPSLAPAVAVATWRGSISFLLSYALGTIAAMAITTTLIGEGTLRAGEAFNRPDIPQKLSFASSILAIGVGFVWFFLA 272          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A7R9ZRD8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRD8_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.830e-37
Identity = 73/149 (48.99%), Postives = 98/149 (65.77%), Query Frame = 0
Query:    5 TEGLVGVSLIAIGLLGLKESL-LEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKA 152
            TE  VG+SLI IG++G++E+   E E  P   AKS  +A      +   ++     R++  NG+LHGFSWDGAPSLAPALAL++W   L FL +Y +GTM AM+ TTT+IGEG+ R  +   +PDIP+KLS  SS +AIAIG +W   A
Sbjct:   46 TEIAVGLSLIIIGVMGIREAREFEAEAGPVVSAKSLSAAANSDANIKPSTN-----RSVIFNGLLHGFSWDGAPSLAPALALATWGGNLAFLSSYAAGTMAAMAVTTTLIGEGTRRASEVFQRPDIPQKLSFFSSLLAIAIGVIWCGLA 189          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A1Z5K0A1_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0A1_FISSO)

HSP 1 Score: 135 bits (339), Expect = 1.130e-36
Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 0
Query:    5 TEGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKAV 153
            TE  VG+SLI IG++G++E+   +++     A  + SA V      + S  K   RA+  NG+LHGFSWDGAPSLAPA+A+++W   L FL AY  GTM  M+  TT+IGEG+ + G+ LD+PDIP+KLS VSS +AI IG +W   AV
Sbjct:   87 TEIAVGLSLIVIGVMGIREAREWEQDLTTTMASQSLSAAVVDQVASKHSTQK---RAVLFNGILHGFSWDGAPSLAPAVAVATWGGSLAFLSAYAVGTMTTMALATTLIGEGTRKAGQVLDRPDIPQKLSFVSSILAIVIGAVWCYLAV 232          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A7S4J5J5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J5J5_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.550e-36
Identity = 77/154 (50.00%), Postives = 98/154 (63.64%), Query Frame = 0
Query:    6 EGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVGRLSDTKGSG-------RAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKA 152
            E  VG SL+ IGLLG+KE       A  +EA+      +EGG    LS   G         RA+  NGVLHGFSWDGAPSLAPA+A+++W   + FLLAY  GTM AM+ TTT+IGEG+ + G+ L +PDIP+KLS VSS +AI +G  W + A
Sbjct:  109 EVAVGASLVFIGLLGIKE-------AREWEAE------IEGGSPQSLSAAAGEDGVKVAQKRAVVFNGVLHGFSWDGAPSLAPAVAVATWRGNITFLLAYALGTMAAMTITTTLIGEGTRKAGEVLHRPDIPQKLSFVSSIIAIGVGLFWCSLA 249          
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Match: A0A7S2Y0T2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T2_9STRA)

HSP 1 Score: 135 bits (340), Expect = 5.030e-36
Identity = 78/155 (50.32%), Postives = 102/155 (65.81%), Query Frame = 0
Query:    1 MGTWTEGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVGRLSDTK-GSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCSGTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFAKAVL 154
            + TWTE LVG+SLI IG LG+KES     +  A + K           + + S  K GS ++IF NG+LHG SWDG PSLAPALA ++W  V+ FL AYC G +V+MS  T++IGEGS+RVG+  D P IP++LS+ SS +AI IG LW  K +L
Sbjct:  166 LSTWTEILVGLSLILIGFLGVKESRSFDSDKAAAKEK-----------LEQESGKKTGSFKSIFFNGLLHGLSWDGTPSLAPALAFTTWRPVVGFLSAYCWGVVVSMSMCTSLIGEGSVRVGR--DNPKIPQQLSMFSSGLAIVIGLLWTGKGIL 307          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69701.14620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJP2_ECTSI4.850e-7780.77Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVB1_9STRA9.760e-5663.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DEM4_9STRA3.850e-4150.33Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TPT7_9STRA1.010e-4050.98Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S2KN96_9STRA3.960e-3947.56Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S2WPQ8_9STRA1.820e-3851.33Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9ZRD8_9STRA1.830e-3748.99Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A1Z5K0A1_FISSO1.130e-3648.99Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S4J5J5_9STRA2.550e-3650.00Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2Y0T2_9STRA5.030e-3650.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33876FAMILY NOT NAMEDcoord: 3..151
NoneNo IPR availablePANTHERPTHR33876:SF4EXPRESSED PROTEINcoord: 3..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 151..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..150
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..113
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.577
NoneNo IPR availableTMHMMTMhelixcoord: 91..113
NoneNo IPR availableTMHMMTMhelixcoord: 133..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69701contigH-elongata_contig69701:1545..2516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69701.14620.1mRNA_H-elongata_contig69701.14620.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69701 1545..2516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69701.14620.1 ID=prot_H-elongata_contig69701.14620.1|Name=mRNA_H-elongata_contig69701.14620.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGTWTEGLVGVSLIAIGLLGLKESLLEQEEAPAFEAKSAGSAVVEGGGVG
RLSDTKGSGRAIFLNGVLHGFSWDGAPSLAPALALSSWASVLWFLLAYCS
GTMVAMSATTTVIGEGSLRVGKALDKPDIPRKLSIVSSFVAIAIGTLWFA
KAVLL*
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