prot_H-elongata_contig68940.14536.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig68940.14536.1
Unique Nameprot_H-elongata_contig68940.14536.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 172 bits (437), Expect = 7.250e-53
Identity = 88/102 (86.27%), Postives = 93/102 (91.18%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEKKSGCC 102
            ESF GAKSWVKELQRRGD +VIIALAGNKADLEHRRQVQ +EA  YAEDNGLIHMETSAKSA NVK IFV+IAQKLPKAT+QPEREAFPIM PR E+KSGCC
Sbjct:   94 ESFNGAKSWVKELQRRGDPNVIIALAGNKADLEHRRQVQSEEARLYAEDNGLIHMETSAKSAQNVKSIFVEIAQKLPKATVQPEREAFPIMRPRTEQKSGCC 195          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: A0A835Z7I1_9STRA (Rab5, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 1.090e-49
Identity = 81/102 (79.41%), Postives = 93/102 (91.18%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEKKSGCC 102
            +SF GAKSWVKELQRRGD +V+IALAGNKADLE RRQV F+EAH YAE+NG+IHMETSAKSALNVK IFV+IA++LPKA  QPEREAFPIMPPR++KK+G C
Sbjct:   92 DSFNGAKSWVKELQRRGDPNVVIALAGNKADLEGRRQVHFEEAHAYAEENGIIHMETSAKSALNVKSIFVEIAKRLPKAGAQPEREAFPIMPPRRDKKAGGC 193          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: A0A484DXE7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXE7_BRELC)

HSP 1 Score: 152 bits (385), Expect = 1.330e-45
Identity = 75/103 (72.82%), Postives = 91/103 (88.35%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEK-KSGCC 102
            +SF GAKSWVKELQRRGD +V+IALAGNKADLE RR+V+++EAHQYAEDN ++HMETSAK+A+NVK +FV IA++LPK  +QPEREAFPI PP+  K KSGCC
Sbjct:   45 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEYEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPIQPEREAFPITPPQASKSKSGCC 147          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: A0A662WWK7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWK7_9STRA)

HSP 1 Score: 152 bits (384), Expect = 3.930e-45
Identity = 76/103 (73.79%), Postives = 90/103 (87.38%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEK-KSGCC 102
            +SF GAKSWVKELQRRGD +V+IALAGNKADLE RR+V+F+EAHQYAEDN ++HMETSAK+A+NVK +FV IA++LPK   QPEREAFPI PP+  K KSGCC
Sbjct:   69 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQAAKSKSGCC 171          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: A0A5D6XMY9_9STRA (Uncharacterized protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A5D6XMY9_9STRA)

HSP 1 Score: 152 bits (385), Expect = 6.210e-45
Identity = 76/104 (73.08%), Postives = 90/104 (86.54%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEK--KSGCC 102
            +SF GAKSWVKELQRRGD +V+IALAGNKADLE RR+V+F+EAHQYAEDN ++HMETSAK+A+NVK +FV IA++LPK   QPEREAFPI PP  +K  KSGCC
Sbjct:   95 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPHQPEREAFPITPPTNQKQNKSGCC 198          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: M4B2C3_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2C3_HYAAE)

HSP 1 Score: 155 bits (393), Expect = 1.940e-44
Identity = 77/103 (74.76%), Postives = 91/103 (88.35%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEK-KSGCC 102
            ESF GAKSWVKELQRRGD +V+IALAGNKADLE RR+V+F+EAHQYAEDN ++HMETSAK+A+NVK +FV IA++LPK  +QPEREAFPI PP+  K KSGCC
Sbjct:  244 ESFSGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPIQPEREAFPITPPQASKSKSGCC 346          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: B8BUG2_THAPS (Canine-like rab-type small G protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BUG2_THAPS)

HSP 1 Score: 151 bits (381), Expect = 2.170e-44
Identity = 72/101 (71.29%), Postives = 90/101 (89.11%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEKKSGC 101
            +SF GAKSWVKELQRRGDQ V+IA+AGNKADLE RRQV F+EA+ YAE+NG++HMETSAK+A NVK +FV+IA++LPK+T QP+REAFPIMP +QE ++ C
Sbjct:   93 DSFAGAKSWVKELQRRGDQDVVIAMAGNKADLEARRQVDFEEANAYAEENGILHMETSAKNANNVKALFVEIARRLPKSTQQPDREAFPIMPQKQESRNCC 193          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: A0A0W8DMJ6_PHYNI (Intraflagellar Transport protein 80 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DMJ6_PHYNI)

HSP 1 Score: 152 bits (385), Expect = 2.970e-44
Identity = 76/103 (73.79%), Postives = 90/103 (87.38%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEK-KSGCC 102
            +SF GAKSWVKELQRRGD +V+IALAGNKADLE RR+V+F+EAHQYAEDN ++HMETSAK+A+NVK +FV IA++LPK   QPEREAFPI PP+  K KSGCC
Sbjct:  151 DSFTGAKSWVKELQRRGDPNVVIALAGNKADLEARRKVEFEEAHQYAEDNDILHMETSAKTAVNVKDLFVAIAKRLPKNPPQPEREAFPITPPQASKSKSGCC 253          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: A0A7S0CFN9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CFN9_9STRA)

HSP 1 Score: 147 bits (371), Expect = 7.550e-44
Identity = 70/101 (69.31%), Postives = 90/101 (89.11%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEKKSGC 101
            +SF GAKSWVKELQRRGD +V+IALAGNKADL+ RR+V+F+EA+ YAE+NG++H+ETSAK++ NVK +FV+IAQKLPK   QPEREAFP+M P+QEK++ C
Sbjct:   19 DSFAGAKSWVKELQRRGDPNVVIALAGNKADLDSRRKVEFEEANAYAEENGILHLETSAKNSNNVKSLFVEIAQKLPKNPPQPEREAFPLMAPKQEKRACC 119          
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Match: A0A7R9WE53_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WE53_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.330e-43
Identity = 72/101 (71.29%), Postives = 88/101 (87.13%), Query Frame = 0
Query:    1 ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDNGLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEKKSGC 101
            +SF GAKSWVKELQRRGD +V+IALAGNKADLE RR+V+F+EA+ YAE+NG++H+ETSAK+A NVK +FV+IA+KLPK   QPEREAFPI P RQE +S C
Sbjct:   26 DSFAGAKSWVKELQRRGDPNVVIALAGNKADLESRRKVEFEEANAYAEENGILHLETSAKNASNVKALFVEIAKKLPKNPPQPEREAFPITPQRQENRSCC 126          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig68940.14536.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC7_ECTSI7.250e-5386.27Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z7I1_9STRA1.090e-4979.41Rab5, rab family GTPase n=1 Tax=Tribonema minus Ta... [more]
A0A484DXE7_BRELC1.330e-4572.82Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A662WWK7_9STRA3.930e-4573.79Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A5D6XMY9_9STRA6.210e-4573.08Uncharacterized protein n=23 Tax=Oomycota TaxID=47... [more]
M4B2C3_HYAAE1.940e-4474.76Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
B8BUG2_THAPS2.170e-4471.29Canine-like rab-type small G protein n=2 Tax=Thala... [more]
A0A0W8DMJ6_PHYNI2.970e-4473.79Intraflagellar Transport protein 80 n=1 Tax=Phytop... [more]
A0A7S0CFN9_9STRA7.550e-4469.31Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7R9WE53_9STRA1.330e-4371.29Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 19..32
score: 46.9
coord: 54..76
score: 36.74
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..79
e-value: 4.0E-8
score: -8.2
NoneNo IPR availableGENE3D3.40.50.300coord: 1..102
e-value: 5.8E-21
score: 76.7
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..83
NoneNo IPR availablePANTHERPTHR24073:SF852RAB5B, MEMBER RAS ONCOGENE FAMILYcoord: 1..83
NoneNo IPR availablePROSITEPS51419RABcoord: 1..102
score: 13.976
IPR001806Small GTPasePFAMPF00071Rascoord: 1..76
e-value: 1.3E-18
score: 67.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig68940contigH-elongata_contig68940:967..3133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig68940.14536.1mRNA_H-elongata_contig68940.14536.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig68940 967..3133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig68940.14536.1 ID=prot_H-elongata_contig68940.14536.1|Name=mRNA_H-elongata_contig68940.14536.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
ESFGGAKSWVKELQRRGDQSVIIALAGNKADLEHRRQVQFDEAHQYAEDN
GLIHMETSAKSALNVKKIFVKIAQKLPKATMQPEREAFPIMPPRQEKKSG
CC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase