prot_H-elongata_contig69568.14603.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig69568.14603.1
Unique Name	prot_H-elongata_contig69568.14603.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	154

Homology

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: D8LFY3_ECTSI (EGF-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY3_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 2.920e-100
Identity = 131/154 (85.06%), Postives = 138/154 (89.61%), Query Frame = 0

Query:    1 LLVRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCSNR 154
            LL  AACPNHCSGHGTCG GA C+CN GWD+APDCSLR CSKG AWADKAYATD AHSEVECSNAGICDR+TG+C CF+PFTGAACQR RCP DCSGHGTCMTIADMSRFYGPDY  PGTGGDG+GP Y NWDA STTACYCDQG+FGADCSNR
Sbjct:   22 LLANAACPNHCSGHGTCGPGAKCTCNSGWDFAPDCSLRTCSKGVAWADKAYATDIAHSEVECSNAGICDRDTGICSCFSPFTGAACQRARCPGDCSGHGTCMTIADMSRFYGPDYTQPGTGGDGIGPSYGNWDAQSTTACYCDQGHFGADCSNR 175

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: F0YK13_AURAN (EGF-like domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK13_AURAN)

HSP 1 Score: 223 bits (567), Expect = 9.360e-72
Identity = 94/151 (62.25%), Postives = 112/151 (74.17%), Query Frame = 0

Query:    2 LVRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCS 152
            +  A CPN CSGHG CG+   CSC  G+DYAPDCSLR CSKG AWADKAYA D AHS  ECSNAG+C+R+TG CECF  +TG ACQR  CP DC+ +G C+T++ + + YG DYDHP  GGDG+GP Y NWD  S T+C+CD G+ G DCS
Sbjct:    8 VALAQCPNMCSGHGDCGAENVCSCFDGFDYAPDCSLRTCSKGIAWADKAYAVDLAHSMAECSNAGLCNRDTGKCECFDGYTGLACQRSACPNDCNANGMCLTLSRLGQLYGVDYDHPSVGGDGVGPSYGNWDKDSVTSCFCDPGFSGPDCS 158

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A835ZG45_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG45_9STRA)

HSP 1 Score: 214 bits (546), Expect = 7.270e-68
Identity = 95/152 (62.50%), Postives = 107/152 (70.39%), Query Frame = 0

Query:    3 VRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCSNR 154
              A CPN CSGHGTCG   TC+CN GW  A DCSLR C  G AWADKAYATD AH++VECS AGICD ETG C+CFTP+ G+ACQR+RCP DCS HG CMT+AD+ R+YG            LG  Y NWD  STT C CD GYFG+DC+ R
Sbjct:   17 ATAVCPNFCSGHGTCGPENTCACNDGWTAAVDCSLRNCPLGAAWADKAYATDKAHADVECSGAGICDGETGECQCFTPYVGSACQRLRCPNDCSSHGVCMTMADVVRYYGA-----------LGSTYDNWDKDSTTMCVCDAGYFGSDCTKR 157

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A7S2HHP1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HHP1_9STRA)

HSP 1 Score: 213 bits (541), Expect = 6.150e-64
Identity = 91/151 (60.26%), Postives = 104/151 (68.87%), Query Frame = 0

Query:    3 VRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCSN 153
            V A CPN CSG GTCG    C C  G++Y+ DCS R C    AWADKAYATD AH+E EC+NAG CDR TG+C+C   +TG AC R RCP DC+G G CMTI  +   YGPDY  PG+GGDG GP YSNWD  S T+C C  GYFG DCS+
Sbjct:   25 VNAQCPNSCSGRGTCGDNNVCDCFDGFEYSADCSQRTCPSAPAWADKAYATDLAHTEAECANAGFCDRSTGLCKCLPGYTGIACNRARCPNDCNGRGICMTIGTLGELYGPDYVQPGSGGDGRGPTYSNWDKSSVTSCVCHAGYFGPDCSS 175

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A7S3ZWQ5_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWQ5_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.830e-63
Identity = 91/146 (62.33%), Postives = 110/146 (75.34%), Query Frame = 0

Query:    7 CPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCS 152
            CPN CSGHG+CG    CSC  G+DYAPDCSLR CSKG AWADKAYA D AHS  ECS+AG+C+R+TG CECF  +TG ACQR  CP DC+ +G C+T++ + + YG D+ HP TGGDG GP Y+NWD  S T+C+CD G+ G DCS
Sbjct:   21 CPNMCSGHGSCGPENVCSCFEGFDYAPDCSLRTCSKGAAWADKAYAVDLAHSPSECSSAGLCNRDTGKCECFDGYTGLACQRSTCPNDCNANGMCLTLSRLGQLYGIDHQHPSTGGDGTGPSYANWDKDSVTSCFCDPGFSGPDCS 166

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A7S2WIH4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WIH4_9STRA)

HSP 1 Score: 206 bits (525), Expect = 5.820e-63
Identity = 89/152 (58.55%), Postives = 106/152 (69.74%), Query Frame = 0

Query:    4 RAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYD-HPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCSNR 154
            +A+CPN CSGHG CG+   C+C+ GW   PDCS R+C    AWAD+AY+ D AH+  ECS AG+CDR  G C CF  +TGAACQR RCP DCSGHG C+T+  + R  G DY   PG GGDG+GPEY+NWDA   T C CD G+FG DCS R
Sbjct:   46 KASCPNQCSGHGACGNENVCTCDDGWVVMPDCSERQCPYDRAWADRAYSDDAAHTLAECSGAGLCDRAQGTCTCFDGYTGAACQRARCPNDCSGHGLCITLGALGRLEGNDYSARPGVGGDGIGPEYTNWDADHVTMCNCDWGFFGPDCSLR 197

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A3F2RSF4_9STRA (EGF-like domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSF4_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.740e-60
Identity = 87/151 (57.62%), Postives = 105/151 (69.54%), Query Frame = 0

Query:    2 LVRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCS 152
            +V AAC N CSGHG CG+   C+C+  W  APDCSLR+C  G AW+DKA A + AH+  ECSN G+CD   G C CF  FTGAACQR+RCP DCSGHG C + A ++  YGPD   PG GGDG+GP Y+NW+  S ++C CD GY G DCS
Sbjct:   24 VVDAACANFCSGHGRCGASNQCTCDPDWALAPDCSLRKCPTGVAWSDKAKAPNVAHANAECSNRGVCDYSKGECTCFNGFTGAACQRLRCPSDCSGHGLCYSSATLALQYGPD-SSPGVGGDGVGPVYTNWEKDSMSSCLCDMGYTGPDCS 173

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A8K1CGE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGE0_PYTOL)

HSP 1 Score: 208 bits (529), Expect = 2.420e-59
Identity = 89/152 (58.55%), Postives = 107/152 (70.39%), Query Frame = 0

Query:    3 VRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCSNR 154
            V A CPN CSGHGTCG+   C+C+  W  APDCSLR+C  G AW+DKA  T+ AH+  ECSN G+CD   G C CF  +TGAACQR+RCP DCSGHG C ++A ++R YGPD   PG GGDG+GP Y NW+  S + C+CD GY G DCS R
Sbjct:   13 VSATCPNFCSGHGTCGASNQCTCDTAWSAAPDCSLRKCPSGVAWSDKASTTNKAHATAECSNRGMCDYTKGECMCFNGYTGAACQRLRCPNDCSGHGLCYSLATLAREYGPD-SLPGVGGDGVGPNYQNWEKDSMSTCFCDTGYNGPDCSQR 163

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A7S0T0J1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T0J1_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.560e-58
Identity = 93/153 (60.78%), Postives = 106/153 (69.28%), Query Frame = 0

Query:    2 LVRAACPNHCSGHGTCGSGATCSCNLGWDY-APDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGT-GGDGLGPEYSNWDAHSTTACYCDQGYFGADCS 152
            ++ +ACPN CSGHGTC  G  C C  GW+  A DCS R+C+ G AWADKAYATD AH   ECSNAGICDR TG+C+CF  FTG+ACQR  CP DCSGHG+C+TI D+S F GP YD      G G G  YS WD  S T C CD G+FG DCS
Sbjct:   27 IIESACPNSCSGHGTCAGGNICQCFTGWNGGAADCSFRQCANGTAWADKAYATDEAHQTTECSNAGICDRSTGLCKCFDGFTGSACQRSVCPNDCSGHGSCLTINDISVFEGPPYDPTSVYKGTGRGSSYSYWDKSSITMCNCDDGFFGPDCS 179

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BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Match: A0A421G501_9STRA (EGF-like domain-containing protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G501_9STRA)

HSP 1 Score: 199 bits (506), Expect = 1.110e-57
Identity = 87/151 (57.62%), Postives = 105/151 (69.54%), Query Frame = 0

Query:    2 LVRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKAYATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGTCMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGADCS 152
            +V AAC N CSGHG CG+   C+C+  W  APDCSLR+C  G AW+DKA A + AH+  ECSN G+CD   G C CF  FTGAACQR+RCP DCSGHG C + A ++  YGPD   PG GGDG+GP Y+NW+  S ++C CD GY G DCS
Sbjct:   24 VVDAACANFCSGHGRCGASNQCTCDPDWALAPDCSLRKCPTGVAWSDKAKAPNVAHANAECSNRGVCDYSKGECTCFNGFTGAACQRLRCPSDCSGHGLCYSSATLALQYGPD-SSPGVGGDGVGPVYTNWEKDSMSSCLCDMGYTGPDCS 173

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot

BLAST of mRNA_H-elongata_contig69568.14603.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LFY3_ECTSI	2.920e-100	85.06	EGF-like domain-containing protein n=1 Tax=Ectocar...	[more]
F0YK13_AURAN	9.360e-72	62.25	EGF-like domain-containing protein (Fragment) n=1 ...	[more]
A0A835ZG45_9STRA	7.270e-68	62.50	EGF-like domain-containing protein n=1 Tax=Tribone...	[more]
A0A7S2HHP1_9STRA	6.150e-64	60.26	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
A0A7S3ZWQ5_9STRA	1.830e-63	62.33	Hypothetical protein n=4 Tax=Pelagomonas calceolat...	[more]
A0A7S2WIH4_9STRA	5.820e-63	58.55	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A3F2RSF4_9STRA	3.740e-60	57.62	EGF-like domain-containing protein n=3 Tax=Phytoph...	[more]
A0A8K1CGE0_PYTOL	2.420e-59	58.55	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A7S0T0J1_9STRA	1.560e-58	60.78	Hypothetical protein n=1 Tax=Chromulina nebulosa T...	[more]
A0A421G501_9STRA	1.110e-57	57.62	EGF-like domain-containing protein (Fragment) n=1 ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 148..154
None	No IPR available	GENE3D	2.10.25.10		coord: 43..154 e-value: 2.4E-6 score: 29.5
None	No IPR available	PANTHER	PTHR14949	EGF-LIKE-DOMAIN, MULTIPLE 7, 8	coord: 6..152
None	No IPR available	PANTHER	PTHR14949:SF38	SCHWANN CELL-SPECIFIC EGF-LIKE REPEAT AUTOCRINE FACTOR	coord: 6..152
IPR000742	EGF-like domain	SMART	SM00181	egf_5	coord: 90..152 e-value: 33.0 score: 10.0 coord: 6..36 e-value: 22.0 score: 12.1 coord: 39..87 e-value: 22.0 score: 12.1
IPR013111	EGF-like domain, extracellular	PFAM	PF07974	EGF_2	coord: 59..86 e-value: 8.3E-7 score: 29.3
IPR008979	Galactose-binding-like domain superfamily	GENE3D	2.60.120.260		coord: 1..38 e-value: 2.0E-6 score: 29.4
IPR013032	EGF-like, conserved site	PROSITE	PS01186	EGF_2	coord: 75..86
IPR013032	EGF-like, conserved site	PROSITE	PS01186	EGF_2	coord: 23..35
IPR013032	EGF-like, conserved site	PROSITE	PS00022	EGF_1	coord: 75..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig69568	contig	H-elongata_contig69568:390..3071 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig69568.14603.1	mRNA_H-elongata_contig69568.14603.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig69568 390..3071 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig69568.14603.1 ID=prot_H-elongata_contig69568.14603.1|Name=mRNA_H-elongata_contig69568.14603.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=154bp
LLVRAACPNHCSGHGTCGSGATCSCNLGWDYAPDCSLRECSKGYAWADKA
YATDTAHSEVECSNAGICDRETGVCECFTPFTGAACQRVRCPEDCSGHGT
CMTIADMSRFYGPDYDHPGTGGDGLGPEYSNWDAHSTTACYCDQGYFGAD
CSNR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000742	EGF-like_dom
IPR013111	EGF_extracell
IPR008979	Galactose-bd-like_sf
IPR013032	EGF-like_CS