prot_H-elongata_contig69340.14581.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69340.14581.1
Unique Nameprot_H-elongata_contig69340.14581.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length146
Homology
[Close]
BLAST of mRNA_H-elongata_contig69340.14581.1 vs. uniprot
Match: D7FIL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIL8_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.430e-21
Identity = 47/82 (57.32%), Postives = 56/82 (68.29%), Query Frame = 0 
Query:   65 LWTAFVKSRSAEDACLGQGPLKKWQAFLEGNSIPDDFRSWYSTQVLGNRSVPQALNVSGLPSGFPEFCHWVSEGHHTSSGKK 146
            LWTAF KSR   +  LG   LKKWQ+F +   +   F  WYS QVLG+RSVPQAL +  LP+GFPEFCHWV+  +HTS G K
Sbjct:  125 LWTAFAKSREGAER-LGFTALKKWQSFAK--DMLKGFPDWYSDQVLGSRSVPQALMIEELPNGFPEFCHWVAAENHTSCGVK 203
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69340.14581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIL8_ECTSI2.430e-2157.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69340contigH-elongata_contig69340:47..955 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69340.14581.1mRNA_H-elongata_contig69340.14581.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69340 47..970 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69340.14581.1 ID=prot_H-elongata_contig69340.14581.1|Name=mRNA_H-elongata_contig69340.14581.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp
MEDSNDTPPPPMRDSSGSESNSPSTDATRAGGVKGAFGKSVKHRAAAESA
SPAAAAFPFDEPPRLWTAFVKSRSAEDACLGQGPLKKWQAFLEGNSIPDD
FRSWYSTQVLGNRSVPQALNVSGLPSGFPEFCHWVSEGHHTSSGKK
back to top