prot_H-elongata_contig69178.14566.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69178.14566.1
Unique Nameprot_H-elongata_contig69178.14566.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: A0A6H5JK39_9PHAE (Cyclin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK39_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 8.000e-105
Identity = 154/169 (91.12%), Postives = 163/169 (96.45%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNISVLPDD 169
            MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMA+ALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSC+VAERMLQEV+MLD+LPSV+ACCAIYVARKNMGRTCWSPTLEKYTKY VE LMPCL EISR+L  EGGDLEAVKKKFSSSKFG+VATM +S+LPDD
Sbjct:  243 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMASALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCYVAERMLQEVSMLDYLPSVVACCAIYVARKNMGRTCWSPTLEKYTKYRVEDLMPCLCEISRVLKQEGGDLEAVKKKFSSSKFGSVATMKVSILPDD 411          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: A0A836CKN2_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN2_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.450e-70
Identity = 111/169 (65.68%), Postives = 137/169 (81.07%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNISVLPDD 169
            +LLASKYEEIYPP+IRDLV++TD+AY ++QIL+ME+ M N L+FR+TVPT YCFLLRYLKAAHAD++IVQLSC+VAERMLQE  ML HLPSV AC AIY+AR+N+GR  WSPTLEKYT Y    L  CL +   ++    GDL+AV+ KF+S +FGAVATM+I +  DD
Sbjct:  222 LLLASKYEEIYPPEIRDLVYMTDKAYTKEQILDMETEMLNRLEFRITVPTTYCFLLRYLKAAHADRRIVQLSCYVAERMLQEARMLRHLPSVAACAAIYLARRNLGRNAWSPTLEKYTGYVEADLASCLRDTCELM-AACGDLKAVRSKFTSKQFGAVATMDIDLSCDD 389          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: F0XYQ7_AURAN (Cyclin N-terminal domain-containing protein (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XYQ7_AURAN)

HSP 1 Score: 202 bits (513), Expect = 2.640e-62
Identity = 91/161 (56.52%), Postives = 127/161 (78.88%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATM 161
            +LLASKYEEIYPP+++DLV+ITD+AY ++QIL ME  M  AL++++T+ +I+CF++RYLKA HAD+++V L+ +VAERMLQE  ML +LPS++A CA+Y+ARKN+GR  WSPTL  Y +Y    L  CL E+S +++   G L+AVKKK+SS K+G VA M
Sbjct:  103 LLLASKYEEIYPPELKDLVYITDKAYTQEQILSMEEKMVKALKYKMTIASIHCFMMRYLKAGHADRRMVWLASYVAERMLQEYAMLKYLPSMVAACAVYIARKNLGRNAWSPTLLHYAQYTESSLRACLEEMSSVIHSTKGSLQAVKKKYSSEKYGQVALM 263          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: A0A7S2E2Y9_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2E2Y9_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.660e-58
Identity = 92/163 (56.44%), Postives = 129/163 (79.14%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNI 163
            +L+ASKYEEIYPP++RDLV+ITD+AY++ +IL ME T+  AL++ +T+ + +CFL+RYLKAAHAD+K+V L+C++ ER LQE  ML +LPS +A  AIY+ARKN+ R+ WSPTL KYT+     L  CL +IS+IL+ +  +L AVKKK+SS+KFG VA+M +
Sbjct:   32 LLVASKYEEIYPPELRDLVYITDKAYSQQEILAMEETILKALEYNVTIASTHCFLVRYLKAAHADRKLVWLACYILERTLQEYHMLKYLPSTVASSAIYLARKNLQRSPWSPTLVKYTQNTESSLRACLEDISQILSAKL-NLTAVKKKYSSTKFGVVASMQL 193          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: A0A836CHW6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHW6_9STRA)

HSP 1 Score: 189 bits (479), Expect = 1.240e-57
Identity = 93/163 (57.06%), Postives = 121/163 (74.23%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNI 163
            +LLASKYEEIYPP++ DLV++TDRA  R+ IL  E  M   L+FRLTVPT+YCFLLRYLKAAHAD+ IVQL+C+++ERML E  ML HLPSV A  A+Y++R+   R  WSPTL +YT YNV  L PCL +I   +     DL A K+KF + +FGAV+++++
Sbjct:   62 LLLASKYEEIYPPEMCDLVYVTDRACAREAILAAERDMLARLEFRLTVPTVYCFLLRYLKAAHADRCIVQLACYISERMLLEARMLRHLPSVAASAAVYLSRRACNRNAWSPTLARYTGYNVAALTPCLRDICEAMR-RPCDLRASKRKFGTREFGAVSSLDV 223          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: B8BZ02_THAPS (Cyclin N-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZ02_THAPS)

HSP 1 Score: 184 bits (466), Expect = 5.690e-55
Identity = 84/164 (51.22%), Postives = 123/164 (75.00%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNIS 164
            +L+ASKYEEIYPP++RDLV+I DRAY++++ILEME  +  +L++++T+P+ + FL+RYLKAAHADKKIVQLSCF+ +  LQ   ML +LPS +A  A+++AR+ +GR  WSPTL KY +Y  E +MP    +    +    +L AV KK++SS++G VA ++IS
Sbjct:  115 LLIASKYEEIYPPELRDLVYICDRAYSKNEILEMEEIILKSLEYQITIPSAHAFLVRYLKAAHADKKIVQLSCFILDGTLQSYNMLHYLPSQLAAAAVFIARRTVGRNAWSPTLLKYAQYREEDIMPVARAVLAEKSSSSTELRAVNKKYTSSRYGGVANISIS 278          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: A0A1E7FEB9_9STRA (Cyclin_N-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEB9_9STRA)

HSP 1 Score: 177 bits (448), Expect = 2.160e-52
Identity = 80/164 (48.78%), Postives = 118/164 (71.95%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNIS 164
            +L+ASKYEEIYPP++RDLV+I DRAY R +I+EME  +   L++ +T+P+ + FL+R+LKAAHADK+IVQLSC++ +  LQ   +L +LPS +A  A+++AR+ +GR  WSPTL KY KY  E +MP    +         +L AV KK++SS++G VA++ +S
Sbjct:  104 LLIASKYEEIYPPELRDLVYICDRAYTRTEIIEMEEKILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCYILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLKYAKYREEDIMPIAKAVMNEKANAAQELRAVNKKYTSSRYGGVASLTLS 267          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: W7TQN9_9STRA (Cyclin n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQN9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 7.290e-51
Identity = 81/163 (49.69%), Postives = 121/163 (74.23%), Query Frame = 0
Query:    2 LLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNIS 164
            L+A KYEEIYPP++++LV++TD AY R QI++ME+ M   L+F++TV T +CFL+R+LKA HAD K+  L+ ++AER LQEV +L  LPS++A  A+Y+ARKN G   WSPTL  YTKY+ + L+PCL  +S  LN     L+A++KK+ ++KF  V+++ ++
Sbjct:  171 LIACKYEEIYPPEVKELVYMTDAAYTRKQIIDMEAFMLATLKFQVTVCTTHCFLVRFLKAGHADNKLYFLASYIAERTLQEVDVLCFLPSMVAAAAVYLARKNCGMRSWSPTLNHYTKYSEDALLPCLRVLSPWLNSRSQTLQAIRKKYGAAKFMMVSSLELT 333          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: A0A7S4AAP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AAP4_9STRA)

HSP 1 Score: 174 bits (440), Expect = 6.480e-50
Identity = 79/161 (49.07%), Postives = 115/161 (71.43%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATM 161
            +L+ASKYEEIYPP++RDLV+I DRAY R +I+EME  +   L++ +T+P+ + FL+RYLKAAHADK+IVQLSCF+ +  LQ   +L +LPS +A  A+++AR+ +GR  WSPTL +Y  Y  E + P    +    +    +L AV KK++SS++GAVA +
Sbjct:  217 LLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRYLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAVYREEEIAPVAKAVMAEKSSAAHELRAVNKKYTSSRYGAVANL 377          
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Match: A0A448ZSV9_9STRA (Cyclin N-terminal domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSV9_9STRA)

HSP 1 Score: 173 bits (439), Expect = 9.790e-50
Identity = 79/164 (48.17%), Postives = 117/164 (71.34%), Query Frame = 0
Query:    1 MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPTIYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYVARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKFSSSKFGAVATMNIS 164
            +L+ASKYEEIYPP++RDLV+I DRAY R +I+EME  +   L++ +T+P+ + FL+R+LKAAHADK+IVQLSCF+ +  LQ   +L +LPS +A  A+++AR+ +GR  WSPTL +Y  Y  E + P    +    +    +L AV KK++SS++GAVA + +S
Sbjct:  220 LLIASKYEEIYPPELRDLVYICDRAYTRKEIIEMEEQILKTLEYNITIPSAHAFLVRFLKAAHADKRIVQLSCFILDGTLQSYNLLHYLPSQLAAAAVFIARRTVGRNSWSPTLLRYAIYREEEIAPIARAVMAEKSSAAHELRAVNKKYTSSRYGAVANLALS 383          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69178.14566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK39_9PHAE8.000e-10591.12Cyclin N-terminal domain-containing protein n=2 Ta... [more]
A0A836CKN2_9STRA1.450e-7065.68Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
F0XYQ7_AURAN2.640e-6256.52Cyclin N-terminal domain-containing protein (Fragm... [more]
A0A7S2E2Y9_9STRA1.660e-5856.44Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A836CHW6_9STRA1.240e-5757.06Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
B8BZ02_THAPS5.690e-5551.22Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A1E7FEB9_9STRA2.160e-5248.78Cyclin_N-domain-containing protein n=1 Tax=Fragila... [more]
W7TQN9_9STRA7.290e-5149.69Cyclin n=2 Tax=Nannochloropsis gaditana TaxID=7252... [more]
A0A7S4AAP4_9STRA6.480e-5049.07Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448ZSV9_9STRA9.790e-5048.17Cyclin N-terminal domain-containing protein n=1 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 49..164
e-value: 3.9E-31
score: 119.4
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 49..161
e-value: 7.9E-27
score: 93.7
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 53..134
e-value: 1.6E-17
score: 74.2
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 1..46
e-value: 2.3E-13
score: 50.0
NoneNo IPR availableGENE3D1.10.472.10coord: 1..47
e-value: 2.6E-51
score: 176.2
NoneNo IPR availableGENE3D1.10.472.10coord: 48..159
e-value: 2.6E-51
score: 176.2
NoneNo IPR availablePANTHERPTHR10177:SF261CYCLIN-B2-1coord: 1..162
IPR039361CyclinPANTHERPTHR10177CYCLINEcoord: 1..162
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 1..46
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 48..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69178contigH-elongata_contig69178:222..1643 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69178.14566.1mRNA_H-elongata_contig69178.14566.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69178 171..2052 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69178.14566.1 ID=prot_H-elongata_contig69178.14566.1|Name=mRNA_H-elongata_contig69178.14566.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
MLLASKYEEIYPPQIRDLVFITDRAYNRDQILEMESTMANALQFRLTVPT
IYCFLLRYLKAAHADKKIVQLSCFVAERMLQEVTMLDHLPSVIACCAIYV
ARKNMGRTCWSPTLEKYTKYNVEHLMPCLTEISRILNLEGGDLEAVKKKF
SSSKFGAVATMNISVLPDDLQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004367Cyclin_C-dom
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR039361Cyclin
IPR036915Cyclin-like_sf