prot_H-elongata_contig69699.14619.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69699.14619.1
Unique Nameprot_H-elongata_contig69699.14619.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length52
Homology
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BLAST of mRNA_H-elongata_contig69699.14619.1 vs. uniprot
Match: D7FTB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTB8_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.280e-14
Identity = 37/50 (74.00%), Postives = 42/50 (84.00%), Query Frame = 0 
Query:    2 ELERDLEEILCGRRPRVFGELPTRLGNFVRLCPATAAHRHALRLRRQVIR 51
            +LE DL++IL GRRPR  GELP R+GNFVRLCP TAAHR A RLRR+VIR
Sbjct: 1097 DLESDLDQILRGRRPRQVGELPARMGNFVRLCPGTAAHRRARRLRRKVIR 1146
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BLAST of mRNA_H-elongata_contig69699.14619.1 vs. uniprot
Match: A0A8K1CA65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CA65_PYTOL)

HSP 1 Score: 49.3 bits (116), Expect = 2.100e-5
Identity = 22/50 (44.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:    2 ELERDLEEILCGRRPRVFGELPTRLGNFVRLCPATAAHRHALRLRRQVIR 51
            +L  DL EIL GR PR++GE+P  LG + RLCP T  +   ++L++  +R
Sbjct:  992 QLNEDLTEILHGRVPRLYGEVPEHLGRYTRLCPHTTLYNQLVKLKKSCLR 1041
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69699.14619.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTB8_ECTSI2.280e-1474.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1CA65_PYTOL2.100e-544.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69699contigH-elongata_contig69699:566..721 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69699.14619.1mRNA_H-elongata_contig69699.14619.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69699 566..721 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69699.14619.1 ID=prot_H-elongata_contig69699.14619.1|Name=mRNA_H-elongata_contig69699.14619.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp
EELERDLEEILCGRRPRVFGELPTRLGNFVRLCPATAAHRHALRLRRQVI
RS
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