prot_H-elongata_contig69097.14554.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig69097.14554.1
Unique Nameprot_H-elongata_contig69097.14554.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length48
Homology
[Close]
BLAST of mRNA_H-elongata_contig69097.14554.1 vs. uniprot
Match: D7FMP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMP4_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 1.590e-6
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:    1 MSTSRAEATLALLEAERAQLERRLKKVEEEVEVEEALAKKNFREHHHK 48
            MST+RAEATLA+LEAERAQLE RLKKVE+E+  E  L+K+N ++  H+
Sbjct:  144 MSTARAEATLAVLEAERAQLEHRLKKVEDELRQERILSKENNKKRGHR 191
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig69097.14554.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FMP4_ECTSI1.590e-664.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 3..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig69097contigH-elongata_contig69097:97..817 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig69097.14554.1mRNA_H-elongata_contig69097.14554.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig69097 97..844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig69097.14554.1 ID=prot_H-elongata_contig69097.14554.1|Name=mRNA_H-elongata_contig69097.14554.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=48bp
MSTSRAEATLALLEAERAQLERRLKKVEEEVEVEEALAKKNFREHHHK
back to top