prot_H-elongata_contig69627.14610.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig69627.14610.1
Unique Name	prot_H-elongata_contig69627.14610.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	67

Homology

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: D7G4L2_ECTSI (MsrB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L2_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.990e-31
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 0

Query:    7 DEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            DE WKNKL PDQYYVLRMGGTEP+FTSPLN EKR+GVFVCAGC Q+L+ SSTKYNSGTGW
Sbjct:  235 DETWKNKLSPDQYYVLRMGGTEPSFTSPLNKEKREGVFVCAGCGQELYDSSTKYNSGTGW 294

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: A0A6H5KIF4_9PHAE (MsrB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIF4_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 8.480e-31
Identity = 51/60 (85.00%), Postives = 55/60 (91.67%), Query Frame = 0

Query:    7 DEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            DE WKNKL PDQYYVLRMGGTEP+FTSPLN EKR+GVFVCAGC Q+L+ SSTKYNSGTGW
Sbjct:  346 DETWKNKLSPDQYYVLRMGGTEPSFTSPLNKEKREGVFVCAGCGQELYDSSTKYNSGTGW 405

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: E0MPG8_9HYPH (Peptide methionine sulfoxide reductase MsrB n=1 Tax=Ahrensia sp. R2A130 TaxID=744979 RepID=E0MPG8_9HYPH)

HSP 1 Score: 97.8 bits (242), Expect = 1.100e-24
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 0

Query:    5 KADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            K D  W+ +L P+Q+YVLR  GTE AFTSPLN EKRDG+F+CAGC++ LF + TK++SGTGW
Sbjct:    6 KTDSQWREELTPEQFYVLREEGTERAFTSPLNDEKRDGLFICAGCEKPLFKAETKFDSGTGW 67

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: G2KME1_MICAA (Peptide-methionine (R)-S-oxide reductase n=3 Tax=Micavibrio aeruginosavorus TaxID=349221 RepID=G2KME1_MICAA)

HSP 1 Score: 97.8 bits (242), Expect = 1.840e-24
Identity = 44/63 (69.84%), Postives = 48/63 (76.19%), Query Frame = 0

Query:    4 TKADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            T +D  WK +L P+ Y+VLR  GTE AFTSPLN EKR GVF CAGCDQ LF SS KYNSGTGW
Sbjct:   26 TLSDAEWKKRLSPEAYHVLRDHGTERAFTSPLNDEKRAGVFHCAGCDQALFKSSDKYNSGTGW 88

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: UPI001ADC3651 (peptide-methionine (R)-S-oxide reductase MsrB n=1 Tax=Prochlorococcus marinus TaxID=1219 RepID=UPI001ADC3651)

HSP 1 Score: 97.8 bits (242), Expect = 2.520e-24
Identity = 41/59 (69.49%), Postives = 47/59 (79.66%), Query Frame = 0

Query:    8 EVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            E WK++L PD YY+LR  GTE AF+SPLN EKR+GVF CAGCD  LFPS  KY+SGTGW
Sbjct:   44 EEWKSRLSPDSYYILREEGTERAFSSPLNNEKREGVFHCAGCDLALFPSDKKYDSGTGW 102

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: A0A0D6AKR8_9CHRO (Peptide-methionine (R)-S-oxide reductase n=2 Tax=Geminocystis sp. NIES-3709 TaxID=1617448 RepID=A0A0D6AKR8_9CHRO)

HSP 1 Score: 97.1 bits (240), Expect = 5.190e-24
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0

Query:    4 TKADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            T +D+ WK KL P QY++LR  GTE  F+SPLN EKR G++ CAGC+  LF SSTKYNSGTGW
Sbjct:   40 TLSDKEWKKKLTPQQYHILRQEGTEKPFSSPLNNEKRKGIYACAGCNLPLFNSSTKYNSGTGW 102

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: A0A7Y4TI91_9BACT (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7Y4TI91_9BACT)

HSP 1 Score: 96.7 bits (239), Expect = 7.530e-24
Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 0

Query:    5 KADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            K++  W+ +L P+Q+ VLR  GTE AFTSPL+GE RDGVFVCAGC Q+LF S TKY+SGTGW
Sbjct:   42 KSEAQWRAELTPEQFQVLREHGTERAFTSPLDGEARDGVFVCAGCGQELFSSETKYDSGTGW 103

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: A0A512DPX5_9PROT (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512DPX5_9PROT)

HSP 1 Score: 95.9 bits (237), Expect = 1.170e-23
Identity = 41/63 (65.08%), Postives = 47/63 (74.60%), Query Frame = 0

Query:    4 TKADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            +K    W+ +L P+QYYVLR  GTE A TSPLN EKR G FVCAGC+QDLF S TK+ SGTGW
Sbjct:   30 SKPAAEWREQLTPEQYYVLREHGTERACTSPLNAEKRSGTFVCAGCEQDLFASDTKFESGTGW 92

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: F8GVU7_CUPNN (Peptide-methionine (R)-S-oxide reductase n=4 Tax=Cupriavidus TaxID=106589 RepID=F8GVU7_CUPNN)

HSP 1 Score: 95.9 bits (237), Expect = 1.760e-23
Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0

Query:    4 TKADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            T +DE W+ KL P QY VLR  GTE  F+SPLNGE R+G+F CAGC+ DLF S TK++SGTGW
Sbjct:   47 TMSDEAWRRKLSPAQYAVLRNEGTERPFSSPLNGEHRNGIFACAGCELDLFSSKTKFDSGTGW 109

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BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Match: A0A380W833_AFIFE (Peptide-methionine (R)-S-oxide reductase n=4 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A380W833_AFIFE)

HSP 1 Score: 95.5 bits (236), Expect = 2.090e-23
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0

Query:    5 KADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCDQDLFPSSTKYNSGTGW 66
            K  E WK +L P QY++LR  GTEPAF+SPLN E R G F CAGCDQ LF S TK++SGTGW
Sbjct:   37 KTPEEWKRQLTPAQYHILREEGTEPAFSSPLNNEHRKGTFACAGCDQALFASETKFDSGTGW 98

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot

BLAST of mRNA_H-elongata_contig69627.14610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G4L2_ECTSI	1.990e-31	85.00	MsrB domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5KIF4_9PHAE	8.480e-31	85.00	MsrB domain-containing protein n=1 Tax=Ectocarpus ...	[more]
E0MPG8_9HYPH	1.100e-24	62.90	Peptide methionine sulfoxide reductase MsrB n=1 Ta...	[more]
G2KME1_MICAA	1.840e-24	69.84	Peptide-methionine (R)-S-oxide reductase n=3 Tax=M...	[more]
UPI001ADC3651	2.520e-24	69.49	peptide-methionine (R)-S-oxide reductase MsrB n=1 ...	[more]
A0A0D6AKR8_9CHRO	5.190e-24	63.49	Peptide-methionine (R)-S-oxide reductase n=2 Tax=G...	[more]
A0A7Y4TI91_9BACT	7.530e-24	66.13	Peptide-methionine (R)-S-oxide reductase n=1 Tax=A...	[more]
A0A512DPX5_9PROT	1.170e-23	65.08	Peptide-methionine (R)-S-oxide reductase n=1 Tax=S...	[more]
F8GVU7_CUPNN	1.760e-23	63.49	Peptide-methionine (R)-S-oxide reductase n=4 Tax=C...	[more]
A0A380W833_AFIFE	2.090e-23	64.52	Peptide-methionine (R)-S-oxide reductase n=4 Tax=B...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002579	Peptide methionine sulphoxide reductase MrsB	PFAM	PF01641	SelR	coord: 10..66 e-value: 8.1E-19 score: 67.9
IPR002579	Peptide methionine sulphoxide reductase MrsB	PROSITE	PS51790	MSRB	coord: 7..66 score: 28.255
None	No IPR available	GENE3D	2.170.150.20		coord: 1..66 e-value: 1.0E-22 score: 82.3
None	No IPR available	PANTHER	PTHR43234	FAMILY NOT NAMED	coord: 4..66
None	No IPR available	PANTHER	PTHR43234:SF2		coord: 4..66
IPR011057	Mss4-like superfamily	SUPERFAMILY	51316	Mss4-like	coord: 5..66

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig69627	contig	H-elongata_contig69627:2587..3174 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig69627.14610.1	mRNA_H-elongata_contig69627.14610.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig69627 2587..3174 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig69627.14610.1 ID=prot_H-elongata_contig69627.14610.1|Name=mRNA_H-elongata_contig69627.14610.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=67bp
MCCTKADEVWKNKLRPDQYYVLRMGGTEPAFTSPLNGEKRDGVFVCAGCD
QDLFPSSTKYNSGTGW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002579	Met_Sox_Rdtase_MsrB
IPR011057	Mss4-like_sf