prot_H-elongata_contig69581.14606.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69581.14606.1
Unique Nameprot_H-elongata_contig69581.14606.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length152
Homology
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: D7FH74_ECTSI (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH74_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 3.310e-54
Identity = 84/151 (55.63%), Postives = 115/151 (76.16%), Query Frame = 0
Query:    1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 151
            MA+PG    LR+V+      TV E+YEF+K  F K  +SSECS++CLIY+ERLM+ ARVPLL  TW+P++ C LLLASK+WQD+S WN EFS VYP+Y++K I++LE+ FL A+ WD+++S ++YAKYYF LRS + +  FRRRY  +LQ+
Sbjct:  152 MALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKNINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQI 302          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A6H5JJI4_9PHAE (Cyclin N-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJI4_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 8.390e-52
Identity = 84/151 (55.63%), Postives = 115/151 (76.16%), Query Frame = 0
Query:    1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 151
            MA+PG    LR+V+      TV E+YEF+K  F K  +SSECS++CLIY+ERLM+ ARVPLL  TW+P++ C LLLASK+WQD+S WN EFS VYP+Y++K I++LE+ FL A+ WD+++S ++YAKYYF LRS + +  FRRRY  +LQ+
Sbjct:  400 MALPGVMFTLREVRSPPKAPTVDEIYEFIKTLFNKAQLSSECSLVCLIYVERLMETARVPLLPGTWKPVLLCGLLLASKVWQDLSSWNVEFSTVYPEYSLKSINRLELLFLGAMKWDMSISSSLYAKYYFALRSLTEKEDFRRRYNRVLQI 550          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S1G1W2_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G1W2_9STRA)

HSP 1 Score: 158 bits (400), Expect = 7.970e-47
Identity = 69/131 (52.67%), Postives = 99/131 (75.57%), Query Frame = 0
Query:   21 TVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 151
            T +E+Y F +H F K  +S+ECS++CL+Y+ERLM+VA + LL + WRPI+ C +L+ASK+WQD+S WN EFS VYP Y++  +++LE  FL+ L WDL +S ++YAKYYF LRS S +  FRRRY +++ V
Sbjct:   10 TAEEIYNFARHLFTKAQLSAECSIVCLVYVERLMEVAGLLLLGTNWRPILLCGMLMASKVWQDLSSWNVEFSTVYPQYSLASVNRLERAFLQTLRWDLYISGSVYAKYYFALRSMSEKKNFRRRYISMMAV 140          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A1E7FWS6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWS6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 1.000e-46
Identity = 78/149 (52.35%), Postives = 106/149 (71.14%), Query Frame = 0
Query:    1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 149
            MA PG    LRKV+      +  E+Y+F +  F    +SSECS++CLIY+ERLM++A+VPLL  TWRPI  CALLLASK+WQD+S WN EFS+VYP ++++ I+KLE+ FL  + WDL +S + YAKYYF LRS   +  FR+RY  ++
Sbjct:  125 MARPGMVYGLRKVQVMYRIPSETEIYDFAQQLFQSVQLSSECSIVCLIYVERLMEIAKVPLLACTWRPIFMCALLLASKVWQDLSSWNIEFSSVYPQFSLESINKLELNFLRNVKWDLYISSSSYAKYYFALRSLVEKQDFRQRYNRMV 273          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S4J8M4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J8M4_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.880e-45
Identity = 79/149 (53.02%), Postives = 105/149 (70.47%), Query Frame = 0
Query:    1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 149
            MA PG    LR++K      T  E+YEF    F    +SSECS++CLIYIERLM+VARVPL+ STWRP+  C LLLASK+WQD+S WN EF++VYP ++++ I++LE  FL  + WDL +S ++YAKYYF LRS   +  FRRRY  ++
Sbjct:  926 MARPGAVYGLRRIKDDCSAPTTNEIYEFGHRLFKSVQLSSECSIVCLIYIERLMEVARVPLVSSTWRPVFMCGLLLASKVWQDLSSWNIEFASVYPQFSLEAINRLEATFLRTVKWDLYISSSLYAKYYFALRSLLEKQDFRRRYNRMV 1074          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S4AGI0_9STRA (Hypothetical protein n=2 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AGI0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.820e-44
Identity = 81/151 (53.64%), Postives = 105/151 (69.54%), Query Frame = 0
Query:    1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 151
            MA PG    LRKVK      T  E+Y+F    F    +SSECS++CLIY+ERLM+VA+VPLL  TWRPI  C LLLASK+WQD+S WN EFS+VYP ++++ I+KLE+ FL  + WDL +S + YAKYYF LRS   +  FR+RY  ++ V
Sbjct:  574 MARPGMVYGLRKVKVHYKIPTETEIYDFGHQLFKSVQLSSECSIVCLIYVERLMEVAKVPLLACTWRPIFMCGLLLASKVWQDLSSWNIEFSSVYPQFSLEAINKLELNFLRHVKWDLYISSSCYAKYYFALRSLVEKQDFRQRYNRMVGV 724          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: K0S4R6_THAOC (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S4R6_THAOC)

HSP 1 Score: 164 bits (416), Expect = 2.060e-44
Identity = 77/149 (51.68%), Postives = 106/149 (71.14%), Query Frame = 0
Query:    1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 149
            MA PG   ++RK+K      T  E+YEF    F K  +SSECS++CLIY+E+LM+VA+VPL+  TWRPI  C LLLASK+WQD+S WN EF++VYP +++  I+KLE+ FL+ + WDL +S ++YAKYYF LRS   +  FR RY  ++
Sbjct:  599 MARPGVVYSMRKIKVVHTTPTTDEIYEFAHQLFKKVQLSSECSIVCLIYVEKLMEVAKVPLVAETWRPIFMCGLLLASKVWQDLSSWNIEFASVYPQFSLDAINKLEVLFLKHIKWDLYISSSLYAKYYFALRSLLEKSDFRSRYNGMV 747          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A7S3P0N5_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P0N5_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.840e-44
Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 0
Query:    1 MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLL 149
            MA  G    L+KV+K     +  E+Y+F    F    +SSECS++CLIYIERLM+VA+VPLL STWRPI+ C LLLASK+WQD+S WN EF+ VYP Y++  I +LE++FL  + WDL +S T+YAKYYF LR+   +  FR+RY  ++
Sbjct:  500 MARGGMVGGLKKVRKKHEIPSESEIYDFAHRLFKSVQLSSECSIVCLIYIERLMEVAKVPLLASTWRPIVMCGLLLASKVWQDLSSWNIEFATVYPQYSLNAIHRLELQFLRMVKWDLYISSTLYAKYYFALRALVSKQDFRQRYNRMV 648          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A024GT47_9STRA (Cyclin N-terminal domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GT47_9STRA)

HSP 1 Score: 158 bits (399), Expect = 4.970e-44
Identity = 75/142 (52.82%), Postives = 99/142 (69.72%), Query Frame = 0
Query:   10 LRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 151
            + KV        V+E++ F +H F K  +S EC+++CLIYIERLM+ A VPLL +TW+PI+ C LLLASK+WQD+S WN EF+ +YP Y +  I++LE  FL  + WDL VS T+YAKYYF LRS S +  FRRRY   +QV
Sbjct:  230 MEKVTSKAHVPNVEEIFRFCQHLFQKAQLSPECTIVCLIYIERLMEQADVPLLAATWKPIVLCGLLLASKVWQDLSSWNVEFNCIYPQYPLTCINRLERLFLNQIQWDLYVSATVYAKYYFALRSLSEKKDFRRRYNYTMQV 371          
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Match: A0A835YNR4_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR4_9STRA)

HSP 1 Score: 160 bits (405), Expect = 5.650e-44
Identity = 75/150 (50.00%), Postives = 110/150 (73.33%), Query Frame = 0
Query:    2 AVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYIERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNVKRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQV 151
            A+P    A+ KV+      +V+ +YEF++  F +  +SSECS++CLIYIERLM+VA VPLL +TW+P++ C LLLASK+WQD+S WN EFS VYP+++++ I++LE  +L  + WDL +S ++YAKYYF LRS +    FRRRY  ++Q+
Sbjct:  338 ALPCSAFAMAKVETEPTAPSVEAIYEFIRTLFNRACLSSECSLVCLIYIERLMEVAAVPLLATTWKPVVLCGLLLASKVWQDLSSWNVEFSTVYPEFSLRSINRLEHVYLAQVQWDLYISASLYAKYYFALRSLAEGRDFRRRYNCVVQI 487          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69581.14606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH74_ECTSI3.310e-5455.63Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6H5JJI4_9PHAE8.390e-5255.63Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S1G1W2_9STRA7.970e-4752.67Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A1E7FWS6_9STRA1.000e-4652.35Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S4J8M4_9STRA3.880e-4553.02Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4AGI0_9STRA1.820e-4453.64Hypothetical protein n=2 Tax=Pseudo-nitzschia aust... [more]
K0S4R6_THAOC2.060e-4451.68Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S3P0N5_9STRA2.840e-4452.35Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A024GT47_9STRA4.970e-4452.82Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A835YNR4_9STRA5.650e-4450.00Cyclin N-terminal domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 15..119
e-value: 2.1E-10
score: 40.4
NoneNo IPR availableGENE3D1.10.472.10coord: 12..150
e-value: 1.9E-10
score: 42.7
NoneNo IPR availablePANTHERPTHR14248FAMILY NOT NAMEDcoord: 1..148
NoneNo IPR availablePANTHERPTHR14248:SF37coord: 1..148
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 17..119

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69581contigH-elongata_contig69581:1917..3034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69581.14606.1mRNA_H-elongata_contig69581.14606.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69581 1917..3034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69581.14606.1 ID=prot_H-elongata_contig69581.14606.1|Name=mRNA_H-elongata_contig69581.14606.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=152bp
MAVPGQFCALRKVKKTLVPATVQEVYEFMKHFFVKTHISSECSVICLIYI
ERLMQVARVPLLESTWRPIIFCALLLASKMWQDVSCWNGEFSAVYPDYNV
KRIDKLEMRFLEALGWDLNVSRTIYAKYYFYLRSKSGEITFRRRYKTLLQ
VR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006671Cyclin_N
IPR036915Cyclin-like_sf